BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0212.0009.p (419 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769349.1| L-sorbosone dehydrogenase [Bradyrhizobium japon... 645 0.0 ref|YP_001238791.1| putative L-sorbosone dehydrogenase [Bradyrhi... 639 0.0 ref|YP_001204458.1| putative L-sorbosone dehydrogenase [Bradyrhi... 632 e-179 ref|YP_004139990.1| NHL repeat containing protein [Mesorhizobium... 550 e-154 ref|YP_004609390.1| NHL repeat containing protein [Mesorhizobium... 538 e-151 >ref|NP_769349.1| L-sorbosone dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC47974.1| blr2709 [Bradyrhizobium japonicum USDA 110] Length = 444 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/418 (73%), Positives = 353/418 (84%), Gaps = 1/418 (0%) Query: 1 VLKGTEAFGDWQRDKPGTVRLITPQDLPKPGATASSSKFPRVMPRPASAAPQVPAGFKIE 60 V++G +A+GDWQ D+PGTVRLI PQDL KPGAT S + F RV+PRP+ A+PQVP GFKIE Sbjct: 27 VMQGRDAYGDWQSDRPGTVRLIRPQDLVKPGATRSVASFARVVPRPSDASPQVPPGFKIE 86 Query: 61 LFASGLSGPRIIRTAPNGDIFVVETGSSRIRILRSPDGAARPATNEVYATGLNQPFGIAF 120 LFA GL PRI+R APNGD+FV ET + IR+LR+ +G + A NEV+A+GL QPFG+AF Sbjct: 87 LFAEGLRAPRIVRVAPNGDVFVAETRAGTIRVLRAGEGG-KVAANEVFASGLRQPFGVAF 145 Query: 121 FPSGDNPQWLYVANTDSVVRFAYRNGDLKASGKPETIVARLPPGYAHSTRDIVFTPDDKR 180 FP+GDNPQW+YVANTDSVVRF Y+ GDLKA K E IVA LP HSTRDIVFTPD+KR Sbjct: 146 FPNGDNPQWVYVANTDSVVRFPYQAGDLKARSKAEKIVASLPHDGGHSTRDIVFTPDNKR 205 Query: 181 MLVSVGSAGNAGEGLGRPPKGIEAWSRDHALGAAWGDETDRAAVLAFDPDGKNQKLFATG 240 MLVSVGS N EG+G PP G++AWS+ LGAAW ET+RA VLAF PDGK +K++ATG Sbjct: 206 MLVSVGSLSNVAEGMGTPPGGMDAWSKTQPLGAAWASETERATVLAFTPDGKERKIYATG 265 Query: 241 IRNCVGLAVQPGSGTPWCSTNERDGRGDNLVPDYVTRVREGAFYGWPWYYIGSNEDPAHA 300 IRNCVGLA+Q +G PWCSTNERDG GD+LVPDYVT V+EGAFYGWPW+YIG NEDP HA Sbjct: 266 IRNCVGLAIQSQTGLPWCSTNERDGLGDDLVPDYVTSVKEGAFYGWPWFYIGGNEDPRHA 325 Query: 301 GARPDLKDRVTVPDVLLQAHSASLGLTFYTGSSFPPEYRGDAFAAEHGSWNRSKRTGYKV 360 GARPDLKDRVT+PDVL+Q HSASLG+TFY G+ FP +Y+GDAFAAEHGSWNRSKRTGYKV Sbjct: 326 GARPDLKDRVTIPDVLIQPHSASLGMTFYEGTQFPSDYQGDAFAAEHGSWNRSKRTGYKV 385 Query: 361 IRIRLKDGVPTGEYEDFVTGFVIGDNEVWGRPVGVTVARDGALLVSEDGNGTIWRVSR 418 IRIR+KDG PTGEYEDFVTGFV+ D EVWGRPVGV VA+DGALL+SEDGNGTIWRVS Sbjct: 386 IRIRMKDGKPTGEYEDFVTGFVLSDTEVWGRPVGVAVAKDGALLISEDGNGTIWRVSH 443 >ref|YP_001238791.1| putative L-sorbosone dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ34885.1| putative L-sorbosone dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 437 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/418 (74%), Positives = 354/418 (84%), Gaps = 1/418 (0%) Query: 1 VLKGTEAFGDWQRDKPGTVRLITPQDLPKPGATASSSKFPRVMPRPASAAPQVPAGFKIE 60 VLKG +AFG WQ D PGT+RLI P+DLPKPGATAS++ RV+ RPAS P+V GFKI Sbjct: 21 VLKGRDAFGSWQGDAPGTIRLIRPEDLPKPGATASAANVSRVVQRPASVLPKVVDGFKIA 80 Query: 61 LFASGLSGPRIIRTAPNGDIFVVETGSSRIRILRSPDGAARPATNEVYATGLNQPFGIAF 120 LFA GLSGPRIIRTAPNGDIFV ET + RIR+LR + ++ A++E++A L PFGIAF Sbjct: 81 LFADGLSGPRIIRTAPNGDIFVAETRAGRIRVLRPSEDGSKVASSEMFAERLGHPFGIAF 140 Query: 121 FPSGDNPQWLYVANTDSVVRFAYRNGDLKASGKPETIVARLPPGYAHSTRDIVFTPDDKR 180 +PS D PQW+YVA+TD V+RF YR+GD+K +G + +VA LP GY HSTRD+VFTPD +R Sbjct: 141 YPSVD-PQWVYVASTDRVLRFPYRSGDMKPAGAMQVVVADLPAGYGHSTRDLVFTPDGQR 199 Query: 181 MLVSVGSAGNAGEGLGRPPKGIEAWSRDHALGAAWGDETDRAAVLAFDPDGKNQKLFATG 240 MLVSVGSAGN GE LG P G+ AW + + GAAWG ET+RA VLAFDPDGKN+ LFATG Sbjct: 200 MLVSVGSAGNVGEALGEPDGGLAAWIKANPPGAAWGAETERAGVLAFDPDGKNRSLFATG 259 Query: 241 IRNCVGLAVQPGSGTPWCSTNERDGRGDNLVPDYVTRVREGAFYGWPWYYIGSNEDPAHA 300 IRNCVGLA+QPGSGTPWCSTNERDG GD+LVPDYVTRV+EG FYGWPWYY+G NEDP HA Sbjct: 260 IRNCVGLAIQPGSGTPWCSTNERDGLGDDLVPDYVTRVKEGGFYGWPWYYVGDNEDPRHA 319 Query: 301 GARPDLKDRVTVPDVLLQAHSASLGLTFYTGSSFPPEYRGDAFAAEHGSWNRSKRTGYKV 360 G RPDLK +VT+PDVLLQAHSASLGLTFY + FPPEYRGDAFAAEHGSWNRSKRTGYKV Sbjct: 320 GERPDLKGQVTIPDVLLQAHSASLGLTFYDAALFPPEYRGDAFAAEHGSWNRSKRTGYKV 379 Query: 361 IRIRLKDGVPTGEYEDFVTGFVIGDNEVWGRPVGVTVARDGALLVSEDGNGTIWRVSR 418 IR+RLKDGVPTGEYEDFVTGFV+ D EVWGRPVGV VARDG+LL+SEDGNGTIWRVSR Sbjct: 380 IRVRLKDGVPTGEYEDFVTGFVVNDREVWGRPVGVAVARDGSLLISEDGNGTIWRVSR 437 >ref|YP_001204458.1| putative L-sorbosone dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL76221.1| putative L-sorbosone dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 442 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 305/418 (72%), Positives = 347/418 (83%), Gaps = 1/418 (0%) Query: 1 VLKGTEAFGDWQRDKPGTVRLITPQDLPKPGATASSSKFPRVMPRPASAAPQVPAGFKIE 60 VLKG +AFG WQ D PGTVRLI P++LPKPGATAS++ RV+ RPASA P+VP GFK+ Sbjct: 26 VLKGKDAFGGWQGDAPGTVRLIRPENLPKPGATASAANVSRVVQRPASAVPKVPDGFKVA 85 Query: 61 LFASGLSGPRIIRTAPNGDIFVVETGSSRIRILRSPDGAARPATNEVYATGLNQPFGIAF 120 LFA GLSGPRIIRTAPNGDIFV ET + R+R+LR + ++ E++A L PFGIAF Sbjct: 86 LFAEGLSGPRIIRTAPNGDIFVAETRAGRVRVLRPNEDGSKAEATEIFADRLGHPFGIAF 145 Query: 121 FPSGDNPQWLYVANTDSVVRFAYRNGDLKASGKPETIVARLPPGYAHSTRDIVFTPDDKR 180 +P D PQW+YVA+T+ V+RF YR GD+KASG + +V LP GY HSTRDIVFT D +R Sbjct: 146 YPIAD-PQWVYVASTERVMRFPYRTGDMKASGAMQVVVPDLPAGYGHSTRDIVFTRDGQR 204 Query: 181 MLVSVGSAGNAGEGLGRPPKGIEAWSRDHALGAAWGDETDRAAVLAFDPDGKNQKLFATG 240 MLVSVGSAGN GE LG P G+ AW + H LGAAWG ETDRA VLAFDP+GK++ LFA+G Sbjct: 205 MLVSVGSAGNVGEALGEPAGGLAAWIKAHPLGAAWGGETDRAGVLAFDPEGKSRSLFASG 264 Query: 241 IRNCVGLAVQPGSGTPWCSTNERDGRGDNLVPDYVTRVREGAFYGWPWYYIGSNEDPAHA 300 IRNCVGLA+QP +G PWCSTNERDG GD+LVPDYVTRV+EG FYGWPWYY+G N DP HA Sbjct: 265 IRNCVGLAIQPATGMPWCSTNERDGLGDDLVPDYVTRVKEGGFYGWPWYYMGDNPDPRHA 324 Query: 301 GARPDLKDRVTVPDVLLQAHSASLGLTFYTGSSFPPEYRGDAFAAEHGSWNRSKRTGYKV 360 G RPDLK ++TVPDVLLQAHSASLGLTFY FPPEYRGD FAAEHGSWNRSKRTGYKV Sbjct: 325 GERPDLKGQITVPDVLLQAHSASLGLTFYDADLFPPEYRGDGFAAEHGSWNRSKRTGYKV 384 Query: 361 IRIRLKDGVPTGEYEDFVTGFVIGDNEVWGRPVGVTVARDGALLVSEDGNGTIWRVSR 418 IRIRLKDG+PTGEYEDFVTGFV+ D EVWGRPVGVTVARDG+LL+SEDGNGTIWRVSR Sbjct: 385 IRIRLKDGMPTGEYEDFVTGFVVNDREVWGRPVGVTVARDGSLLISEDGNGTIWRVSR 442 >ref|YP_004139990.1| NHL repeat containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV09940.1| NHL repeat containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 450 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 260/419 (62%), Positives = 318/419 (75%), Gaps = 2/419 (0%) Query: 1 VLKGTEAFGDWQRDKPGTVRLITPQDLPKPGATASSSKFPRVMPRPASAAPQVPAGFKIE 60 VLKG AFGDW+ DKPGT RLI P DLPKP AT S+S + PA A Q+P GF E Sbjct: 28 VLKGAAAFGDWRADKPGTRRLIRPDDLPKPNATRSTSNSAGIADMPADAKLQLPPGFSAE 87 Query: 61 LFASGLSGPRIIRTAPNGDIFVVETGSSRIRILRSPDGAARPATNEVYATGLNQPFGIAF 120 L ASG+ PR++R APNGD+FV ++ ++++RI R +G A+PA + ++A LN+P+GIAF Sbjct: 88 LVASGIDNPRVVRVAPNGDLFVADSKANQVRIYRLAEGRAKPAQDRIFAGNLNRPYGIAF 147 Query: 121 FPSGDNPQWLYVANTDSVVRFAYRNGDLKASGKPETIVARLPPGYAHSTRDIVFTPDDKR 180 +P G +PQW+YVAN+DS+VRFAYRNGDLKASG PETIV +P + H TRDI F+PD K Sbjct: 148 YPPGADPQWVYVANSDSIVRFAYRNGDLKASGDPETIVGNIPASH-HWTRDIAFSPDGKT 206 Query: 181 MLVSVGSAGNAGEGLGRPPKG-IEAWSRDHALGAAWGDETDRAAVLAFDPDGKNQKLFAT 239 + +SVGS N E +GR P+G ++AW++ LGAAWG E RA VLAFDPDGKN ++FA Sbjct: 207 LYLSVGSGSNVAEDMGREPRGGLDAWAKSQPLGAAWGSEDGRADVLAFDPDGKNGRIFAA 266 Query: 240 GIRNCVGLAVQPGSGTPWCSTNERDGRGDNLVPDYVTRVREGAFYGWPWYYIGSNEDPAH 299 G+RNC G+ VQP +G WC NERD GDN+ P+Y T V+EGAFYGWPWYYIG+NEDP H Sbjct: 267 GLRNCSGMTVQPATGALWCVVNERDALGDNVPPEYATVVKEGAFYGWPWYYIGNNEDPRH 326 Query: 300 AGARPDLKDRVTVPDVLLQAHSASLGLTFYTGSSFPPEYRGDAFAAEHGSWNRSKRTGYK 359 G RPDL + TVPDVL+QAHSA L + FY G SFP EY+GDAF A HGSWNR RTGYK Sbjct: 327 KGERPDLAGKTTVPDVLMQAHSAPLTIAFYEGKSFPAEYKGDAFVALHGSWNRGNRTGYK 386 Query: 360 VIRIRLKDGVPTGEYEDFVTGFVIGDNEVWGRPVGVTVARDGALLVSEDGNGTIWRVSR 418 V+R+ KDG PTG YEDF+TGFV+ + EVWGRPVGV +A DGAL+VSEDGNGTIWRV+ Sbjct: 387 VVRLLFKDGKPTGAYEDFITGFVVSNGEVWGRPVGVAIASDGALIVSEDGNGTIWRVTH 445 >ref|YP_004609390.1| NHL repeat containing protein [Mesorhizobium opportunistum WSM2075] gb|AEH85296.1| NHL repeat containing protein [Mesorhizobium opportunistum WSM2075] Length = 468 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 258/424 (60%), Positives = 316/424 (74%), Gaps = 8/424 (1%) Query: 1 VLKGTEAFGDWQRDKPGTVRLITPQDLPKPGATASSSKFPRVMPRPASAAPQVPAGFKIE 60 VL+G AFGDW+ DKPG RLI P+DLPKP S+S + RPA A PQ+P GF E Sbjct: 40 VLRGPAAFGDWRADKPGVRRLIKPEDLPKPNVAKSASNSAGLAERPADAKPQLPEGFSAE 99 Query: 61 LFASGLSGPRIIRTAPNGDIFVVETGSSRIRILRSPDGAARPATNEVYATGLNQPFGIAF 120 L ASG+ PR++RTAPNGD+FV ++ +++IR+ R +G+A+PA ++A LNQP+GIAF Sbjct: 100 LIASGIDNPRVVRTAPNGDLFVADSEANQIRVYRLTEGSAKPAEKSIFAGDLNQPYGIAF 159 Query: 121 FPSGDNPQWLYVANTDSVVRFAYRNGDLKASGKPETIVARLPPGYAHSTRDIVFTPDDKR 180 +P G +PQW+YVAN+DS+VRFAYRNGDLKAS PETIV +P + H TRDI F+PD K Sbjct: 160 YPPGSDPQWVYVANSDSIVRFAYRNGDLKASADPETIVDDIPSNH-HWTRDIAFSPDGKT 218 Query: 181 MLVSVGSAGNAGEGLGRPPK-GIEAWSRDHALGAAWGDETDRAAVLAFDPDGKNQKLFAT 239 + +SVGS NA +G+ P+ G+EAW + LGAAWG E RA V AFDPDGKN + AT Sbjct: 219 LYLSVGSGSNAAGDMGKRPRGGLEAWVKSKPLGAAWGSEEGRADVQAFDPDGKNGRTVAT 278 Query: 240 GIRNCVGLAVQPGSGTPWCSTNERDGRGDNLVPDYVTRVREGAFYGWPWYYIGSNEDPAH 299 G+RNC G+ VQP +G WC NERD GDN +Y T VREGAFYGWPWYYIG+NEDP H Sbjct: 279 GLRNCSGMTVQPATGALWCVVNERDALGDNTPAEYATSVREGAFYGWPWYYIGNNEDPRH 338 Query: 300 AGARPDLKDRVTVPDVLLQAHSASLGLTFYTG------SSFPPEYRGDAFAAEHGSWNRS 353 G RPDL +V +PDVL+QAHSA L + FY G + FP EYRGDAF A HGSWNR Sbjct: 339 KGERPDLAGKVDIPDVLMQAHSAPLNIAFYDGKDLPANAGFPREYRGDAFVALHGSWNRG 398 Query: 354 KRTGYKVIRIRLKDGVPTGEYEDFVTGFVIGDNEVWGRPVGVTVARDGALLVSEDGNGTI 413 RTGYKV+R+ +DG PTGEYEDF+TGFV+ + EVWGRPVGVTVA+DGAL+V+EDGNGTI Sbjct: 399 NRTGYKVVRLLFRDGKPTGEYEDFMTGFVVSNGEVWGRPVGVTVAKDGALIVTEDGNGTI 458 Query: 414 WRVS 417 WRV+ Sbjct: 459 WRVT 462