BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0215.0003.p         (161 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG61037.1|AF322013_156 NfeC [Bradyrhizobium japonicum]            218   2e-55
ref|NP_768707.1| nodulate formation efficiency C protein [Bradyr...   218   2e-55
gb|AAB31119.1| nfeC [Bradyrhizobium japonicum]                        212   2e-53
gb|AAL35754.1| nodulate formation efficiency C protein [Bradyrhi...   211   3e-53
ref|YP_577427.1| nodulate formation efficiency C protein [Nitrob...   166   1e-39

>gb|AAG61037.1|AF322013_156 NfeC [Bradyrhizobium japonicum]
          Length = 283

 Score =  218 bits (556), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 104/145 (71%), Positives = 115/145 (79%)

Query: 1   MELSWRAFALSLIAGEVADGEKNVNLRFLHDPTNFNFVTTAQGKLGNLLGHGRCTIVEPV 60
           MEL WRA ALSLIA EVADGE++ NLRFLHDP NFNFVTT QG+LG+LL  GRCTI+EPV
Sbjct: 137 MELGWRALALSLIASEVADGERDANLRFLHDPANFNFVTTPQGRLGDLLRQGRCTIIEPV 196

Query: 61  SVDCLPKVDENQATKGDLWRVLLLVNCNIPGPRYFTRKGVITFEKREGQEWEPQSFLAKR 120
            VD LPK ++  A KG +WRVLLLVNC+I GPRYFT  GVITFEKREGQ+WEPQS  AKR
Sbjct: 197 GVDYLPKRNDKPAEKGGVWRVLLLVNCSIQGPRYFTHNGVITFEKREGQDWEPQSSFAKR 256

Query: 121 IATFPPGSWFDHIEPDERDVLERAR 145
           IA FPPGSWF   EP E + L   R
Sbjct: 257 IAKFPPGSWFQRTEPKEEEDLGEPR 281


>ref|NP_768707.1| nodulate formation efficiency C protein [Bradyrhizobium japonicum
           USDA 110]
 dbj|BAC47332.1| nodulate formation efficiency C protein [Bradyrhizobium japonicum
           USDA 110]
          Length = 275

 Score =  218 bits (556), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 104/145 (71%), Positives = 115/145 (79%)

Query: 1   MELSWRAFALSLIAGEVADGEKNVNLRFLHDPTNFNFVTTAQGKLGNLLGHGRCTIVEPV 60
           MEL WRA ALSLIA EVADGE++ NLRFLHDP NFNFVTT QG+LG+LL  GRCTI+EPV
Sbjct: 129 MELGWRALALSLIASEVADGERDANLRFLHDPANFNFVTTPQGRLGDLLRQGRCTIIEPV 188

Query: 61  SVDCLPKVDENQATKGDLWRVLLLVNCNIPGPRYFTRKGVITFEKREGQEWEPQSFLAKR 120
            VD LPK ++  A KG +WRVLLLVNC+I GPRYFT  GVITFEKREGQ+WEPQS  AKR
Sbjct: 189 GVDYLPKRNDKPAEKGGVWRVLLLVNCSIQGPRYFTHNGVITFEKREGQDWEPQSSFAKR 248

Query: 121 IATFPPGSWFDHIEPDERDVLERAR 145
           IA FPPGSWF   EP E + L   R
Sbjct: 249 IAKFPPGSWFQRTEPKEEEDLGEPR 273


>gb|AAB31119.1| nfeC [Bradyrhizobium japonicum]
          Length = 275

 Score =  212 bits (539), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 102/145 (70%), Positives = 113/145 (77%)

Query: 1   MELSWRAFALSLIAGEVADGEKNVNLRFLHDPTNFNFVTTAQGKLGNLLGHGRCTIVEPV 60
           MEL WRA ALSLIA EVADGE++ NLRFLHDP NFNFVTT QG+LG+LL  GRCTI+EPV
Sbjct: 129 MELGWRALALSLIASEVADGERDANLRFLHDPANFNFVTTPQGRLGDLLRQGRCTIIEPV 188

Query: 61  SVDCLPKVDENQATKGDLWRVLLLVNCNIPGPRYFTRKGVITFEKREGQEWEPQSFLAKR 120
            VD LPK ++  A KG +WRVLLLVNC+I GPRYFT  GVITFEKREGQ+WEPQS  AKR
Sbjct: 189 GVDYLPKRNDKPAEKGGVWRVLLLVNCSIQGPRYFTHNGVITFEKREGQDWEPQSSFAKR 248

Query: 121 IATFPPGSWFDHIEPDERDVLERAR 145
           IA F  GSWF   EP E + L   R
Sbjct: 249 IAKFKNGSWFQRTEPKEEEDLGEPR 273


>gb|AAL35754.1| nodulate formation efficiency C protein [Bradyrhizobium japonicum]
          Length = 275

 Score =  211 bits (538), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/145 (69%), Positives = 112/145 (77%)

Query: 1   MELSWRAFALSLIAGEVADGEKNVNLRFLHDPTNFNFVTTAQGKLGNLLGHGRCTIVEPV 60
           MEL WRA ALSLIA EVADGE++ NLRFLHDP NFNFV T QG+LG+LL  GRCTI+EPV
Sbjct: 129 MELGWRALALSLIASEVADGERDANLRFLHDPANFNFVATPQGRLGDLLRQGRCTIIEPV 188

Query: 61  SVDCLPKVDENQATKGDLWRVLLLVNCNIPGPRYFTRKGVITFEKREGQEWEPQSFLAKR 120
            VD LPK +   A  GD+WRVLLLVNC+I GPRYF   GVITFEKREGQ+WEPQS  AKR
Sbjct: 189 GVDYLPKRNGKPAETGDVWRVLLLVNCSIQGPRYFAHNGVITFEKREGQDWEPQSSFAKR 248

Query: 121 IATFPPGSWFDHIEPDERDVLERAR 145
           IA F PGSWF   EP+E + L   R
Sbjct: 249 IAKFAPGSWFQRTEPNEEEDLGERR 273


>ref|YP_577427.1| nodulate formation efficiency C protein [Nitrobacter hamburgensis
           X14]
 gb|ABE62967.1| nodulate formation efficiency C protein [Nitrobacter hamburgensis
           X14]
          Length = 262

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 80/152 (52%), Positives = 103/152 (67%), Gaps = 2/152 (1%)

Query: 1   MELSWRAFALSLIAGEVADGEKNVNLRFLHDPTNFNFVTTAQGKLGNLLGHGRCTIVEPV 60
           MEL WR FALSLIA EVAD     N+ FL D +N++FV TAQG LG+LL  GRCTI  PV
Sbjct: 113 MELGWRPFALSLIAREVADDYPQPNVSFLRDTSNYDFVATAQGGLGDLLKKGRCTIGNPV 172

Query: 61  SVDCLPKVDENQATKGDLWRVLLLVNCNIPGPRYFTRKGVITFEKREGQEWEPQSFLAKR 120
           S++ +  V  ++A+K DLWR+ L V+C I GP YFTR+G+I F+K+    W+P SF A+R
Sbjct: 173 SLEYV--VLSDKASKDDLWRLQLSVDCKITGPSYFTRQGIIIFKKKNRDAWQPASFFARR 230

Query: 121 IATFPPGSWFDHIEPDERDVLERARKASANER 152
           IA +PPG WF+  EPDE+   +  RK     R
Sbjct: 231 IAKYPPGHWFEQEEPDEKRTFDAVRKVLKGTR 262