BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0213.0003.p         (51 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004107574.1| hypothetical protein Rpdx1_1215 [Rhodopseudo...    79   3e-13
ref|YP_568362.1| hypothetical protein RPD_1223 [Rhodopseudomonas...    78   4e-13
ref|YP_484719.1| hypothetical protein RPB_1098 [Rhodopseudomonas...    77   6e-13
ref|NP_946401.1| hypothetical protein RPA1050 [Rhodopseudomonas ...    77   1e-12
ref|YP_534186.1| hypothetical protein RPC_4344 [Rhodopseudomonas...    75   3e-12

>ref|YP_004107574.1| hypothetical protein Rpdx1_1215 [Rhodopseudomonas palustris DX-1]
 gb|ADU42841.1| hypothetical protein Rpdx1_1215 [Rhodopseudomonas palustris DX-1]
          Length = 51

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/51 (78%), Positives = 47/51 (92%)

Query: 1  MTITAGHLPAIVALIAGVLILIMPRLLNYIVAIYLIFVGLVGMGLLRWLHL 51
          MTIT  H+PAIVALIAG+LIL+MPRLLN+IVAIYLI VGL+G+G LR+LHL
Sbjct: 1  MTITTAHIPAIVALIAGILILVMPRLLNFIVAIYLICVGLIGLGALRFLHL 51


>ref|YP_568362.1| hypothetical protein RPD_1223 [Rhodopseudomonas palustris BisB5]
 gb|ABE38461.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 51

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/51 (78%), Positives = 48/51 (94%)

Query: 1  MTITAGHLPAIVALIAGVLILIMPRLLNYIVAIYLIFVGLVGMGLLRWLHL 51
          MTITA H+PAIVALIAG+LILIMPRLLN +VAIYLI +GL+G+G+LR+LHL
Sbjct: 1  MTITAAHIPAIVALIAGILILIMPRLLNIVVAIYLICIGLIGLGVLRFLHL 51


>ref|YP_484719.1| hypothetical protein RPB_1098 [Rhodopseudomonas palustris HaA2]
 gb|ABD05808.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 51

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/51 (78%), Positives = 47/51 (92%)

Query: 1  MTITAGHLPAIVALIAGVLILIMPRLLNYIVAIYLIFVGLVGMGLLRWLHL 51
          MTITA H+PAIVALIAG+LIL+MPRLLN +VAIYLI VGL+G+G LR+LHL
Sbjct: 1  MTITAAHIPAIVALIAGILILVMPRLLNIVVAIYLICVGLIGLGALRFLHL 51


>ref|NP_946401.1| hypothetical protein RPA1050 [Rhodopseudomonas palustris CGA009]
 ref|YP_001990257.1| hypothetical protein Rpal_1242 [Rhodopseudomonas palustris TIE-1]
 emb|CAE26493.1| hypothetical protein RPA1050 [Rhodopseudomonas palustris CGA009]
 gb|ACE99781.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 51

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/51 (74%), Positives = 47/51 (92%)

Query: 1  MTITAGHLPAIVALIAGVLILIMPRLLNYIVAIYLIFVGLVGMGLLRWLHL 51
          MTIT  H+PAIVAL+AG+LIL+MPRLLN+IVAIYLI +GL+G+G LR+LHL
Sbjct: 1  MTITTAHIPAIVALLAGILILVMPRLLNFIVAIYLICIGLIGLGALRFLHL 51


>ref|YP_534186.1| hypothetical protein RPC_4344 [Rhodopseudomonas palustris BisB18]
 gb|ABD89867.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisB18]
          Length = 51

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/51 (72%), Positives = 46/51 (90%)

Query: 1  MTITAGHLPAIVALIAGVLILIMPRLLNYIVAIYLIFVGLVGMGLLRWLHL 51
          M IT+ H+PAIVALIAG+LIL+MPRLLN +VAIYLI +GL+G+G+LRW HL
Sbjct: 1  MVITSAHIPAIVALIAGLLILVMPRLLNLVVAIYLICIGLIGLGVLRWFHL 51