BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0211.0004.p (456 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004144570.1| HlyD family type I secretion membrane fusion... 420 e-115 ref|YP_004614517.1| HlyD family type I secretion membrane fusion... 419 e-115 gb|ABM65823.1| MadC [Mesorhizobium sp. R88B] 414 e-113 ref|YP_002296615.1| HlyD family secretion protein [Rhodospirillu... 317 3e-84 ref|YP_002279772.1| type I secretion membrane fusion protein, Hl... 301 1e-79 >ref|YP_004144570.1| HlyD family type I secretion membrane fusion protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV14520.1| type I secretion membrane fusion protein, HlyD family [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 445 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 215/441 (48%), Positives = 297/441 (67%), Gaps = 2/441 (0%) Query: 17 LRHRGLANKDGT-PNDSIRNIALTGWLIIAIFFFGLGTWAVTAPLNGAVVANAVVKVDGN 75 L +R L G DSIR A G LII FF G WA APLNGAV+A+A+VKVDGN Sbjct: 6 LTYRSLPGDAGILAPDSIRVPAYIGLLIIVAFFGIFGGWAAFAPLNGAVLADAIVKVDGN 65 Query: 76 RKSLQHLDGGIVKELHVREGDRVLAGDLLIVLDETQARAEHEVLTQQYAVLRATEVRLLT 135 RKS+QH DGG VKE+ V++GD V GD+++ LD+T+ R+E + QQYA+LRAT+ R+ Sbjct: 66 RKSVQHFDGGTVKEIRVKDGDVVRKGDIMLKLDDTRIRSEFNLYAQQYALLRATDARIRA 125 Query: 136 ELDHGSQLVMPPDLKARSDDPYFKSVWNGQVSQFDTRRASLEGQRSVVREKINQLGSQIV 195 ELD + P D+ +D Y + Q++ +++RAS+ G R ++ +I +L QI Sbjct: 126 ELDGSEVVAFPKDILKEHED-YLRDAMANQIADLESQRASMAGARQILERRIAELEEQIQ 184 Query: 196 GSEAQVKSFTNQIDSVRKEAKDIVPLVERGLIARPRILQLERTAYGLEGQIADANASIAK 255 G +++V+S+ Q+ S E + L++ GL RPRIL+LER+A L+G I + +I Sbjct: 185 GKQSRVESYHAQLQSTINEKASLSKLLKAGLTTRPRILELERSASDLQGLIDENLGAIGG 244 Query: 256 ARQAIAEQEQQIAQFDNDRMTDVTKDLRDTQAKLLEVIPKAMNAKAVLGRMEIRAPYTGR 315 ++Q+ AE E QIAQ N+R ++ L DTQ+ L +++PK A+A + R E+RAPY G+ Sbjct: 245 SQQSKAELESQIAQLTNERRAKLSAMLIDTQSSLSDLVPKMFAAQAAMDRAEVRAPYDGQ 304 Query: 316 VVGLSVFSVGGVIQRGDKILDIVPDEDSLTIEAQVAVEDISDVHPNTRAEVHLTAYKQRI 375 V+ LSVFS+G ++ G ILDIVP E+SL ++AQ+ VEDIS++ P+ AEV T+YKQR Sbjct: 305 VIDLSVFSIGAIVSPGQTILDIVPTENSLIVQAQIRVEDISNLRPDMAAEVRFTSYKQRS 364 Query: 376 VPIIHGDVIQVSADRLTDPKTNNPYYTAFVRIDQDELATMPNIHLYPGMPATVMIPTIQR 435 +PIIHG V ++SADR+TD KT PYY A V +D ELA P I LYPGMPA+VMI T +R Sbjct: 365 IPIIHGRVSRISADRITDSKTGFPYYLADVAVDPVELAAAPQIALYPGMPASVMIVTEER 424 Query: 436 TAFDYIVGPLVMSFNHAFRQK 456 TA DYI+GPLV+SF+ AFRQK Sbjct: 425 TALDYILGPLVVSFHSAFRQK 445 >ref|YP_004614517.1| HlyD family type I secretion membrane fusion protein [Mesorhizobium opportunistum WSM2075] gb|AEH90423.1| type I secretion membrane fusion protein, HlyD family [Mesorhizobium opportunistum WSM2075] Length = 444 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 213/441 (48%), Positives = 296/441 (67%), Gaps = 2/441 (0%) Query: 17 LRHRGLANKDGT-PNDSIRNIALTGWLIIAIFFFGLGTWAVTAPLNGAVVANAVVKVDGN 75 L +R L G DSIR A G LII FF G WA APLNGAV+A+A+VKV+GN Sbjct: 5 LTYRSLPGDTGMLAPDSIRVPAYLGLLIIIAFFGIFGGWAAFAPLNGAVLADAIVKVEGN 64 Query: 76 RKSLQHLDGGIVKELHVREGDRVLAGDLLIVLDETQARAEHEVLTQQYAVLRATEVRLLT 135 RKS+QH DGG VKE+ V++GD V GD+++ LD+T+ R+E + QQYA+LRAT+ R+ Sbjct: 65 RKSVQHFDGGTVKEIRVKDGDVVRKGDIMLKLDDTRIRSEFNLYAQQYALLRATDARIRA 124 Query: 136 ELDHGSQLVMPPDLKARSDDPYFKSVWNGQVSQFDTRRASLEGQRSVVREKINQLGSQIV 195 ELD + P D+ +D Y + Q++ +++RAS+ G + ++ +I +L QI Sbjct: 125 ELDGSEAVAFPKDILKEHED-YLRDAMANQIADLESQRASMAGAKQILERRIAELEEQIQ 183 Query: 196 GSEAQVKSFTNQIDSVRKEAKDIVPLVERGLIARPRILQLERTAYGLEGQIADANASIAK 255 G +++V+S+ Q+ S E + L++ GL RPRIL+LER+A L+G I + +I Sbjct: 184 GKQSRVESYQAQLQSTVDEKASLSKLLKAGLTTRPRILELERSASDLQGLIDENLGAIGG 243 Query: 256 ARQAIAEQEQQIAQFDNDRMTDVTKDLRDTQAKLLEVIPKAMNAKAVLGRMEIRAPYTGR 315 +RQ+ AE E QIAQ N+R ++ L DTQ+ L +++PK A+A + R E+RAPY G+ Sbjct: 244 SRQSKAELESQIAQLTNERRAKLSAMLIDTQSNLADLVPKMFAAQAAMDRAEVRAPYDGQ 303 Query: 316 VVGLSVFSVGGVIQRGDKILDIVPDEDSLTIEAQVAVEDISDVHPNTRAEVHLTAYKQRI 375 V+ LSVFS+G ++ G ILDIVP E+SL ++AQ+ VEDIS++ P+ AEV T+YKQR Sbjct: 304 VMDLSVFSIGAIVAPGQTILDIVPTENSLIVQAQIRVEDISNLRPDMAAEVRFTSYKQRS 363 Query: 376 VPIIHGDVIQVSADRLTDPKTNNPYYTAFVRIDQDELATMPNIHLYPGMPATVMIPTIQR 435 +PIIHG V ++SADR+TD KT PYY A V +D ELA P I LYPGMPA VMI T +R Sbjct: 364 IPIIHGRVTRISADRITDSKTGFPYYLADVAVDPGELAAAPQIALYPGMPAAVMIVTEER 423 Query: 436 TAFDYIVGPLVMSFNHAFRQK 456 TA DY++GPLV+SF+ AFRQK Sbjct: 424 TALDYVLGPLVVSFHSAFRQK 444 >gb|ABM65823.1| MadC [Mesorhizobium sp. R88B] Length = 445 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 212/441 (48%), Positives = 297/441 (67%), Gaps = 2/441 (0%) Query: 17 LRHRGLANKDGT-PNDSIRNIALTGWLIIAIFFFGLGTWAVTAPLNGAVVANAVVKVDGN 75 L +R L + G DSIR A G LII FF G WA APLNGAV+A+A+VKV+GN Sbjct: 6 LTYRTLPGETGLLAPDSIRVPAYVGLLIIVAFFGIFGGWAALAPLNGAVLADAIVKVEGN 65 Query: 76 RKSLQHLDGGIVKELHVREGDRVLAGDLLIVLDETQARAEHEVLTQQYAVLRATEVRLLT 135 RKS+QH DGG VKE+ V++GD V GD+++ LD+T+ R+E + QQYA+LRAT+ R+ Sbjct: 66 RKSVQHFDGGTVKEIRVKDGDVVRKGDIMLKLDDTRIRSEFNLYAQQYALLRATDARIRA 125 Query: 136 ELDHGSQLVMPPDLKARSDDPYFKSVWNGQVSQFDTRRASLEGQRSVVREKINQLGSQIV 195 ELD + + P D+ +D Y + Q++ +++RAS+ G R ++ +I +L QI Sbjct: 126 ELDGSAAVAFPKDILKEHED-YLRDAMANQIADLESQRASMAGARQILERRIAELEEQIQ 184 Query: 196 GSEAQVKSFTNQIDSVRKEAKDIVPLVERGLIARPRILQLERTAYGLEGQIADANASIAK 255 G +++V+S+ Q+ S E + L++ GL RPRIL+LER+A L+G I + +I Sbjct: 185 GKQSRVESYRAQLQSTIDEKASLSKLLKAGLTTRPRILELERSASDLQGLIDENLGAIGG 244 Query: 256 ARQAIAEQEQQIAQFDNDRMTDVTKDLRDTQAKLLEVIPKAMNAKAVLGRMEIRAPYTGR 315 ++Q+ AE E QIAQ +R ++ L +TQ+ L +++PK A+A + R E+RAPY G+ Sbjct: 245 SQQSKAELESQIAQLTFERRAKLSAMLIETQSNLADLVPKMFAAQAAMDRAEVRAPYDGQ 304 Query: 316 VVGLSVFSVGGVIQRGDKILDIVPDEDSLTIEAQVAVEDISDVHPNTRAEVHLTAYKQRI 375 V+ LSVFS+G ++ G ILDIVP E+SL ++AQV VEDIS++ P+ AEV T+YKQR Sbjct: 305 VMDLSVFSIGAIVSPGQTILDIVPTENSLIVQAQVRVEDISNLRPDMAAEVRFTSYKQRS 364 Query: 376 VPIIHGDVIQVSADRLTDPKTNNPYYTAFVRIDQDELATMPNIHLYPGMPATVMIPTIQR 435 +PIIHG V ++SADR+TD KT PYY A V +D ELA I LYPGMPA+VMI T +R Sbjct: 365 IPIIHGRVTRISADRITDSKTGFPYYLADVAVDPGELAAASQIALYPGMPASVMIVTEER 424 Query: 436 TAFDYIVGPLVMSFNHAFRQK 456 TA DYI+GPLV+SF+ AFRQK Sbjct: 425 TALDYIIGPLVVSFHSAFRQK 445 >ref|YP_002296615.1| HlyD family secretion protein [Rhodospirillum centenum SW] gb|ACI97802.1| HlyD family secretion protein [Rhodospirillum centenum SW] Length = 453 Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 172/424 (40%), Positives = 248/424 (58%) Query: 32 SIRNIALTGWLIIAIFFFGLGTWAVTAPLNGAVVANAVVKVDGNRKSLQHLDGGIVKELH 91 S + +A++G L++ I F G+GTWA APL+ A +A V+ V N K +QHL+GGIVKE+ Sbjct: 29 SFKGVAISGLLLLGITFGGVGTWAAVAPLSSAAIATGVLTVASNNKMIQHLEGGIVKEIR 88 Query: 92 VREGDRVLAGDLLIVLDETQARAEHEVLTQQYAVLRATEVRLLTELDHGSQLVMPPDLKA 151 V+EGD V AG L+VLD T+A A+ +++ Q A E RLL E + P L Sbjct: 89 VKEGDMVAAGATLVVLDPTRAEAQVDIVRGQLDATLALEARLLAERSGADAVRFPDSLVK 148 Query: 152 RSDDPYFKSVWNGQVSQFDTRRASLEGQRSVVREKINQLGSQIVGSEAQVKSFTNQIDSV 211 + DP ++ + Q F+ RR SLEGQ +++R++I Q QI G EAQ S QI + Sbjct: 149 NTSDPDVAAIIDSQKKLFEARRLSLEGQVTILRKRIVQAREQIGGLEAQRDSNDRQITLI 208 Query: 212 RKEAKDIVPLVERGLIARPRILQLERTAYGLEGQIADANASIAKARQAIAEQEQQIAQFD 271 E K + L E+G R RIL LER A L G+ +++ +Q I E E QI Q Sbjct: 209 EDELKGLRELYEKGYAPRTRILALEREASRLLGERGQYGGEVSRVQQVIGETELQIIQVR 268 Query: 272 NDRMTDVTKDLRDTQAKLLEVIPKAMNAKAVLGRMEIRAPYTGRVVGLSVFSVGGVIQRG 331 + +V K L++TQ ++ ++ + A+ VL R I +P G+V GL V +VGGV+ G Sbjct: 269 KNFQEEVAKQLQETQNQIFDLRERLRAAEDVLARTVITSPEAGKVTGLKVHTVGGVVPPG 328 Query: 332 DKILDIVPDEDSLTIEAQVAVEDISDVHPNTRAEVHLTAYKQRIVPIIHGDVIQVSADRL 391 D +L IVPD D L IEAQ+ V D+ +VH +A+VHLTA+ QRI P++ G V VS DR Sbjct: 329 DVMLQIVPDNDDLIIEAQLQVTDVDNVHVGQQADVHLTAFSQRITPVVTGTVENVSGDRF 388 Query: 392 TDPKTNNPYYTAFVRIDQDELATMPNIHLYPGMPATVMIPTIQRTAFDYIVGPLVMSFNH 451 D +T PYYT + + ++E + ++ L PGMPA I T ++T Y+ PL+ N Sbjct: 389 QDQRTGLPYYTVRIVVSEEERVKLGDLQLLPGMPADAYIKTGEKTPLRYLFDPLIQVINR 448 Query: 452 AFRQ 455 +FR+ Sbjct: 449 SFRE 452 >ref|YP_002279772.1| type I secretion membrane fusion protein, HlyD family [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI53546.1| type I secretion membrane fusion protein, HlyD family [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 480 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 165/444 (37%), Positives = 262/444 (59%), Gaps = 3/444 (0%) Query: 13 PGVVLRHRGLANKDGTPNDSIRNIALTGWLIIAIFFFGLGTWAVTAPLNGAVVANAVVKV 72 P + + RG A +P +R + TG L+I +F GLG W+ APL+ A VA+ V++ Sbjct: 38 PVIEQKQRGPAAP--SPMPVLRGVVWTGNLLILVFVVGLGIWSALAPLHSAAVASGVIEP 95 Query: 73 DGNRKSLQHLDGGIVKELHVREGDRVLAGDLLIVLDETQARAEHEVLTQQYAVLRATEVR 132 + +RK++QHL+GGIV+ + VR GD V+AG ++I LD+T++R+E + + Q + R Sbjct: 96 ETSRKTIQHLEGGIVRRILVRNGDTVMAGQIVIELDDTKSRSERDSIQGQLWDAEGSRAR 155 Query: 133 LLTELDHGSQLVMPPDLKARSDD-PYFKSVWNGQVSQFDTRRASLEGQRSVVREKINQLG 191 LL E G + P DL+A D P ++ GQ F+ RR ++ + + EKI Q+ Sbjct: 156 LLAEQTGGDHVAYPDDLRAAMDKYPSVSAILTGQQKIFEARRRVMQAEIQIGNEKIAQVR 215 Query: 192 SQIVGSEAQVKSFTNQIDSVRKEAKDIVPLVERGLIARPRILQLERTAYGLEGQIADANA 251 +IVG AQ + ++ ++E + + L +GL R R+L LER L+GQ A Sbjct: 216 QEIVGLGAQKAALADRAAISQEELEQVTILTAKGLERRSRLLNLEREKADLDGQQGQVGA 275 Query: 252 SIAKARQAIAEQEQQIAQFDNDRMTDVTKDLRDTQAKLLEVIPKAMNAKAVLGRMEIRAP 311 IA+A Q I+E + +A+ ++DR+++V + +RDT+++++++ + L R +IRAP Sbjct: 276 QIARAYQVISESQVDLAKLESDRLSEVAQGMRDTESRIMQLRERLRAIDDQLSRTDIRAP 335 Query: 312 YTGRVVGLSVFSVGGVIQRGDKILDIVPDEDSLTIEAQVAVEDISDVHPNTRAEVHLTAY 371 G ++ L + + GGVI G+ ++D++P D L + A V EDI+ VH A+VHL Y Sbjct: 336 EDGTIMNLRIHTSGGVIGAGEPLVDLLPRSDRLIVSAHVRPEDINLVHAGLEAQVHLLPY 395 Query: 372 KQRIVPIIHGDVIQVSADRLTDPKTNNPYYTAFVRIDQDELATMPNIHLYPGMPATVMIP 431 QR VP++ G V VSADRLTD ++ PYY A +R+ + LA M ++ L GMPA +I Sbjct: 396 NQRRVPLLKGRVEYVSADRLTDTQSGQPYYAATIRVTDERLAKMRDVELVAGMPAQTLIE 455 Query: 432 TIQRTAFDYIVGPLVMSFNHAFRQ 455 T + + Y V PL+ SFN AFR+ Sbjct: 456 TGKSSVALYAVRPLLDSFNRAFRE 479