BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0214.0016.p         (187 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_783278.1| hypothetical protein RPE_4374 [Rhodopseudomonas...   182   3e-44
ref|ZP_08520143.1| flavodoxin reductase family 1 protein [Aeromo...    37   1.1  
ref|ZP_01909789.1| hypothetical protein PPSIR1_17270 [Plesiocyst...    37   1.4  
ref|YP_001875922.1| carbamoyl-phosphate synthase, small subunit ...    36   2.4  
ref|YP_003519592.1| YliB [Pantoea ananatis LMG 20103] >gi|291151...    36   3.1  

>ref|YP_783278.1| hypothetical protein RPE_4374 [Rhodopseudomonas palustris BisA53]
 gb|ABJ08298.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 1011

 Score =  182 bits (461), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 87/187 (46%), Positives = 125/187 (66%), Gaps = 1/187 (0%)

Query: 1    LQNVLFSYMPHLFVSSLAATLIGQNLYGFNKQVARIQDDNDSFSMRSSSGTIRTWFERDG 60
             +N  FSYMP+L +  L A ++G+NLYGFNKQ+A I  D DSFS+RSS GT+  WFER G
Sbjct: 825  FRNTRFSYMPNLMLDWLPAVIVGKNLYGFNKQLASICADGDSFSIRSSGGTMSAWFERVG 884

Query: 61   VPGGIDSYLVIKQIRDKLDQPLVGVQPDGNFIYSMLKYGLGGAVVQPIKGKIALSSPFAH 120
             PG + S+  I+ I+D L+ PL+G++ DG+F+YS  ++GL GA  QP+KG + L+ PF  
Sbjct: 885  PPGRLSSHESIRAIQDMLNDPLIGLKEDGSFVYSFPRFGLKGATCQPVKGIVNLNRPFVS 944

Query: 121  KAEEIELAPISKPPQKDDAWGFRFIAPWTLSLPFNFPAGRPSSSARNLARATGEYSTALL 180
             A  +EL P+++  Q+   WGFR I+ W+L+ PF+ P  +  +S+ NL R   EY+ A L
Sbjct: 945  PARSLELQPLTEQDQR-YPWGFRLISRWSLTSPFSLPFDQSHASSNNLRRVAAEYTDAFL 1003

Query: 181  GRILVRR 187
            G +  RR
Sbjct: 1004 GGVPFRR 1010


>ref|ZP_08520143.1| flavodoxin reductase family 1 protein [Aeromonas caviae Ae398]
          Length = 600

 Score = 37.4 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 79  DQPLVGVQPDGNFIYSMLKYGLGGAVVQPIKGKIALSSPFAHKAEEIELAPISKPPQKDD 138
           D+  + V+PDG FI +     L   V  P++G + L  P       +E A  S+ PQ   
Sbjct: 33  DRRYMVVKPDGTFITARTHPQLQQVVATPVEGGLQLRYPGLPPLALME-AAFSRAPQHTG 91

Query: 139 AWGFRFIA 146
            WG RF A
Sbjct: 92  VWGDRFTA 99


>ref|ZP_01909789.1| hypothetical protein PPSIR1_17270 [Plesiocystis pacifica SIR-1]
 gb|EDM77232.1| hypothetical protein PPSIR1_17270 [Plesiocystis pacifica SIR-1]
          Length = 301

 Score = 37.0 bits (84), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 27/48 (56%)

Query: 8   YMPHLFVSSLAATLIGQNLYGFNKQVARIQDDNDSFSMRSSSGTIRTW 55
           + P+LFV S    L G+++YGF K +AR +  + S      S T+ TW
Sbjct: 109 FAPYLFVDSCYPLLAGRDVYGFPKALARFELPSMSEQPARFSATVTTW 156


>ref|YP_001875922.1| carbamoyl-phosphate synthase, small subunit [Elusimicrobium minutum
           Pei191]
 gb|ACC98585.1| Carbamoyl-phosphate synthase, small subunit [Elusimicrobium minutum
           Pei191]
          Length = 390

 Score = 36.2 bits (82), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 15/85 (17%)

Query: 8   YMPHLFVSSLAATLIGQNLYGFNKQVARIQDDNDSFSMRSSSGTIRTWFERDGVPG--GI 65
           +MPH + S+           G   Q   + D  D          I+TW + +GVPG  GI
Sbjct: 81  FMPHGYESA-----------GIKTQGIIVSDTFDDCFHYEKGNNIKTWMKDNGVPGIAGI 129

Query: 66  DSYLVIKQIRDKLDQPLVG-VQPDG 89
           D+  +++ IRD    PL G + P+G
Sbjct: 130 DTRYLVQMIRDS-KGPLFGRIVPEG 153


>ref|YP_003519592.1| YliB [Pantoea ananatis LMG 20103]
 gb|ADD76464.1| YliB [Pantoea ananatis LMG 20103]
          Length = 511

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 5/107 (4%)

Query: 14  VSSLAATLIGQNLYGFNKQVARIQDDNDSFSMRSSSGTIRTWFERDGVPGGIDSYLVIKQ 73
           +S   A    Q L+GF+K + RI    DS+ + S  G   T     GV     +    + 
Sbjct: 49  LSQAVAKSFYQGLFGFDKDMKRINVLADSYQV-SEDGLTYTIKLHSGVKFQDGTDFNAEA 107

Query: 74  IRDKLDQPLVGVQPDGNFI-YSMLKYGLGGAVVQPIKGKIALSSPFA 119
           ++  LD+      PD +   Y++ KY      V P+  KI L  PF+
Sbjct: 108 VKANLDR---ASNPDNHLKRYNLFKYIASTEAVDPVTVKITLKQPFS 151