BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0214.0007.p (252 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772995.1| ABC transporter permease protein [Bradyrhizobiu... 337 8e-91 ref|YP_995601.1| binding-protein-dependent transport systems inn... 189 3e-46 ref|ZP_08872675.1| binding-protein-dependent transport systems i... 186 4e-45 ref|NP_396335.2| ABC transporter, membrane spanning protein (sug... 132 7e-29 ref|YP_345170.1| ABC sugar transporter, inner membrane subunit [... 129 3e-28 >ref|NP_772995.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51620.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 313 Score = 337 bits (865), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 170/190 (89%), Positives = 176/190 (92%), Gaps = 8/190 (4%) Query: 1 MSDTAATLTQDRQRLEMSALSAPAVIFTVAMIAFPVVYTIWLGFQNFSSTGKQSFAGLAN 60 MSDTAATLTQDRQ+LEM+ALSAPAV+FTVAMIAFPVVYTIWLGFQ FS+TGKQSFAGLAN Sbjct: 19 MSDTAATLTQDRQKLEMAALSAPAVVFTVAMIAFPVVYTIWLGFQTFSTTGKQSFAGLAN 78 Query: 61 YSKLISDYEFWHGLWVTIALYVLSLVLQLVFGVWLALVLFHAKRLPGIVRSLFISPFMMP 120 YSKLISD EFWHGLWVTIAL+VLSL LQLVFG+WLALVLFHAKRLPGIVRSLFISPFMMP Sbjct: 79 YSKLISDVEFWHGLWVTIALFVLSLALQLVFGIWLALVLFHAKRLPGIVRSLFISPFMMP 138 Query: 121 PVVA--------XPSLGAANYILQSFGLPPSDWLASPTWVIPTVALIDSWQWTPYVALIV 172 PVVA PSLGAANYILQS GLPPSDWLASPTWVIPTVALIDSWQWTPYVALIV Sbjct: 139 PVVAGMMWLVILDPSLGAANYILQSVGLPPSDWLASPTWVIPTVALIDSWQWTPYVALIV 198 Query: 173 LGGLQSLPPS 182 LGGLQSLP S Sbjct: 199 LGGLQSLPTS 208 >ref|YP_995601.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gb|ABM56583.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 299 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 107/177 (60%), Positives = 131/177 (74%), Gaps = 8/177 (4%) Query: 14 RLEMSALSAPAVIFTVAMIAFPVVYTIWLGFQNFSSTGKQSFAGLANYSKLISDYEFWHG 73 R +++ LS PAV+FT AMIAFP YT+W +S K F NY +L D EFW+G Sbjct: 18 RGQLACLSLPAVVFTSAMIAFPFAYTVWFSLHEYSFGAKPRFNFGMNYVELAGDGEFWNG 77 Query: 74 LWVTIALYVLSLVLQLVFGVWLALVLFHAKRLPGIVRSLFISPFMMPPVVA--------X 125 L +T+ LY+LSL LQLV G W+AL+L +A++L GIVR+L ISPF++PPVV Sbjct: 78 LRITLLLYLLSLALQLVLGTWVALLLHNARKLSGIVRTLMISPFVLPPVVVGMMWLVLLD 137 Query: 126 PSLGAANYILQSFGLPPSDWLASPTWVIPTVALIDSWQWTPYVALIVLGGLQSLPPS 182 PS+GA NY+LQ+ GLP SDWLASP WVIPTVALID+WQWTP+VALIVLGGLQSLPPS Sbjct: 138 PSIGAVNYLLQAAGLPRSDWLASPVWVIPTVALIDTWQWTPFVALIVLGGLQSLPPS 194 >ref|ZP_08872675.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter sp. At4] Length = 289 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 111/199 (55%), Positives = 139/199 (69%), Gaps = 10/199 (5%) Query: 14 RLEMSALSAPAVIFTVAMIAFPVVYTIWLGFQNFSSTGKQSFAGLANYSKLISDYEFWHG 73 R +++ LS PAV+FT AMIAFP YT+W + K + NY +L D EFW+G Sbjct: 8 RGQLAFLSLPAVLFTTAMIAFPFAYTVWFSLHEYRFGDKPKLSFGMNYVELAGDGEFWNG 67 Query: 74 LWVTIALYVLSLVLQLVFGVWLALVLFHAKRLPGIVRSLFISPFMMPPVVA--------X 125 L +T+ALY+LSLVLQLV G W+AL+L +++L G VR+L ISPF++PPVV Sbjct: 68 LRITLALYLLSLVLQLVLGTWVALLLHGSRKLSGTVRTLMISPFVLPPVVVGMMWLVVLD 127 Query: 126 PSLGAANYILQSFGLPPSDWLASPTWVIPTVALIDSWQWTPYVALIVLGGLQSLPPS--G 183 PS+GAANY+L+S GLP SDWLASP WVIPTVALID+WQWTPYVALIVLGGLQSLPP+ Sbjct: 128 PSIGAANYLLESVGLPRSDWLASPAWVIPTVALIDTWQWTPYVALIVLGGLQSLPPTVYE 187 Query: 184 TSRPSSASLCRCCCRPSSP 202 ++ AS R R + P Sbjct: 188 AAQIDGASRWRTFWRITLP 206 >ref|NP_396335.2| ABC transporter, membrane spanning protein (sugar) [Agrobacterium tumefaciens str. C58] gb|AAK90776.2| ABC transporter, membrane spanning protein (sugar) [Agrobacterium tumefaciens str. C58] Length = 297 Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 69/155 (44%), Positives = 92/155 (59%), Gaps = 8/155 (5%) Query: 20 LSAPAVIFTVAMIAFPVVYTIWLGFQNFSSTGKQSFAGLANYSKLISDYEFWHGLWVTIA 79 + APAV F MI FP++Y IWL + S F GLANY +L+SD EF + +T Sbjct: 22 MMAPAVAFVGLMIVFPILYAIWLSLRENSLGMDDRFVGLANYVELLSDGEFHNAFILTWV 81 Query: 80 LYVLSLVLQLVFGVWLALVLFHAKRLPGIVRSLFISPFMMPPVVA--------XPSLGAA 131 LY L+L +Q+V G WL L + +VR+ I PFMMPPVV P++G A Sbjct: 82 LYGLALAMQMVIGTWLGFTLNRVRSARNLVRTAAIMPFMMPPVVVGMMAIVILDPAVGVA 141 Query: 132 NYILQSFGLPPSDWLASPTWVIPTVALIDSWQWTP 166 N++L G+ PS WLA P WV+ TVA +D+WQW+P Sbjct: 142 NWLLGQVGIGPSLWLADPKWVLLTVAAVDTWQWSP 176 >ref|YP_345170.1| ABC sugar transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] ref|YP_002524263.1| ABC sugar transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] gb|ABA81429.1| ABC sugar transporter, inner membrane subunit [Rhodobacter sphaeroides 2.4.1] gb|ACM04229.1| ABC sugar transporter, inner membrane subunit [Rhodobacter sphaeroides KD131] Length = 278 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 86/166 (51%), Positives = 112/166 (67%), Gaps = 11/166 (6%) Query: 23 PAVIFTVAMIAFPVVYTIWLGFQNFSSTGKQSFAGLANYSKLISDYEFWHGLWVTIALYV 82 PAV+ T+AM+ FP+ + I+L + G GL +YS+L++D FW L VT+ L+V Sbjct: 9 PAVVMTLAMVIFPLGFAIYL---SLGGNGTLPALGLGHYSRLVADPAFWSALRVTLVLFV 65 Query: 83 LSLVLQLVFGVWLALVLFHAKRLPGIVRSLFISPFMMPPVVA--------XPSLGAANYI 134 ++LVLQLV G LAL L + G+VR+ +SPFM+PPVV P LGAAN+I Sbjct: 66 VALVLQLVLGTALALALNRYNVVRGLVRTAILSPFMLPPVVVGMIAIVVLDPGLGAANWI 125 Query: 135 LQSFGLPPSDWLASPTWVIPTVALIDSWQWTPYVALIVLGGLQSLP 180 L+S GLP WLASP W + VALID+WQWTP+VALIVLGGLQ+LP Sbjct: 126 LESLGLPHFLWLASPRWSLLVVALIDTWQWTPFVALIVLGGLQALP 171