BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0213.0006.p (492 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769179.1| hypothetical protein blr2539 [Bradyrhizobium ja... 619 e-175 ref|YP_001238438.1| hypothetical protein BBta_2361 [Bradyrhizobi... 617 e-174 ref|YP_534184.1| cell wall hydrolase, SleB [Rhodopseudomonas pal... 616 e-174 ref|YP_568364.1| cell wall hydrolase, SleB [Rhodopseudomonas pal... 597 e-168 ref|YP_578693.1| cell wall hydrolase, SleB [Nitrobacter hamburge... 596 e-168 >ref|NP_769179.1| hypothetical protein blr2539 [Bradyrhizobium japonicum USDA 110] dbj|BAC47804.1| blr2539 [Bradyrhizobium japonicum USDA 110] Length = 488 Score = 619 bits (1596), Expect = e-175, Method: Compositional matrix adjust. Identities = 324/499 (64%), Positives = 381/499 (76%), Gaps = 23/499 (4%) Query: 1 MFVSRNQPKGARLALFGLGLGIFALMPTEIGYQDIASLLARQPGVAERWQKRVFASAVGS 60 M V RN PKGAR A FG+GL IFALMP E GYQDIASLLARQPGVAERWQK+V+ SA S Sbjct: 5 MSVLRNHPKGARFASFGIGLCIFALMPRETGYQDIASLLARQPGVAERWQKQVY-SAASS 63 Query: 61 IQVATYSFGRPIGTSAPQAPQILLARLDSSNLDITGTVTRNPIAAPPPRYQASDFPKVDR 120 IQ+ATYSF RPIGTS PQ+ + LA LD D+TG ++RNP PPRYQA+DFPKVDR Sbjct: 64 IQLATYSFSRPIGTSVPQSAMVRLASLDGR--DVTGAISRNPALQAPPRYQAADFPKVDR 121 Query: 121 TLKGDRLVVRRPDQVEPAEPANTAPANEDPATSNSSVKGMKTA-----TAPADSAPLDPE 175 ++KGDRL + P A PA EDPATSNSSV G KTA +P +A LDPE Sbjct: 122 SMKGDRLAIVPPTTSPDAAAPTATPAQEDPATSNSSVFGAKTAALPQAMSPESAAALDPE 181 Query: 176 LQEALRAPPLPQYAKPSPQQDDVSLSLEANPLDDLKPAPAKPAAAPADAARERDPFAFQT 235 LQEALRAPPLPQYA P P+ D++ S PL+ LK A A AA RDPF+ +T Sbjct: 182 LQEALRAPPLPQYANP-PKASDLARSFAVQPLEALK-------RATAPAAPARDPFSVKT 233 Query: 236 ASLFFGSSL--GTPETLERWQPGEAPVVVTPAATSDPDMKVMASLPVDADGPVKAGEMGE 293 A+LFFGSS G E++E WQPG P++V P DPDMKV ASL ++ K E GE Sbjct: 234 ANLFFGSSSLGGNLESIESWQPGAEPLIVMP----DPDMKVTASLTPPSEEIAKDIESGE 289 Query: 294 SIAPKGEVNADDQHTKTPAERLGLFDEKSRAKSEKCLAEAVYFEARGEAVRGQIAVAQVV 353 S+APKGEVNAD+Q ++PAERL L D+KSRAKSEKCLAEAVYFE+RGEAVRGQ+AVAQVV Sbjct: 290 SVAPKGEVNADNQRARSPAERLAL-DDKSRAKSEKCLAEAVYFESRGEAVRGQMAVAQVV 348 Query: 354 LNRAFSGKYPETVCGVVYQNKNRHYACQFTFACDNIPDVVREPDMWDRARKIAKAMLNGE 413 +NR FSGKYP+TVCG VYQNK+RH+ACQFTFACDN PDV+REP+MW+RA+KIAKAML+G+ Sbjct: 349 MNRVFSGKYPDTVCGAVYQNKHRHFACQFTFACDNNPDVIREPEMWERAKKIAKAMLDGQ 408 Query: 414 LWLRKVNRLTHYHAYGVRPSWVSEMKKMYKFGVHTFYRPRAWGDGSDAPSWGNPAETAKI 473 +WL +V + THYHAY VRPSWV+EMKKMYK GVHTFYRPRAWGDGS+ PSWG+PA+TA + Sbjct: 409 IWLPEVGKSTHYHAYWVRPSWVAEMKKMYKTGVHTFYRPRAWGDGSEEPSWGSPAQTAAL 468 Query: 474 SAQLAEAAQSSAEQASARR 492 SA+L + A+SSAE + R Sbjct: 469 SAELTQEAKSSAEMGVSER 487 >ref|YP_001238438.1| hypothetical protein BBta_2361 [Bradyrhizobium sp. BTAi1] gb|ABQ34532.1| hypothetical protein BBta_2361 [Bradyrhizobium sp. BTAi1] Length = 496 Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust. Identities = 329/505 (65%), Positives = 368/505 (72%), Gaps = 36/505 (7%) Query: 1 MFVSRNQPKGARLALFGLGLGIFALMPTEIGYQDIASLLARQPGVAERWQKRVFASAVGS 60 M V R PKGAR A FGLGL +FALMPTE GYQDIASLLARQPGVAERWQKRVF SA S Sbjct: 1 MVVLRPGPKGARFASFGLGLCVFALMPTETGYQDIASLLARQPGVAERWQKRVF-SAAAS 59 Query: 61 IQVATYSFGRPIGTSAPQAPQILLARLDSSNLDITGTVTRNPIAAPPPRYQASDFPKVDR 120 +Q+ATYSFGRPIGTSAPQA I LA LD + DITG+ RNP PPRYQASDFPKVDR Sbjct: 60 VQLATYSFGRPIGTSAPQAWSIRLASLDGRDFDITGSTPRNPALQVPPRYQASDFPKVDR 119 Query: 121 TLKGDRLVVRRPDQVEPAE------------PANTAPANEDPATSNSSVKGMKTATAP-- 166 TLKGDRLVVR P Q +P+ P + P SNSSV G KT AP Sbjct: 120 TLKGDRLVVRPPSQPQPSSVPTEAAEPAPAPPEPAPAMSPAPTDSNSSVFGAKTTEAPVA 179 Query: 167 ---ADSAPLDPELQEALRAPPLPQYAKPSPQQDDVSLSLEANPLDDLKPAPAKPAAAPAD 223 A A LDPELQEAL APPL QY P E P +LKPA AA D Sbjct: 180 PLPAPRAALDPELQEALSAPPLAQYESAKP---------EIQPSAELKPATD---AAAVD 227 Query: 224 AARERDPFAFQTASLFFGSSL--GTPETLERWQPGEAPVVVTPAATSDPDMKVMASLPVD 281 +A D F +T++L+FG+S G T+E WQPGEAP++V P DPD+K MA+L Sbjct: 228 SAVSYDGFTIKTSNLYFGTSSLGGEAGTMETWQPGEAPLIVMP----DPDLKSMAALSQP 283 Query: 282 ADGPVKAGEMGESIAPKGEVNADDQHTKTPAERLGLFDEKSRAKSEKCLAEAVYFEARGE 341 A K G+ GESIA KGEVN D+Q +TPAERLGL DEKSR KSEKCLAEAVYFE+RGE Sbjct: 284 AGEGTKTGDGGESIAAKGEVNTDNQRARTPAERLGLTDEKSRFKSEKCLAEAVYFESRGE 343 Query: 342 AVRGQIAVAQVVLNRAFSGKYPETVCGVVYQNKNRHYACQFTFACDNIPDVVREPDMWDR 401 AVRGQIAVAQVVLNRAFSG YP TVCGVVYQNK RH+ACQFTFACDN DV+REPDMW+R Sbjct: 344 AVRGQIAVAQVVLNRAFSGYYPTTVCGVVYQNKYRHFACQFTFACDNTADVIREPDMWER 403 Query: 402 ARKIAKAMLNGELWLRKVNRLTHYHAYGVRPSWVSEMKKMYKFGVHTFYRPRAWGDGSDA 461 A+KIA AML+G++WL +V + THYHAY VRPSWV+EMK+MYKFGVHTFYRP+ WGDGSDA Sbjct: 404 AKKIAAAMLDGQIWLPEVGKSTHYHAYWVRPSWVAEMKRMYKFGVHTFYRPKKWGDGSDA 463 Query: 462 PSWGNPAETAKISAQLAEAAQSSAE 486 PSWG P +TA ISA+LAEAA+S AE Sbjct: 464 PSWGTPQQTAAISAELAEAAKSEAE 488 >ref|YP_534184.1| cell wall hydrolase, SleB [Rhodopseudomonas palustris BisB18] gb|ABD89865.1| cell wall hydrolase, SleB [Rhodopseudomonas palustris BisB18] Length = 476 Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust. Identities = 329/494 (66%), Positives = 380/494 (76%), Gaps = 26/494 (5%) Query: 1 MFVSRNQPKGARLALFGLGLGIFALMPTEIGYQDIASLLARQPGVAERWQKRVFASAVGS 60 M V RN+PKGA+ A FGLGL +FAL+P+E+GYQDIASLLARQPGVAERWQKRVF+S+V + Sbjct: 1 MSVMRNRPKGAKFASFGLGLCVFALIPSELGYQDIASLLARQPGVAERWQKRVFSSSVAT 60 Query: 61 IQVATYSFGRPIGTSAPQAPQILLARLDSSNLDITGTVTRNPIAAPPPRYQASDFPKVDR 120 IQ+AT+SFGRPIGTS P + + LA LD DITG++TRNP+A PP RY+A+DFPKVDR Sbjct: 61 IQLATFSFGRPIGTSLPPSADVQLASLDHRTRDITGSLTRNPLAQPPGRYEAADFPKVDR 120 Query: 121 TLKGDRLVVRRPDQVEPAEPANTAPANEDPATSNSSVKGMKTATA-PAD-SAPLDPELQE 178 TLKGDRL PD P T+P+++D + + +V G KTA PA +APLDPEL E Sbjct: 121 TLKGDRLATVTPDTT----PIETSPSSQDDSAA-PNVAGAKTAAQLPAGPAAPLDPELAE 175 Query: 179 ALRAPPLPQYAKPSPQQDDVSLSLEANPLDDLKPAPAKPAAAPADAARERDPFAFQTASL 238 AL+APPL QY DVSLSLEA PL D + P APA D F+ +T+SL Sbjct: 176 ALQAPPLSQY--------DVSLSLEAQPLGDA--SIGAPTVAPA-----HDGFSVKTSSL 220 Query: 239 FFGSSLGTP--ETLERWQPGEAPVVVTPAATSDPDMKVMASLPVDADGPVKAGEMGESIA 296 FFGSS E++E+WQPGE P++V P DPDMKV A+LP A P +A + GESIA Sbjct: 221 FFGSSSLGAPGESMEQWQPGEEPMIVLPTGI-DPDMKVTAALPETA-APSEAAKAGESIA 278 Query: 297 PKGEVNADDQHTKTPAERLGLFDEKSRAKSEKCLAEAVYFEARGEAVRGQIAVAQVVLNR 356 KGEVNAD+Q KTPAERLGLFD K RAK EKCL +A+YFEARGEAVRGQIAVAQVVLNR Sbjct: 279 SKGEVNADNQRVKTPAERLGLFDAKLRAKHEKCLTDAIYFEARGEAVRGQIAVAQVVLNR 338 Query: 357 AFSGKYPETVCGVVYQNKNRHYACQFTFACDNIPDVVREPDMWDRARKIAKAMLNGELWL 416 AFSG YP VCGVVYQNK+RH ACQFTFACDN+ DVVREPDMWDRA+KIAKA L+G+LWL Sbjct: 339 AFSGFYPSNVCGVVYQNKHRHLACQFTFACDNVADVVREPDMWDRAKKIAKASLDGQLWL 398 Query: 417 RKVNRLTHYHAYGVRPSWVSEMKKMYKFGVHTFYRPRAWGDGSDAPSWGNPAETAKISAQ 476 +V + THYHAY VRPSWV EMKKMYKFGVHTFYRPR WGDGSDAPSWGN AETA ISA+ Sbjct: 399 PEVGKSTHYHAYWVRPSWVHEMKKMYKFGVHTFYRPRNWGDGSDAPSWGNSAETAAISAK 458 Query: 477 LAEAAQSSAEQASA 490 LAE +SSAE SA Sbjct: 459 LAEVGKSSAEITSA 472 >ref|YP_568364.1| cell wall hydrolase, SleB [Rhodopseudomonas palustris BisB5] gb|ABE38463.1| cell wall hydrolase, SleB [Rhodopseudomonas palustris BisB5] Length = 474 Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust. Identities = 320/491 (65%), Positives = 370/491 (75%), Gaps = 27/491 (5%) Query: 1 MFVSRNQPKGARLALFGLGLGIFALMPTEIGYQDIASLLARQPGVAERWQKRVFASAVGS 60 M V RN+PKGAR+A FGLGL +FA+ PTEIGYQDIASLL RQPGV ERWQKR+FAS+ GS Sbjct: 1 MSVMRNRPKGARIASFGLGLCVFAVFPTEIGYQDIASLLVRQPGVTERWQKRMFASSFGS 60 Query: 61 IQVATYSFGRPIGTSAPQAPQILLARLDSSNLDITGTVTRNPIAAPPPRYQASDFPKVDR 120 IQVAT+SFGRPIGT APQ LA LD L + G TRNP+A PP RYQASDFP VDR Sbjct: 61 IQVATFSFGRPIGTWAPQGADSRLASLDG-KLGLVGARTRNPLAQPPSRYQASDFPAVDR 119 Query: 121 TLKGDRLVVRRPDQVEPAEPANTAPANEDPATSNSSVKGMKTA-TAPADSAPLDPELQEA 179 TLKGDRL + +P P + A +A ++DP N V G KTA AP D++PLDPEL EA Sbjct: 120 TLKGDRLAIFKPGTATPDDAAPSA--SDDPNAPN--VAGAKTAELAPTDNSPLDPELAEA 175 Query: 180 LRAPPLPQYAKPSPQQDDVSLSLEANPLDDLKPAPAKPAAAPADAARERDPFAFQTASLF 239 L++ PLPQY D + +LEA+ L + P P A AA RDPF F+T+ LF Sbjct: 176 LKSEPLPQY--------DAAHALEADTLH-VALHPKSPDRAETAAAPPRDPFTFKTSILF 226 Query: 240 FGS-SLGTPE-TLERWQPGEAPVVVTPAATSDPDMK--VMASLPVDADGPVKAGEMGESI 295 FG+ SLG PE +LE+WQPGE P++VTP +DPDMK ++++ VD + G S+ Sbjct: 227 FGTGSLGGPEESLEQWQPGEEPMIVTPHG-ADPDMKQPLLSATAVDPEA------AGLSV 279 Query: 296 APKGEVNADDQHTKTPAERLGLFDEKSRAKSEKCLAEAVYFEARGEAVRGQIAVAQVVLN 355 A KGEVNAD H KTPAERLGLFD K RAK EKCLAEAVYFE+RGE VRGQIAVAQVVLN Sbjct: 280 AGKGEVNAD-HHAKTPAERLGLFDAKLRAKHEKCLAEAVYFESRGEKVRGQIAVAQVVLN 338 Query: 356 RAFSGKYPETVCGVVYQNKNRHYACQFTFACDNIPDVVREPDMWDRARKIAKAMLNGELW 415 RAFSG YP VCGVVYQNK+R ACQFTFACD + DVVREP+MWDRARKIAKA L+G+LW Sbjct: 339 RAFSGFYPNNVCGVVYQNKHRRLACQFTFACDRVADVVREPEMWDRARKIAKASLDGKLW 398 Query: 416 LRKVNRLTHYHAYGVRPSWVSEMKKMYKFGVHTFYRPRAWGDGSDAPSWGNPAETAKISA 475 L +V + THYHAY VRPSWV EMKKMY+ GVHTFYRPR WGDGS+APSWG+ +ETA ISA Sbjct: 399 LPEVAKSTHYHAYWVRPSWVHEMKKMYRTGVHTFYRPRNWGDGSEAPSWGDASETAAISA 458 Query: 476 QLAEAAQSSAE 486 QLAEAA+SSAE Sbjct: 459 QLAEAAKSSAE 469 >ref|YP_578693.1| cell wall hydrolase, SleB [Nitrobacter hamburgensis X14] gb|ABE64233.1| cell wall hydrolase, SleB [Nitrobacter hamburgensis X14] Length = 466 Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust. Identities = 324/494 (65%), Positives = 363/494 (73%), Gaps = 31/494 (6%) Query: 1 MFVSRNQPKGARLALFGLGLGIFALMPTEIGYQDIASLLARQPGVAERWQKRVFASAVGS 60 MFV N+ K AR+ALFG GL FAL+P E GYQDIASLLARQPGVAERWQKRVFASAV S Sbjct: 1 MFVLLNELKSARVALFGFGLCFFALIPNETGYQDIASLLARQPGVAERWQKRVFASAVSS 60 Query: 61 IQVATYSFGRPIGTSAPQAPQILLARLDSSNLDITGTVTRNPIAAPPPRYQASDFPKVDR 120 IQVAT+SFGRP+GTSAP A +LLA +D N G + RN + PPPRY+ASDFPKVDR Sbjct: 61 IQVATFSFGRPVGTSAPHAATLLLASIDGQN---AGAIARNRLTRPPPRYRASDFPKVDR 117 Query: 121 TLKGDRLVVRRPDQVEPAEPANTAPANEDPATSNSSVKGMKTATAPADSAPLDPELQEAL 180 LKGDRL + P A + P DPATSN+SV G KTATA A+ A LDPEL EAL Sbjct: 118 RLKGDRLTIAAPAAPSAAP-LGSPPL--DPATSNASVAGAKTATA-AEPAALDPELAEAL 173 Query: 181 RAPPLPQYAKPSPQQDDVSLSLEANPLDDLKPAPAKPAAAPADAARERDPFAFQTASLFF 240 +APPLPQY D+SLSLEA PLDDLK AA D D F+ +TASL+F Sbjct: 174 QAPPLPQY--------DISLSLEARPLDDLKRHNEADDAA-IDPQPSTDGFSIKTASLYF 224 Query: 241 G-SSLGTPE-TLERWQPGEAPVVVTPAATSDPDMKVMASLPVDADGPVKAGEMGESIAPK 298 G SSLG LERWQPGE P++VTP +DPDMK AS+P D + + GE++ K Sbjct: 225 GGSSLGVASGVLERWQPGEEPMIVTPGPAADPDMK--ASVPSQQD----SAKAGETVVGK 278 Query: 299 GEVNADDQHTKTPAERLGLFDEKSRAKSEKCLAEAVYFEARGEAVRGQIAVAQVVLNRAF 358 GEV KTPAERLGL +EK RAK EKCLAEAVYFEARGEAVRGQIAVAQVV+NR F Sbjct: 279 GEV-------KTPAERLGLQNEKKRAKQEKCLAEAVYFEARGEAVRGQIAVAQVVMNRVF 331 Query: 359 SGKYPETVCGVVYQNKNRHYACQFTFACDNIPDVVREPDMWDRARKIAKAMLNGELWLRK 418 SG YP TVCGVVYQN NRH ACQFTFACD I DVV EPDMWDRAR+IAKA L+G LWL + Sbjct: 332 SGYYPTTVCGVVYQNANRHLACQFTFACDGIRDVVTEPDMWDRARRIAKATLDGRLWLPE 391 Query: 419 VNRLTHYHAYGVRPSWVSEMKKMYKFGVHTFYRPRAWGDGSDAPSWGNPAETAKISAQLA 478 V + THYHAY V PSWV EMKKMY+ GVHTFYRPRAWGDG DAPSWG A+TA+ISA+LA Sbjct: 392 VGKSTHYHAYWVHPSWVHEMKKMYRTGVHTFYRPRAWGDGRDAPSWGTTAQTAEISARLA 451 Query: 479 EAAQSSAEQASARR 492 E A+SSAE + R Sbjct: 452 EVARSSAELGGSVR 465