BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0214.0009.p (275 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772994.1| ABC transporter permease protein [Bradyrhizobiu... 517 e-145 ref|ZP_08872676.1| binding-protein-dependent transport systems i... 400 e-109 ref|YP_995600.1| binding-protein-dependent transport systems inn... 370 e-100 ref|NP_396334.2| ABC transporter, membrane spanning protein (sug... 337 2e-90 ref|YP_345171.1| ABC sugar transporter, inner membrane subunit [... 322 4e-86 >ref|NP_772994.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51619.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 275 Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust. Identities = 262/275 (95%), Positives = 269/275 (97%) Query: 1 MTDAANTDRWIRWLNTVQLVLAGVLIMAPTVWMVLSSFKPSFEVTAYPPTLIFTPTLDNY 60 M DAANTDRWIRWLNT+QLV+AGVLIMAPTVWMVLSSFKPSFEVTAYPPTL F+PTLDNY Sbjct: 1 MNDAANTDRWIRWLNTLQLVIAGVLIMAPTVWMVLSSFKPSFEVTAYPPTLTFSPTLDNY 60 Query: 61 VELTKTTPFLSYALNSLIVTVGSTALGLLFGIPAAFAVSWTRISWPAILTLAARMAPGTL 120 VELTKTTPFLSYALNSLIVTVGSTA GLLFGIPAAFAVSWTRI+WPAILTLAARMAPGTL Sbjct: 61 VELTKTTPFLSYALNSLIVTVGSTAFGLLFGIPAAFAVSWTRITWPAILTLAARMAPGTL 120 Query: 121 FLLPWYVMFRQIGMIGSYTALILSHAVITLPIVIWVLLPSFDGIPRSVFEAAQVDGCSVT 180 FLLPWYVMFRQ+GMIGSYTALILSHAVITLPIVIWVLLPSFD IPRSVFEAAQVDGC V Sbjct: 121 FLLPWYVMFRQVGMIGSYTALILSHAVITLPIVIWVLLPSFDAIPRSVFEAAQVDGCRVA 180 Query: 181 RILWRIALPLVASGVAVSAILAFVFSWNYFLFALVLSNGDTKTLIAAAFNFIGEGSTQWG 240 RILWRIA+PLVASG+AVSAILAFVFSWNYFLFALVLSNGDTKTLIAAAFNFIGEGSTQWG Sbjct: 181 RILWRIAMPLVASGIAVSAILAFVFSWNYFLFALVLSNGDTKTLIAAAFNFIGEGSTQWG 240 Query: 241 ALMAAATLIALPPLVLAALVQRWLVSGLTLGAVKG 275 ALMAAATLIALPPLVLAALVQRWLVSGLTLGAVKG Sbjct: 241 ALMAAATLIALPPLVLAALVQRWLVSGLTLGAVKG 275 >ref|ZP_08872676.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter sp. At4] Length = 271 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 204/270 (75%), Positives = 232/270 (85%), Gaps = 1/270 (0%) Query: 7 TDRWIRWLNTVQLVLAGVLIMAPTVWMVLSSFKPSFEVTAYPPTLIFTPTLDNYVELTKT 66 DR + LN +Q+ +LI+ P WM+LSSFKPS EVTAYPP LIF+PTL+NY L T Sbjct: 2 NDRLVLRLNLLQIAFVALLILLPIAWMLLSSFKPSAEVTAYPPKLIFSPTLENYRTLFGT 61 Query: 67 TPFLSYALNSLIVTVGSTALGLLFGIPAAFAVSWTRISWPAILTLAARMAPGTLFLLPWY 126 TPFL YA NS ++T+GSTA+GLL GIPAAF+VSWTRI+WPA +TL ARMAPGTLFLLPWY Sbjct: 62 TPFLHYAWNSTVITLGSTAIGLLLGIPAAFSVSWTRITWPATVTLLARMAPGTLFLLPWY 121 Query: 127 VMFRQIGMIGSYTALILSHAVITLPIVIWVLLPSFDGIPRSVFEAAQVDGC-SVTRILWR 185 VMFR+ GMIGSY ALIL+HA ITLPIVIWVLLP FD IPR+V E+AQVDGC SV RILWR Sbjct: 122 VMFREAGMIGSYGALILTHAAITLPIVIWVLLPFFDNIPRNVLESAQVDGCSSVPRILWR 181 Query: 186 IALPLVASGVAVSAILAFVFSWNYFLFALVLSNGDTKTLIAAAFNFIGEGSTQWGALMAA 245 IALPLV GV V+AIL+FVFSWNYFLFALVLSNGD+KTLIAA+FNFIGEG++ WGALMAA Sbjct: 182 IALPLVMPGVVVAAILSFVFSWNYFLFALVLSNGDSKTLIAASFNFIGEGASNWGALMAA 241 Query: 246 ATLIALPPLVLAALVQRWLVSGLTLGAVKG 275 ATLIALPPLVLA +VQR LVSGL++GAVKG Sbjct: 242 ATLIALPPLVLAFIVQRRLVSGLSMGAVKG 271 >ref|YP_995600.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gb|ABM56582.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 269 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 190/247 (76%), Positives = 210/247 (85%) Query: 29 PTVWMVLSSFKPSFEVTAYPPTLIFTPTLDNYVELTKTTPFLSYALNSLIVTVGSTALGL 88 P WM+LSSFKPS +VTAYPP L F PTL+NY L TPFL Y NS ++T GSTA+GL Sbjct: 23 PIAWMLLSSFKPSAQVTAYPPRLWFGPTLENYRTLFAGTPFLRYTWNSTVITAGSTAIGL 82 Query: 89 LFGIPAAFAVSWTRISWPAILTLAARMAPGTLFLLPWYVMFRQIGMIGSYTALILSHAVI 148 L G AAFAVSWTRI+WPA +TL ARMAPGTLFLLPWYVMFR+ GMIGSY ALIL+HA I Sbjct: 83 LLGTAAAFAVSWTRITWPATVTLLARMAPGTLFLLPWYVMFREAGMIGSYWALILTHAAI 142 Query: 149 TLPIVIWVLLPSFDGIPRSVFEAAQVDGCSVTRILWRIALPLVASGVAVSAILAFVFSWN 208 T+PIVIWVLLP FDGIPRS+ E+AQVDGCSV RILWRIALPLV GV V++ILAFVFSWN Sbjct: 143 TMPIVIWVLLPFFDGIPRSMLESAQVDGCSVPRILWRIALPLVLPGVVVASILAFVFSWN 202 Query: 209 YFLFALVLSNGDTKTLIAAAFNFIGEGSTQWGALMAAATLIALPPLVLAALVQRWLVSGL 268 YFLFALVLSN +T+TLIAA+FNFIGEG+ WGALMAAATLIALPPLVLA +VQR LVSGL Sbjct: 203 YFLFALVLSNSETRTLIAASFNFIGEGAANWGALMAAATLIALPPLVLAFIVQRRLVSGL 262 Query: 269 TLGAVKG 275 GAVKG Sbjct: 263 ATGAVKG 269 >ref|NP_396334.2| ABC transporter, membrane spanning protein (sugar) [Agrobacterium tumefaciens str. C58] gb|AAK90775.2| ABC transporter, membrane spanning protein (sugar) [Agrobacterium tumefaciens str. C58] Length = 277 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 167/269 (62%), Positives = 208/269 (77%), Gaps = 3/269 (1%) Query: 7 TDRWIRWLNTVQLVLAGVLIMAPTVWMVLSSFKPSFEVTAYPPTLIFTPTLDNYVELTKT 66 T+R L+TV LV+A + P +WM+LSSFK +EVT PP+L FTPTLDNY +L + Sbjct: 12 TERLRGGLSTVILVIAAI---TPILWMILSSFKDRYEVTKLPPSLFFTPTLDNYRQLFER 68 Query: 67 TPFLSYALNSLIVTVGSTALGLLFGIPAAFAVSWTRISWPAILTLAARMAPGTLFLLPWY 126 T FLS LNSLIV+ G+T LG++ PAAFAVSW R +WPA L L +RMAPGTLFLLPW+ Sbjct: 69 TEFLSNTLNSLIVSTGATLLGIMLAFPAAFAVSWHRTTWPATLALFSRMAPGTLFLLPWF 128 Query: 127 VMFRQIGMIGSYTALILSHAVITLPIVIWVLLPSFDGIPRSVFEAAQVDGCSVTRILWRI 186 ++F ++G++GSYT LIL+HAVI +P+ +W +LP FD +PR + EAAQ+DGC +LWRI Sbjct: 129 IIFSELGLVGSYTVLILTHAVIAMPVALWTMLPYFDAMPRELVEAAQMDGCRPLSVLWRI 188 Query: 187 ALPLVASGVAVSAILAFVFSWNYFLFALVLSNGDTKTLIAAAFNFIGEGSTQWGALMAAA 246 LP+V GV VS+IL F+F+WNYFLFAL LS DTKT I A+FNFIGEG T WGALMAAA Sbjct: 189 VLPVVMPGVVVSSILCFIFTWNYFLFALALSGFDTKTAIVASFNFIGEGVTNWGALMAAA 248 Query: 247 TLIALPPLVLAALVQRWLVSGLTLGAVKG 275 T+IALPPL+L LVQR LV+GL+ GAVKG Sbjct: 249 TMIALPPLILTLLVQRRLVAGLSAGAVKG 277 >ref|YP_345171.1| ABC sugar transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] ref|YP_002524264.1| ABC sugar transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gb|ABA81430.1| ABC sugar transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gb|ACM04230.1| ABC sugar transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 270 Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 161/264 (60%), Positives = 196/264 (74%), Gaps = 1/264 (0%) Query: 12 RWLNTVQLVLAGVLIMAPTVWMVLSSFKPSFEVTAYPPTLIFTPTLDNYVELTKTTPFLS 71 RW +T + +L M+P +WM LSS K EVTAYPP L+FTPT NY EL T FL Sbjct: 8 RW-STPVFTIGALLFMSPILWMALSSLKSPQEVTAYPPKLLFTPTAGNYAELFGRTDFLH 66 Query: 72 YALNSLIVTVGSTALGLLFGIPAAFAVSWTRISWPAILTLAARMAPGTLFLLPWYVMFRQ 131 NS +V ST LGL+ IPAAFA+SW R+ WPA ++L ARMAPGTLFLLPW++MF + Sbjct: 67 NTFNSFVVAGASTLLGLVIAIPAAFAISWHRMVWPATVSLFARMAPGTLFLLPWFIMFSK 126 Query: 132 IGMIGSYTALILSHAVITLPIVIWVLLPSFDGIPRSVFEAAQVDGCSVTRILWRIALPLV 191 +GM G YTALIL+HAVIT+P+ +W+LLP D PR + E+ Q+DGC IL R+ LP++ Sbjct: 127 LGMAGGYTALILAHAVITMPLALWILLPYLDATPREIVESGQIDGCRSGTILIRLVLPMI 186 Query: 192 ASGVAVSAILAFVFSWNYFLFALVLSNGDTKTLIAAAFNFIGEGSTQWGALMAAATLIAL 251 G+ V+ I++FVFSWNYFLFAL LS DTKT I A+FNFIGEG+T WGALMAAAT+IAL Sbjct: 187 YPGIVVATIMSFVFSWNYFLFALALSGFDTKTAIVASFNFIGEGTTNWGALMAAATVIAL 246 Query: 252 PPLVLAALVQRWLVSGLTLGAVKG 275 PPLVL VQRWLVSGL+ GAVKG Sbjct: 247 PPLVLTFTVQRWLVSGLSFGAVKG 270