BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0212.0012.p (174 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07027982.1| secretion protein HlyD family protein [Afipia... 201 3e-50 ref|YP_001207033.1| HlyD family multidrug resistance protein [Br... 154 6e-36 ref|YP_002495659.1| secretion protein HlyD family protein [Methy... 150 9e-35 ref|YP_001756272.1| secretion protein HlyD family protein [Methy... 148 2e-34 ref|YP_001923910.1| secretion protein HlyD family protein [Methy... 139 2e-31 >ref|ZP_07027982.1| secretion protein HlyD family protein [Afipia sp. 1NLS2] gb|EFI50803.1| secretion protein HlyD family protein [Afipia sp. 1NLS2] Length = 388 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 105/150 (70%), Positives = 130/150 (86%) Query: 1 MRDRLREHWLLATVSACLLLLAIVGAVSYWLNVRHYESTDDAFVAARSFAVAAKVGGYVV 60 + +RLREHW L + A LLL+ +V ++YWL++R YESTDDAFVAARSF+VAAKVGGYV Sbjct: 47 LMERLREHWKLTALVAGLLLIVLVAGLAYWLDIRDYESTDDAFVAARSFSVAAKVGGYVT 106 Query: 61 EVPVTDNQHVNAGDLLARIDERDYKIAVDQAGAQVAVAEANIANVEAQIDSQHEQIKEAK 120 EVPVTDNQHV AGDLLARID+RDY+ AVDQA AQVAVA+ANI N++AQI SQHEQI +A+ Sbjct: 107 EVPVTDNQHVKAGDLLARIDDRDYRNAVDQAKAQVAVAQANIDNIKAQIASQHEQIDQAQ 166 Query: 121 AQQQQAEAQLKFAREEAERAQNLVEKGAGT 150 AQ +QA+AQL+FA++E RA++LV+KGAGT Sbjct: 167 AQVEQAKAQLEFAQQEESRAKDLVQKGAGT 196 >ref|YP_001207033.1| HlyD family multidrug resistance protein [Bradyrhizobium sp. ORS 278] emb|CAL78816.1| putative Multidrug resistance protein (hlyD family), emrA-like [Bradyrhizobium sp. ORS 278] Length = 423 Score = 154 bits (388), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 79/149 (53%), Positives = 101/149 (67%) Query: 2 RDRLREHWLLATVSACLLLLAIVGAVSYWLNVRHYESTDDAFVAARSFAVAAKVGGYVVE 61 R LR H + A V +LL A G Y+ H+ESTDDAF+AAR F++A KV GY+ Sbjct: 70 RGLLRRHPVGAAVGLVVLLAAAAGGYVYFDAASHFESTDDAFIAARQFSIAPKVSGYITS 129 Query: 62 VPVTDNQHVNAGDLLARIDERDYKIAVDQAGAQVAVAEANIANVEAQIDSQHEQIKEAKA 121 VPVTDNQHV AGD++ARID+RDYK A+ QA AQV AEA I N++AQI Q QI +A Sbjct: 130 VPVTDNQHVKAGDVIARIDDRDYKTALAQAEAQVRSAEAAIHNIDAQIAVQQAQITAGQA 189 Query: 122 QQQQAEAQLKFAREEAERAQNLVEKGAGT 150 Q Q++A L FA+++A+R Q L G+GT Sbjct: 190 QVDQSQAGLTFAQQQADRYQQLARTGSGT 218 >ref|YP_002495659.1| secretion protein HlyD family protein [Methylobacterium nodulans ORS 2060] gb|ACL55356.1| secretion protein HlyD family protein [Methylobacterium nodulans ORS 2060] Length = 400 Score = 150 bits (378), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 82/146 (56%), Positives = 102/146 (69%), Gaps = 1/146 (0%) Query: 5 LREHWLLATVSACLLLLAIVGAVSYWLNVRH-YESTDDAFVAARSFAVAAKVGGYVVEVP 63 +R H + + A LL+ YWL H YESTDDAFVAAR F+VA KV GYVV VP Sbjct: 62 IRRHPVWFALGAILLVATGAAGFWYWLVFVHPYESTDDAFVAARQFSVAPKVSGYVVAVP 121 Query: 64 VTDNQHVNAGDLLARIDERDYKIAVDQAGAQVAVAEANIANVEAQIDSQHEQIKEAKAQQ 123 VTDNQHV AG +L +ID RDY A+ +A AQVA AEA I N++AQI++Q I EA+AQ Sbjct: 122 VTDNQHVEAGSVLFQIDRRDYAAALREAQAQVASAEAAIRNIDAQIEAQRGSIAEAEAQV 181 Query: 124 QQAEAQLKFAREEAERAQNLVEKGAG 149 +QA+A L FAR+EA R Q+L ++GAG Sbjct: 182 EQADAALAFARQEAARYQDLAQRGAG 207 >ref|YP_001756272.1| secretion protein HlyD family protein [Methylobacterium radiotolerans JCM 2831] gb|ACB25589.1| secretion protein HlyD family protein [Methylobacterium radiotolerans JCM 2831] Length = 422 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 77/147 (52%), Positives = 102/147 (69%), Gaps = 1/147 (0%) Query: 5 LREHWLLATVSACLLLLAIVGAVSYWLNVRH-YESTDDAFVAARSFAVAAKVGGYVVEVP 63 LR H + + ++ VG YWL H YESTDDAFV ARS ++ KVGGY+V+VP Sbjct: 84 LRRHPVAFLLGGLAVVALCVGVFFYWLLYMHPYESTDDAFVDARSISIQPKVGGYLVDVP 143 Query: 64 VTDNQHVNAGDLLARIDERDYKIAVDQAGAQVAVAEANIANVEAQIDSQHEQIKEAKAQQ 123 VTDNQHV AG +L ++ +RDY IA+DQA AQVA EA I N++AQI +Q+ I +KAQ Sbjct: 144 VTDNQHVEAGQILFQVFQRDYDIALDQAKAQVAADEAGIKNIDAQIQAQYANIDVSKAQV 203 Query: 124 QQAEAQLKFAREEAERAQNLVEKGAGT 150 AEA LKFA+E+A R ++L E+G+G+ Sbjct: 204 ATAEAALKFAQEDAARYKDLAERGSGS 230 >ref|YP_001923910.1| secretion protein HlyD family protein [Methylobacterium populi BJ001] gb|ACB79375.1| secretion protein HlyD family protein [Methylobacterium populi BJ001] Length = 325 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 80/133 (60%), Positives = 102/133 (76%), Gaps = 2/133 (1%) Query: 20 LLAI-VGAVSYWL-NVRHYESTDDAFVAARSFAVAAKVGGYVVEVPVTDNQHVNAGDLLA 77 +LA+ V YWL N+ YE+TDDAFV ARSF VA KVGGYVV VPVTDNQHV AGD L Sbjct: 1 MLALGVAVYFYWLINLHPYETTDDAFVDARSFTVAPKVGGYVVAVPVTDNQHVRAGDTLF 60 Query: 78 RIDERDYKIAVDQAGAQVAVAEANIANVEAQIDSQHEQIKEAKAQQQQAEAQLKFAREEA 137 +ID RDY++A++QA AQV A+A+I NV+AQI++Q Q++ AKAQ + A+A L FA E+A Sbjct: 61 QIDPRDYRVALEQAEAQVQAAQASIRNVDAQIEAQKAQVEAAKAQVETAQAALTFAEEDA 120 Query: 138 ERAQNLVEKGAGT 150 +R + L E+GAGT Sbjct: 121 DRYRKLAERGAGT 133