BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0214.0001.p         (115 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001208663.1| putative glucose-methanol-choline (GMC) oxid...   153   9e-36
ref|YP_487666.1| glucose-methanol-choline oxidoreductase [Rhodop...   150   7e-35
ref|ZP_02191362.1| Glucose-methanol-choline oxidoreductase [alph...   135   2e-30
ref|ZP_05065208.1| choline dehydrogenase [Octadecabacter antarct...   132   2e-29
ref|YP_001631518.1| putative GMC oxidoreductase [Bordetella petr...   127   5e-28

>ref|YP_001208663.1| putative glucose-methanol-choline (GMC) oxidoreductase choline
           dehydrogenase (CHD) [Bradyrhizobium sp. ORS 278]
 emb|CAL80448.1| Putative glucose-methanol-choline (GMC) oxidoreductase; putative
           choline dehydrogenase (CHD) [Bradyrhizobium sp. ORS 278]
          Length = 533

 Score =  153 bits (386), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 72/96 (75%), Positives = 84/96 (87%)

Query: 1   LREIYQQNAFRPLWDVEMVPGEAASNDAGLWDFARNTGGTVFHCVGTCRMGSDARAVLDP 60
           LR+I++Q +F+ LWD+E+ PG A ++  GLWDFAR+TGGTVFH VGTCRMG D  AVLDP
Sbjct: 429 LRDIFRQPSFQKLWDIEVAPGAAVASAPGLWDFARSTGGTVFHPVGTCRMGGDDHAVLDP 488

Query: 61  QLRVRGVERLRVIDASVMPQITSANTNATSLMIGEK 96
            LRVRGV+RLRVIDASVMPQITSANTNATSLMIGE+
Sbjct: 489 ALRVRGVDRLRVIDASVMPQITSANTNATSLMIGER 524


>ref|YP_487666.1| glucose-methanol-choline oxidoreductase [Rhodopseudomonas palustris
           HaA2]
 gb|ABD08755.1| Glucose-methanol-choline oxidoreductase [Rhodopseudomonas palustris
           HaA2]
          Length = 531

 Score =  150 bits (379), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 72/96 (75%), Positives = 83/96 (86%)

Query: 1   LREIYQQNAFRPLWDVEMVPGEAASNDAGLWDFARNTGGTVFHCVGTCRMGSDARAVLDP 60
           LREIY+Q +FR  WD+++VPGE  ++ AGLW+FAR TGGTVFH  GTCRMGSD  AV+DP
Sbjct: 429 LREIYRQPSFRERWDLDVVPGENINDPAGLWEFARTTGGTVFHACGTCRMGSDDGAVVDP 488

Query: 61  QLRVRGVERLRVIDASVMPQITSANTNATSLMIGEK 96
           +LRVRGVERLRV+DASVMP ITSANTNA SLMIGEK
Sbjct: 489 RLRVRGVERLRVVDASVMPLITSANTNAASLMIGEK 524


>ref|ZP_02191362.1| Glucose-methanol-choline oxidoreductase [alpha proteobacterium
           BAL199]
 gb|EDP61886.1| Glucose-methanol-choline oxidoreductase [alpha proteobacterium
           BAL199]
          Length = 563

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/96 (68%), Positives = 74/96 (77%)

Query: 1   LREIYQQNAFRPLWDVEMVPGEAASNDAGLWDFARNTGGTVFHCVGTCRMGSDARAVLDP 60
           LREIY+Q AF  LWD EM+PG    +DA L  F +  GGTVFHC GTCRMG D  AV+DP
Sbjct: 429 LREIYRQPAFADLWDTEMLPGPEVHSDADLLQFVQRHGGTVFHCCGTCRMGQDDGAVVDP 488

Query: 61  QLRVRGVERLRVIDASVMPQITSANTNATSLMIGEK 96
           QLRV GV+ LRVIDASVMP ITSANTNA S++IGEK
Sbjct: 489 QLRVSGVDGLRVIDASVMPTITSANTNAASILIGEK 524


>ref|ZP_05065208.1| choline dehydrogenase [Octadecabacter antarcticus 238]
 gb|EDY90447.1| choline dehydrogenase [Octadecabacter antarcticus 238]
          Length = 545

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/96 (68%), Positives = 74/96 (77%)

Query: 1   LREIYQQNAFRPLWDVEMVPGEAASNDAGLWDFARNTGGTVFHCVGTCRMGSDARAVLDP 60
           LR I+ Q AFR LWD E V GE   +DA + D  RN GGTVFH VG CRMGSD+ AVLD 
Sbjct: 429 LRSIHAQPAFRHLWDNETVIGEDRQSDAEILDAVRNMGGTVFHSVGNCRMGSDSSAVLDS 488

Query: 61  QLRVRGVERLRVIDASVMPQITSANTNATSLMIGEK 96
           Q RVRGV+ LRVIDASVMP+ITSANTNA +LM+GEK
Sbjct: 489 QFRVRGVQGLRVIDASVMPKITSANTNAATLMVGEK 524


>ref|YP_001631518.1| putative GMC oxidoreductase [Bordetella petrii DSM 12804]
 emb|CAP43250.1| putative GMC oxidoreductase [Bordetella petrii]
          Length = 536

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/97 (65%), Positives = 76/97 (78%), Gaps = 1/97 (1%)

Query: 1   LREIYQQNAFRP-LWDVEMVPGEAASNDAGLWDFARNTGGTVFHCVGTCRMGSDARAVLD 59
           LR+IYQQ AFR  +   E +PGE   +D  L +FAR  GGTVFH  G+CRMGSDA +V+D
Sbjct: 428 LRDIYQQPAFRAFIGGAEYMPGEDVRSDGELAEFARQRGGTVFHVSGSCRMGSDAASVVD 487

Query: 60  PQLRVRGVERLRVIDASVMPQITSANTNATSLMIGEK 96
           P+LRVRGVERLRVIDASVMP + SANTNA +L+IGEK
Sbjct: 488 PELRVRGVERLRVIDASVMPAMVSANTNAATLLIGEK 524