BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0214.0029.p (374 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07031458.1| Pyridoxal-dependent decarboxylase [Acidobacte... 432 e-119 ref|ZP_01853293.1| decarboxylase, group II [Planctomyces maris D... 224 2e-56 ref|YP_004039135.1| pyridoxal-dependent decarboxylase [Methylovo... 203 4e-50 ref|YP_003050464.1| Pyridoxal-dependent decarboxylase [Methylovo... 202 6e-50 ref|YP_002763095.1| putative decarboxylase [Gemmatimonas auranti... 198 1e-48 >ref|ZP_07031458.1| Pyridoxal-dependent decarboxylase [Acidobacterium sp. MP5ACTX8] gb|EFI55684.1| Pyridoxal-dependent decarboxylase [Acidobacterium sp. MP5ACTX8] Length = 515 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 208/356 (58%), Positives = 261/356 (73%), Gaps = 1/356 (0%) Query: 2 FAAFIGWAPGSFEMVTTSGASLANMTAALVARNRYLSGSWNGGLAAGRSTXPAIAIGQDA 61 FA IGW P + +M+TTSG SLAN+TA L ARN L SW G+ R+ PAIA+G D Sbjct: 148 FARRIGWDPDTCDMITTSGGSLANLTAVLAARNDRLYASWKTGVTR-RNGTPAIAVGDDI 206 Query: 62 HFSVSRIAGIIGIGQNQVIRLPLNDRRQICPERAAATLDEAATQGLDIFCLIASAGTTAI 121 H+SV R+ GIIGIGQ+ +IRLPLNDRRQIC RA L EA +G DIFCL+ SAGTT + Sbjct: 207 HYSVCRVPGIIGIGQDNIIRLPLNDRRQICVRRAIPILREALAEGKDIFCLVISAGTTPV 266 Query: 122 GANDPLPDLAALAKRRGAWLHVDAAHNGAFLVSDRLRPRLAGLELADSFCLDAHKALFVP 181 GA DPL +LA A+ G WLHVDAAH GAFL+S+RLRPRL G+E ADSFC+DAHK LFVP Sbjct: 267 GAIDPLEELADFAEEHGIWLHVDAAHCGAFLLSERLRPRLRGIERADSFCIDAHKTLFVP 326 Query: 182 ALCTLLFYREKGLAETAFPQKDSYVFDPFEDEMTAVQSGVKNFECTKRPAILNLWLAWSL 241 ALCTLLFYR++ A AF Q+ SYVFD E+ MT +SG KNFECTKRPAILNLWL W++ Sbjct: 327 ALCTLLFYRDRAKARGAFSQEASYVFDHHENSMTRFESGAKNFECTKRPAILNLWLIWAM 386 Query: 242 YGPRAFADKLERLVMMTEAAHQYLADQPDFIVPYRPESNILCFVHQPLGVCGNRLSSLQL 301 +GP+ A KLE LV +T A+ YL+ PDF + PE+NILCF ++P G+ ++S LQL Sbjct: 387 FGPQVIAQKLEYLVDLTWDAYSYLSSLPDFATVHEPEANILCFEYKPKGLDSIQISELQL 446 Query: 302 ELRNRVRAAGRYLLSKVDMDGRTMLRMVLMNHRIGLSDIAGMVGEIRRHAREILAS 357 LR+ +R GR+ +SKV+++GR +LR+V+MNH I + IA ++ EIR A EI+ S Sbjct: 447 ALRDAIRDGGRFFISKVEIEGRNVLRIVMMNHEIEMDHIAALIFEIRSRAAEIMKS 502 >ref|ZP_01853293.1| decarboxylase, group II [Planctomyces maris DSM 8797] gb|EDL60700.1| decarboxylase, group II [Planctomyces maris DSM 8797] Length = 522 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 124/352 (35%), Positives = 184/352 (52%), Gaps = 3/352 (0%) Query: 6 IGWAPGSFEMVTTSGASLANMTAALVARNRYLSGSWNGGLAAGRSTXPAIAIGQDAHFSV 65 IG+ PG+F + T G SLAN+T L ARN W+ G A P I + DAH+SV Sbjct: 155 IGFTPGTFAGLVTHGGSLANLTGLLAARNLKCPELWSQGPQAKLDAAPVILVSSDAHYSV 214 Query: 66 SRIAGIIGIGQNQVIRLPLNDRRQICPERAAATLDEAATQGLDIFCLIASAGTTAIGAND 125 +R AGI+GIG + +I++PL++RR++ P + + I ++A A T IGA D Sbjct: 215 TRSAGILGIGADNIIKVPLDERRKMNPAALQQLILTCQAENKTIIAVVACACATPIGAFD 274 Query: 126 PLPDLAALAKRRGAWLHVDAAHNGAFLVSDRLRPRLAGLELADSFCLDAHKALFVPALCT 185 PL ++A L ++ WLHVDAAH G S + + AGL ADS DAHK +F+PAL Sbjct: 275 PLNEIADLCEQHDLWLHVDAAHGGPTCFSQQHQHLTAGLHRADSVVFDAHKMMFMPALSA 334 Query: 186 LLFYREKGLAETAFPQKDSYVFDPFEDEMTAVQSGVKNFECTKRPAILNLWLAWSLYGPR 245 LFY+ K +AF Q+ +Y+FDP E+ G++ ECTKR LW WSL+G Sbjct: 335 FLFYKNKAYQFSAFQQQAAYLFDPSAPEIAEYDIGLRTIECTKRANSYALWGIWSLFGKN 394 Query: 246 AFADKLERLVMMTEAAHQYLADQPDFIVPYRPESNILCFVHQP--LGVCGNRLSSL-QLE 302 FAD ++ T + L DF + PE NI+ F +Q L +L + Sbjct: 395 LFADLVDITFATTRTFYDLLQQASDFTPLHEPECNIVVFRYQSDWLNALSREQQNLFHFK 454 Query: 303 LRNRVRAAGRYLLSKVDMDGRTMLRMVLMNHRIGLSDIAGMVGEIRRHAREI 354 LR ++ +G + + ++ + R+ +MN + ++ IR A E+ Sbjct: 455 LRRQLIESGEFYIVHSVINEQAAFRITVMNPLTTEVQLNQLLNTIRHRADEL 506 >ref|YP_004039135.1| pyridoxal-dependent decarboxylase [Methylovorus sp. MP688] gb|ADQ83899.1| Pyridoxal-dependent decarboxylase [Methylovorus sp. MP688] Length = 488 Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 115/328 (35%), Positives = 175/328 (53%), Gaps = 5/328 (1%) Query: 5 FIGWAPGSFEMVTTSGASLANMTAALVARNRYLSGSWNGGLAAGRSTXPAIAIGQDAHFS 64 IGW + TSG + AN+TA L AR ++ + W G+A + I + + AH+S Sbjct: 142 LIGWQDAGG--ILTSGGAQANLTALLAAR-QHAADVWKHGVADVKPLR--ILVSEHAHYS 196 Query: 65 VSRIAGIIGIGQNQVIRLPLNDRRQICPERAAATLDEAATQGLDIFCLIASAGTTAIGAN 124 +SR AGI+G+G + V+ +P + ++ A E + ++A+AG T G+ Sbjct: 197 ISRAAGIMGLGTDAVVSIPTDTEGRMLVNALAVAHAEVLANDTTVMAVVATAGCTPTGSI 256 Query: 125 DPLPDLAALAKRRGAWLHVDAAHNGAFLVSDRLRPRLAGLELADSFCLDAHKALFVPALC 184 DPL ++ + G WLHVD AH + L+S++ RP L G+ LADS D HK L++PA Sbjct: 257 DPLLEIGRYCQDHGLWLHVDGAHGASALLSEQHRPALQGIALADSVVWDGHKLLYMPAAV 316 Query: 185 TLLFYREKGLAETAFPQKDSYVFDPFEDEMTAVQSGVKNFECTKRPAILNLWLAWSLYGP 244 + + +R + AF Q SY+F E + ECTKR L LW+A+SLYG Sbjct: 317 SAVLFRNTASSFEAFSQDASYLFQGGEHIEEMYNVSYRTLECTKRMMGLKLWVAFSLYGV 376 Query: 245 RAFADKLERLVMMTEAAHQYLADQPDFIVPYRPESNILCFVHQPLGVCGNRLSSLQLELR 304 R A L+ Q L PDF + +P++NI+CF H+P + G L + Q LR Sbjct: 377 RGMAQLLDSAFAKARLLAQKLEVHPDFELLMQPQTNIVCFRHRPTALEGPALDAHQSRLR 436 Query: 305 NRVRAAGRYLLSKVDMDGRTMLRMVLMN 332 ++ +GR+ L++V ++GR LR LMN Sbjct: 437 EQLVQSGRFHLTRVTLEGRVWLRTTLMN 464 >ref|YP_003050464.1| Pyridoxal-dependent decarboxylase [Methylovorus glucosetrophus SIP3-4] gb|ACT49937.1| Pyridoxal-dependent decarboxylase [Methylovorus glucosetrophus SIP3-4] Length = 488 Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 118/352 (33%), Positives = 185/352 (52%), Gaps = 5/352 (1%) Query: 5 FIGWAPGSFEMVTTSGASLANMTAALVARNRYLSGSWNGGLAAGRSTXPAIAIGQDAHFS 64 IGW + TSG + AN+TA L AR ++ + W G+A + I + + AH+S Sbjct: 142 LIGWQDAGG--ILTSGGAQANLTALLAAR-QHAADVWKHGVADVKPLR--ILVSEHAHYS 196 Query: 65 VSRIAGIIGIGQNQVIRLPLNDRRQICPERAAATLDEAATQGLDIFCLIASAGTTAIGAN 124 +SR AGI+G+G + V+ +P + ++ A EA + ++A+AG T G+ Sbjct: 197 ISRAAGIMGLGTDAVVSIPTDTEGRMLVNALAVAHAEALANDTTVMAVVATAGCTPTGSI 256 Query: 125 DPLPDLAALAKRRGAWLHVDAAHNGAFLVSDRLRPRLAGLELADSFCLDAHKALFVPALC 184 DPL ++ + G WLHVD AH + L+S++ RP L G+ LADS D HK L++PA Sbjct: 257 DPLLEIGRYCQDHGLWLHVDGAHGASALLSEQHRPALEGIALADSVVWDGHKLLYMPAAV 316 Query: 185 TLLFYREKGLAETAFPQKDSYVFDPFEDEMTAVQSGVKNFECTKRPAILNLWLAWSLYGP 244 + + +R + AF Q SY+F E + ECTKR L LW+A+SLYG Sbjct: 317 SAVLFRNTASSFEAFSQDASYLFQGGEHIEEMYNVSYRTLECTKRMMGLKLWVAFSLYGA 376 Query: 245 RAFADKLERLVMMTEAAHQYLADQPDFIVPYRPESNILCFVHQPLGVCGNRLSSLQLELR 304 R A L+ Q L DF + +P++NI+CF H+P + G L + Q LR Sbjct: 377 RGMAQLLDSAFAKARLLAQKLDAHADFELLMQPQTNIVCFRHRPTALEGPALDAHQSRLR 436 Query: 305 NRVRAAGRYLLSKVDMDGRTMLRMVLMNHRIGLSDIAGMVGEIRRHAREILA 356 ++ +GR+ L++V ++GR LR LMN D+ ++ + + ++ LA Sbjct: 437 EQLVQSGRFHLTRVTLEGRVWLRTTLMNPYTQAEDMDELLLALNQLGQQALA 488 >ref|YP_002763095.1| putative decarboxylase [Gemmatimonas aurantiaca T-27] dbj|BAH40625.1| putative decarboxylase [Gemmatimonas aurantiaca T-27] Length = 492 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 127/363 (34%), Positives = 187/363 (51%), Gaps = 17/363 (4%) Query: 5 FIGW---APGSFEMVTTSGASLANMTAALVARNRYLSGSWNGGLAAGRSTXPAIAIGQDA 61 +GW A G+ TSG + A +TA L AR+R + W G+ A + P + G+ A Sbjct: 139 LVGWDDRAGGTM----TSGGTEATLTALLAARSRAIPDVWTNGVGA---SPPVLLCGEHA 191 Query: 62 HFSVSRIAGIIGIGQNQVIRLPLNDRRQICPERAAATLDEAATQGLDIFCLIASAGTTAI 121 H++VSR AG +G+G ++V+ +P + R P L +G+ + ++A+AG TA Sbjct: 192 HYAVSRAAGEMGLGLSRVLAIPSDGFRMSVPA-LREQLQSLRERGISVMAVVATAGCTAT 250 Query: 122 GANDPLPDLAAL----AKRRGA-WLHVDAAHNGAFLVSDRLRPRLAGLELADSFCLDAHK 176 GA D L +A L A RG WLHVDAAH G L+S R RL GL A S D HK Sbjct: 251 GAFDDLNAVADLCDEFADERGPLWLHVDAAHGGGALLSPTHRHRLDGLARAQSLAWDPHK 310 Query: 177 ALFVPALCTLLFYREKGLAETAFPQKDSYVFDPFEDEMTAVQSGVKNFECTKRPAILNLW 236 L +P +L +++ + ETAF Q+ Y+F P D G ++F+C++R +L LW Sbjct: 311 TLLLPLAAGMLLVKDERVLETAFAQQAPYLFTPTGDA-RGWDMGPRSFQCSRRSDVLKLW 369 Query: 237 LAWSLYGPRAFADKLERLVMMTEAAHQYLADQPDFIVPYRPESNILCFVHQPLGVCGNRL 296 + + YG A +RL M A + L P F + PESNILCF P GV Sbjct: 370 VVFQRYGANALGALYDRLCRMARALYDQLDGHPSFRALHEPESNILCFAWYPDGVADADR 429 Query: 297 SSLQLELRNRVRAAGRYLLSKVDMDGRTMLRMVLMNHRIGLSDIAGMVGEIRRHAREILA 356 L LR R +GR ++ ++GR +LR+ +MN R + I +V + A+++L Sbjct: 430 DDLTNRLRERYNRSGRGWITATTLNGRRVLRITVMNARTDVMHIEALVRGLEAEAQQVLK 489 Query: 357 SNA 359 A Sbjct: 490 HPA 492