BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0212.0005.p (142 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04941910.1| hypothetical protein BCPG_03430 [Burkholderia... 246 1e-63 ref|YP_624044.1| HxlR family transcriptional regulator [Burkhold... 245 1e-63 ref|YP_372606.1| putative transcriptional regulator [Burkholderi... 243 6e-63 ref|ZP_03269195.1| transcriptional regulator, HxlR family [Burkh... 236 8e-61 ref|YP_001892423.1| HxlR family transcriptional regulator [Ralst... 225 2e-57 >ref|ZP_04941910.1| hypothetical protein BCPG_03430 [Burkholderia cenocepacia PC184] gb|EAY65081.1| hypothetical protein BCPG_03430 [Burkholderia cenocepacia PC184] Length = 149 Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 118/138 (85%), Positives = 130/138 (94%) Query: 1 MCGVARPLDAIGDWWSLLIVRDAFDGLRRFGEFQKSLGLAKNILSARLRNLLAHGIMETV 60 +CGVARPLDAIGDWWSLLIVRDAFDGLRRFGEFQK+LGLAKNIL+ARLRNL+AHGIM+ V Sbjct: 11 LCGVARPLDAIGDWWSLLIVRDAFDGLRRFGEFQKNLGLAKNILAARLRNLVAHGIMDVV 70 Query: 61 PASDGSPYQEYVLTEKGRGLFPLLVALRQWGEDFFFEPDEAHVLLVDRKNGLPVRRLELR 120 PA+DG + EYVLTEKGRGLFPLLVALRQWGEDFFFEPDEAHVLLVDRK GLPVR+LELR Sbjct: 71 PAADGGAHHEYVLTEKGRGLFPLLVALRQWGEDFFFEPDEAHVLLVDRKTGLPVRKLELR 130 Query: 121 AQDGRIVGAEDTMVRLPP 138 +QDGR++G EDT+V PP Sbjct: 131 SQDGRVLGPEDTVVLPPP 148 >ref|YP_624044.1| HxlR family transcriptional regulator [Burkholderia cenocepacia AU 1054] ref|YP_837811.1| HxlR family transcriptional regulator [Burkholderia cenocepacia HI2424] ref|YP_001776979.1| HxlR family transcriptional regulator [Burkholderia cenocepacia MC0-3] gb|ABF79071.1| transcriptional regulator, HxlR family [Burkholderia cenocepacia AU 1054] gb|ABK10918.1| transcriptional regulator, HxlR family [Burkholderia cenocepacia HI2424] gb|ACA92489.1| transcriptional regulator, HxlR family [Burkholderia cenocepacia MC0-3] Length = 149 Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 118/139 (84%), Positives = 130/139 (93%) Query: 1 MCGVARPLDAIGDWWSLLIVRDAFDGLRRFGEFQKSLGLAKNILSARLRNLLAHGIMETV 60 +CGVARPLDAIGDWWSLLIVRDAFDGLRRFGEFQK+LGLAKNIL+ARLRNL+AHGIM+ V Sbjct: 11 LCGVARPLDAIGDWWSLLIVRDAFDGLRRFGEFQKNLGLAKNILAARLRNLVAHGIMDVV 70 Query: 61 PASDGSPYQEYVLTEKGRGLFPLLVALRQWGEDFFFEPDEAHVLLVDRKNGLPVRRLELR 120 PA+DG + EYVLTEKGRGLFPLLVALRQWGEDFFFEPDEAHVLLVDRK GLPVR+LELR Sbjct: 71 PAADGGAHHEYVLTEKGRGLFPLLVALRQWGEDFFFEPDEAHVLLVDRKTGLPVRKLELR 130 Query: 121 AQDGRIVGAEDTMVRLPPA 139 +QDGR++G EDT+V PP Sbjct: 131 SQDGRVLGPEDTVVLPPPG 149 >ref|YP_372606.1| putative transcriptional regulator [Burkholderia sp. 383] gb|ABB11962.1| putative transcriptional regulator [Burkholderia sp. 383] Length = 149 Score = 243 bits (620), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 118/137 (86%), Positives = 129/137 (94%) Query: 2 CGVARPLDAIGDWWSLLIVRDAFDGLRRFGEFQKSLGLAKNILSARLRNLLAHGIMETVP 61 CGVARPLDAIGDWWSLLIVRDAFDGLRRFGEFQK+LGLAKNIL+ARLRNL+AHGIM+ VP Sbjct: 12 CGVARPLDAIGDWWSLLIVRDAFDGLRRFGEFQKNLGLAKNILAARLRNLVAHGIMDIVP 71 Query: 62 ASDGSPYQEYVLTEKGRGLFPLLVALRQWGEDFFFEPDEAHVLLVDRKNGLPVRRLELRA 121 A+DG + EYVLTEKGRGLFPLLVALRQWGEDFFFEPDEAHVLLVDRK GLPVR+LELR+ Sbjct: 72 AADGGAHHEYVLTEKGRGLFPLLVALRQWGEDFFFEPDEAHVLLVDRKAGLPVRKLELRS 131 Query: 122 QDGRIVGAEDTMVRLPP 138 QDGR++G EDT+V PP Sbjct: 132 QDGRVLGPEDTVVLPPP 148 >ref|ZP_03269195.1| transcriptional regulator, HxlR family [Burkholderia sp. H160] gb|EDZ99220.1| transcriptional regulator, HxlR family [Burkholderia sp. H160] Length = 161 Score = 236 bits (602), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 111/140 (79%), Positives = 127/140 (90%) Query: 1 MCGVARPLDAIGDWWSLLIVRDAFDGLRRFGEFQKSLGLAKNILSARLRNLLAHGIMETV 60 +CGVARPLDAIGDWWSLLIVRDAFDG RRFGEFQ+SLGLAKNILS RLRNL+ HGI++ Sbjct: 11 LCGVARPLDAIGDWWSLLIVRDAFDGARRFGEFQRSLGLAKNILSVRLRNLVTHGILKME 70 Query: 61 PASDGSPYQEYVLTEKGRGLFPLLVALRQWGEDFFFEPDEAHVLLVDRKNGLPVRRLELR 120 PASDGS YQEYVLTEKGRGLFPLLVALRQWGE++FFEPDEAHV+LV++K G+PV +LELR Sbjct: 71 PASDGSAYQEYVLTEKGRGLFPLLVALRQWGEEYFFEPDEAHVVLVEKKTGVPVPKLELR 130 Query: 121 AQDGRIVGAEDTMVRLPPAS 140 +QDGR + EDT+V PPA+ Sbjct: 131 SQDGRTLAPEDTIVLHPPAA 150 >ref|YP_001892423.1| HxlR family transcriptional regulator [Ralstonia pickettii 12J] ref|YP_002983924.1| HxlR family transcriptional regulator [Ralstonia pickettii 12D] gb|ACD28996.1| transcriptional regulator, HxlR family [Ralstonia pickettii 12J] gb|ACS65252.1| transcriptional regulator, HxlR family [Ralstonia pickettii 12D] Length = 163 Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 110/139 (79%), Positives = 121/139 (87%) Query: 1 MCGVARPLDAIGDWWSLLIVRDAFDGLRRFGEFQKSLGLAKNILSARLRNLLAHGIMETV 60 +CGVARPLDAIGD WSLLIVRDAFDGLRRFGEFQ+SLGL+KNIL+ RLRNL+AH I+ETV Sbjct: 13 LCGVARPLDAIGDGWSLLIVRDAFDGLRRFGEFQRSLGLSKNILAVRLRNLVAHDILETV 72 Query: 61 PASDGSPYQEYVLTEKGRGLFPLLVALRQWGEDFFFEPDEAHVLLVDRKNGLPVRRLELR 120 PASDGS YQ+YVLTEKGR LFPLLVALRQWGE F F PDEAHV+LVD+ G PV RLELR Sbjct: 73 PASDGSAYQDYVLTEKGRALFPLLVALRQWGEAFCFAPDEAHVVLVDKATGKPVPRLELR 132 Query: 121 AQDGRIVGAEDTMVRLPPA 139 AQDGR + EDT+V P A Sbjct: 133 AQDGRALAPEDTVVVHPSA 151