BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0214.0006.p (433 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772996.1| ABC transporter substrate-binding protein [Brad... 845 0.0 ref|YP_995602.1| extracellular solute-binding protein [Vermineph... 558 e-157 ref|ZP_08872674.1| extracellular solute-binding protein [Vermine... 554 e-156 ref|YP_345169.1| ABC sugar transporter, periplasmic lignad bindi... 330 3e-88 ref|YP_002524262.1| ABC sugar transporter, periplasmic lignad bi... 328 8e-88 >ref|NP_772996.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51621.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 446 Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/431 (93%), Positives = 419/431 (97%), Gaps = 1/431 (0%) Query: 1 MKARMLATHVALPVLAIVAVSAQARAADFDWMKFKGRTVTFLANNNPVAQALLTYKADFE 60 MKARMLATHVALPVLAI AVSAQA AADFDWMKFKG+TV FLANNNPV+QALLTY+ADFE Sbjct: 15 MKARMLATHVALPVLAI-AVSAQAHAADFDWMKFKGKTVIFLANNNPVSQALLTYRADFE 73 Query: 61 KLTGMTLKVDGYQEQQMRQRLVTVMNANSDEVDVFMTLPSREGEQFAAAGWYGDLTAMAR 120 KLTGMTLKVDGYQEQQMRQRLVTVMNANSDEVDV+MTLPSREGEQFAAAGWY DLTAMA+ Sbjct: 74 KLTGMTLKVDGYQEQQMRQRLVTVMNANSDEVDVYMTLPSREGEQFAAAGWYADLTAMAK 133 Query: 121 NEVAKEYDPAGLSQALLKAATFGGKLTSMPMNIEGPIFYYRTDIFKKCGIEAPKTIKEVE 180 N+VAK+YDPAGLSQALLKAATF GKLTSMPMN+EGPIFYYRTDIFKKCG+EAPKTIK+VE Sbjct: 134 NDVAKDYDPAGLSQALLKAATFNGKLTSMPMNLEGPIFYYRTDIFKKCGLEAPKTIKDVE 193 Query: 181 AAAEKIKTCDSAVTPFVSRGLKPAVAYTFSNMLHNIGGSYIAGGKSNLCSAKGKEALDTY 240 AAAEKIKTCDS VTPFVSRGLKPAVAYTFSNMLHNIGG+Y+A GKSNLCSAKGKEALDTY Sbjct: 194 AAAEKIKTCDSTVTPFVSRGLKPAVAYTFSNMLHNIGGTYMADGKSNLCSAKGKEALDTY 253 Query: 241 SRLLRDFGPPGVVNYSFQQISALYRSGRAAMAFESSNELRTVMEGGARLKDTGLLPFPAG 300 SRLLRDFGPPGVVNYSFQQISALYR GRAAMAFESSNELRTVMEGGARLKDTGLLPFPAG Sbjct: 254 SRLLRDFGPPGVVNYSFQQISALYRGGRAAMAFESSNELRTVMEGGARLKDTGLLPFPAG 313 Query: 301 EAGQVPTTIGWGMAVSSHSKQPDAAWYFVQWATSPEVQKKMALQGIAPPRPSVAKDPEYR 360 +AGQVPTTIGWGMAVSSHSKQPD AWYFVQWATSPEVQKKMALQGIAPPRPSVA DPEYR Sbjct: 314 DAGQVPTTIGWGMAVSSHSKQPDVAWYFVQWATSPEVQKKMALQGIAPPRPSVANDPEYR 373 Query: 361 KWIDEEPVRKEWQGALDVLATKGSSEVGYPIIANPESREFIGQAVQDLILKQKSVDQACA 420 KWIDEEPVRKEWQ ALDVLATKGSSEVGYPI+ANP+SREFIGQAVQDLILKQK +DQACA Sbjct: 374 KWIDEEPVRKEWQAALDVLATKGSSEVGYPIVANPQSREFIGQAVQDLILKQKPIDQACA 433 Query: 421 DADKALDALIA 431 DADKALDALI+ Sbjct: 434 DADKALDALIS 444 >ref|YP_995602.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM56584.1| extracellular solute-binding protein, family 1 [Verminephrobacter eiseniae EF01-2] Length = 434 Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust. Identities = 259/430 (60%), Positives = 329/430 (76%), Gaps = 1/430 (0%) Query: 4 RMLATHVALPVLAIVAVSAQARAADFDWMKFKGRTVTFLANNNPVAQALLTYKADFEKLT 63 R + H V+AI+ A A DF+W K +G+T+TFLANNNPVA ALL Y+ +FE+ T Sbjct: 6 RCPSLHALAAVVAILCAGATG-AQDFNWKKHQGKTLTFLANNNPVANALLKYQGEFEQQT 64 Query: 64 GMTLKVDGYQEQQMRQRLVTVMNANSDEVDVFMTLPSREGEQFAAAGWYGDLTAMARNEV 123 GMTLKVD YQEQQMRQRLVTVMNA SDEVDVFM+LPSREG QFA AGWY DL + ++ Sbjct: 65 GMTLKVDAYQEQQMRQRLVTVMNARSDEVDVFMSLPSREGLQFAKAGWYADLAELLKSAS 124 Query: 124 AKEYDPAGLSQALLKAATFGGKLTSMPMNIEGPIFYYRTDIFKKCGIEAPKTIKEVEAAA 183 A++YD GLS +++ AT+G +LT +PMN+EGP+ YYR D+ +KCG+ P+++ +EA A Sbjct: 125 ARDYDATGLSAGMIRDATYGKQLTGIPMNVEGPVLYYRKDLLRKCGLALPESLTGLEAVA 184 Query: 184 EKIKTCDSAVTPFVSRGLKPAVAYTFSNMLHNIGGSYIAGGKSNLCSAKGKEALDTYSRL 243 K+K C+ + PFVSRGLKPA+ +T S L N+GG Y+ G+S LCS G+ +L Y+RL Sbjct: 185 AKLKRCEPGIAPFVSRGLKPALPFTHSVFLRNMGGQYMKDGRSQLCSQAGQASLALYARL 244 Query: 244 LRDFGPPGVVNYSFQQISALYRSGRAAMAFESSNELRTVMEGGARLKDTGLLPFPAGEAG 303 L+D+GPPGVVNY+F QIS+LY+ G+AAMAFESSNELR +M+GGARLKDT + PAG G Sbjct: 245 LKDYGPPGVVNYNFYQISSLYKEGKAAMAFESSNELRNMMDGGARLKDTAVAVLPAGPGG 304 Query: 304 QVPTTIGWGMAVSSHSKQPDAAWYFVQWATSPEVQKKMALQGIAPPRPSVAKDPEYRKWI 363 PT IGW M+VS+HSK +AAWYFVQWATSP +Q ++AL GIAPPR +VA+ P Y+ W+ Sbjct: 305 SRPTVIGWIMSVSAHSKHKEAAWYFVQWATSPAIQARLALDGIAPPRAAVAQAPGYKAWM 364 Query: 364 DEEPVRKEWQGALDVLATKGSSEVGYPIIANPESREFIGQAVQDLILKQKSVDQACADAD 423 DE+PVR EW A++ LA G+SEVGYPI ANP SRE IGQAV +L+L QK QACADAD Sbjct: 365 DEQPVRSEWVAAVNELARTGTSEVGYPIAANPASRELIGQAVTELLLGQKLPAQACADAD 424 Query: 424 KALDALIAQK 433 + LDALIA++ Sbjct: 425 RQLDALIAKE 434 >ref|ZP_08872674.1| extracellular solute-binding protein [Verminephrobacter sp. At4] Length = 434 Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust. Identities = 253/405 (62%), Positives = 320/405 (79%) Query: 28 DFDWMKFKGRTVTFLANNNPVAQALLTYKADFEKLTGMTLKVDGYQEQQMRQRLVTVMNA 87 +F W K +G+T+TFLANNNPVA ALL YKADFE+ TGM LKVD YQEQQMRQRLVTVMNA Sbjct: 29 EFHWRKHQGKTLTFLANNNPVANALLKYKADFEQQTGMVLKVDSYQEQQMRQRLVTVMNA 88 Query: 88 NSDEVDVFMTLPSREGEQFAAAGWYGDLTAMARNEVAKEYDPAGLSQALLKAATFGGKLT 147 SDEVDVFM+LPSREG QFA AGWY +L+ + RN AK+YD A LS +LK AT+ +L+ Sbjct: 89 RSDEVDVFMSLPSREGMQFARAGWYANLSDLVRNASAKDYDFADLSAGMLKDATYDQQLS 148 Query: 148 SMPMNIEGPIFYYRTDIFKKCGIEAPKTIKEVEAAAEKIKTCDSAVTPFVSRGLKPAVAY 207 +PMN+EGP+ YYR D+F+KCG+ PK++ E++A + ++K C VTPFVSRGL+ A+ + Sbjct: 149 GIPMNVEGPVLYYRKDLFQKCGVTLPKSLPELDAVSAQLKRCVPGVTPFVSRGLRSALPF 208 Query: 208 TFSNMLHNIGGSYIAGGKSNLCSAKGKEALDTYSRLLRDFGPPGVVNYSFQQISALYRSG 267 T+S LHN+GG Y+ GKS LCS +G+ +L Y++LL+D+GPPGVVNY+F Q S+LY+ G Sbjct: 209 TYSVFLHNMGGQYLRDGKSQLCSKEGQASLALYAKLLKDYGPPGVVNYNFYQTSSLYKEG 268 Query: 268 RAAMAFESSNELRTVMEGGARLKDTGLLPFPAGEAGQVPTTIGWGMAVSSHSKQPDAAWY 327 RAAMAFESSNELR +M+GGARL DT + PAG G PT IGW M+VS+HS+ +AAWY Sbjct: 269 RAAMAFESSNELRNLMDGGARLNDTAVAVLPAGPGGSHPTVIGWTMSVSAHSRHKEAAWY 328 Query: 328 FVQWATSPEVQKKMALQGIAPPRPSVAKDPEYRKWIDEEPVRKEWQGALDVLATKGSSEV 387 FVQWATSP +Q K+AL G+AP R +VAK P Y+ W+DE+PVR EW A++ L+ G+SEV Sbjct: 329 FVQWATSPAIQAKLALDGVAPARSAVAKSPGYKAWMDEQPVRAEWVAAVNELSRTGTSEV 388 Query: 388 GYPIIANPESREFIGQAVQDLILKQKSVDQACADADKALDALIAQ 432 GYPI+ANP SR+FIGQA +L+L QK+ QACADADK LDALIA+ Sbjct: 389 GYPIVANPASRDFIGQAATELLLGQKTPAQACADADKQLDALIAK 433 >ref|YP_345169.1| ABC sugar transporter, periplasmic lignad binding protein [Rhodobacter sphaeroides 2.4.1] gb|ABA81428.1| ABC sugar transporter, periplasmic lignad binding protein [Rhodobacter sphaeroides 2.4.1] Length = 429 Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 170/403 (42%), Positives = 241/403 (59%), Gaps = 6/403 (1%) Query: 28 DFDWMKFKGRTVTFLANNNPVAQALLTYKADFEKLTGMTLKVDGYQEQQMRQRLVTVMNA 87 +FDW K +G T+ + NN Q + F + TG+ ++ + + E+Q R RL T++ Sbjct: 21 EFDWRKHEGETINVMLNNLAWTQLMRDRIEAFTEATGIRVRAETFSEEQYRTRLTTLLQG 80 Query: 88 NSDEVDVFMTLPSREGEQFAAAGWYGDLTAMARNEVAK-EYDPAGLSQALLKAATFGGKL 146 S E+DVFMTLPSRE FA+ GWY DL + + E YD S AL ++ G + Sbjct: 81 GSSELDVFMTLPSREAPLFASNGWYADLAPLLKGEATDPAYDYDDFSAALRQSGVVGETI 140 Query: 147 TSMPMNIEGPIFYYRTDIFKKCGIEAPKTIKEVEAAAEKIKTCDSAVTPFVSRGLKPAVA 206 TS+P+N+EGP+FY+R DIF+KC +E P+ ++++ AAAEKI+ CDSA+TP+ +RGL+ V Sbjct: 141 TSVPINVEGPLFYWRRDIFEKCNVEKPEYLEDLPAAAEKIRACDSAITPWAARGLRGTVG 200 Query: 207 YTFSNMLHNIGGSYI-AGGKSNLCSAKGKEALDTYSRLLRDFGPPGVVNYSFQQISALYR 265 Y ++N+GG ++ A GK++LC + LD Y +LRD+GPPG N++F Q+ L Sbjct: 201 YPLGAFVYNMGGDFMDADGKASLCLPGTIKGLDLYGSMLRDYGPPGATNHTFTQVMDLLG 260 Query: 266 SGRAAMAFESSNELRTVMEGGARLKDTGLLPFPAG-EAGQV-PTTIGWGMAVSSHSKQPD 323 GR AM ESSNE T+M+ R +D G+ P G E+G P I W +AVS S+ + Sbjct: 261 QGRVAMTNESSNEFSTLMKHEGRAEDIGVDVLPGGRESGTSKPVVINWSLAVSGLSENKE 320 Query: 324 AAWYFVQWATSPEVQKKMALQGIAPPRPSVAKDPEYRKWIDEEPVRKEWQGALDVLATKG 383 AAWYFVQWAT E Q+ +A QGIAP R SV +R W E R EW AL ++ G Sbjct: 321 AAWYFVQWATGAENQEALATQGIAPSRVSVFNGEGFRNWASESRPRGEWLEALLEISQTG 380 Query: 384 SSEVGYP-IIANPESREFIGQAVQDLILKQKSVDQ-ACADADK 424 SS P + PE+RE + VQ ++L Q + ACA D+ Sbjct: 381 SSLYQTPSLTRTPEAREILSNVVQQIVLGQTDAETAACAVTDE 423 >ref|YP_002524262.1| ABC sugar transporter, periplasmic lignad binding protein [Rhodobacter sphaeroides KD131] gb|ACM04228.1| ABC sugar transporter, periplasmic lignad binding protein [Rhodobacter sphaeroides KD131] Length = 429 Score = 328 bits (842), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 167/403 (41%), Positives = 239/403 (59%), Gaps = 6/403 (1%) Query: 28 DFDWMKFKGRTVTFLANNNPVAQALLTYKADFEKLTGMTLKVDGYQEQQMRQRLVTVMNA 87 +FDW K +G T+ + NN Q + F + TG+ ++ + + E+Q R RL T++ Sbjct: 21 EFDWRKHEGETINVMLNNLAWTQLMRDRIEAFTEATGIRVRAETFSEEQYRTRLTTLLQG 80 Query: 88 NSDEVDVFMTLPSREGEQFAAAGWYGDLTAMARNEVAK-EYDPAGLSQALLKAATFGGKL 146 S E+DVFMTLPSRE FA+ GWY DL + + E Y+ S AL ++ G + Sbjct: 81 GSSELDVFMTLPSREAPLFASNGWYADLAPLLKGEATDPAYNYDDFSAALRQSGVVGETV 140 Query: 147 TSMPMNIEGPIFYYRTDIFKKCGIEAPKTIKEVEAAAEKIKTCDSAVTPFVSRGLKPAVA 206 TS+P+N+EGP+FY+R DIF+KC +E P+ ++++ AAAEKI+ CDSA+TP+ +RGL+ V Sbjct: 141 TSVPINVEGPLFYWRRDIFEKCNVEKPEYLEDLPAAAEKIRACDSAITPWAARGLRGTVG 200 Query: 207 YTFSNMLHNIGGSYI-AGGKSNLCSAKGKEALDTYSRLLRDFGPPGVVNYSFQQISALYR 265 Y ++N+GG ++ A GK++LC + LD Y +LRD+GPPG N++F Q+ L Sbjct: 201 YPLGAFVYNMGGDFMDADGKASLCLPGTIKGLDLYGSMLRDYGPPGATNHTFTQVMDLLG 260 Query: 266 SGRAAMAFESSNELRTVMEGGARLKDTGLLPFPAGEAGQV--PTTIGWGMAVSSHSKQPD 323 GR AM ESSNE T+M+ R +D G+ P G + P I W +AVS S+ + Sbjct: 261 QGRVAMTNESSNEFSTLMKHEGRAEDIGVDVLPGGRESGISKPVVINWSLAVSGLSENKE 320 Query: 324 AAWYFVQWATSPEVQKKMALQGIAPPRPSVAKDPEYRKWIDEEPVRKEWQGALDVLATKG 383 AAWYFVQWAT E Q+ +A QGIAP R SV +R W E R EW AL ++ G Sbjct: 321 AAWYFVQWATGAENQEALATQGIAPSRVSVFNGEGFRNWASESRPRGEWLEALLEISQTG 380 Query: 384 SSEVGYP-IIANPESREFIGQAVQDLILKQKSVDQ-ACADADK 424 SS P + PE+RE + VQ ++L Q + ACA D+ Sbjct: 381 SSLYQTPSLTRTPEAREILSNVVQQIVLGQTDAETAACAVTDE 423