BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0210.0005.p (398 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767938.1| hypothetical protein blr1298 [Bradyrhizobium ja... 580 e-163 ref|ZP_01044830.1| hypothetical protein NB311A_04849 [Nitrobacte... 558 e-157 ref|YP_316897.1| hypothetical protein Nwi_0278 [Nitrobacter wino... 545 e-153 ref|YP_001237096.1| hypothetical protein BBta_0934 [Bradyrhizobi... 520 e-145 ref|YP_001208421.1| hypothetical protein BRADO6601 [Bradyrhizobi... 511 e-142 >ref|NP_767938.1| hypothetical protein blr1298 [Bradyrhizobium japonicum USDA 110] dbj|BAC46563.1| blr1298 [Bradyrhizobium japonicum USDA 110] Length = 404 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 288/403 (71%), Positives = 333/403 (82%), Gaps = 13/403 (3%) Query: 6 IRLCPGFVALALAASAPSVLAGEAGALPPSVANAMAQ----------ASPQAIMEYRRKL 55 IR V AL AP+ G + ALPP+V +A AQ ASP A++EY RKL Sbjct: 5 IRKSLALVPFALVLLAPAARGGASDALPPAVRDAKAQLLSQFFAQGGASP-AVLEYHRKL 63 Query: 56 QEYQEARAAFEQDASAYWNAIAEKRRGRNAKRRDRVQTSLDDYVLQQPPVYEGPKRPVNP 115 EYQ ARAAF+++A AYW+ I+EKR+ RNAKRR Q +LDDYVL+ PP+Y GPKRPVNP Sbjct: 64 GEYQAARAAFDEEAGAYWSQISEKRKTRNAKRRSGQQITLDDYVLEHPPLYSGPKRPVNP 123 Query: 116 APEEEEGKPPRPPKTLPVASDLVRAAAEQFQFTPQRPASEVEFKRAYARYARAAGLTPEQ 175 PEE +P + P +PV +DL+RAA E +QFTPQRP+SEVEFKRAYARYA A+GLT EQ Sbjct: 124 EPEETPERPTKKP--IPVVADLLRAAQELYQFTPQRPSSEVEFKRAYARYALASGLTREQ 181 Query: 176 AVRVYSFETGGTGTYDVQAGIEHGGKRAISTAMGYNQLLTTNTVELLAEQGHEFVRDLTE 235 AVRVYSFETGGTG+YDVQAGIEHGGKRAISTAMGYNQLLTTN+VELLAEQGHEF+R L++ Sbjct: 182 AVRVYSFETGGTGSYDVQAGIEHGGKRAISTAMGYNQLLTTNSVELLAEQGHEFIRALSD 241 Query: 236 RVARTQGPARKAMEHKLAVLKKMVAFTRTVPDDWSAHQRLADTPQGWACHAMVLDIDVGP 295 +VART GPAR+++EHKL VLKKMVA ++VPD WS H+++ +T QGWA HAMVLD+D+GP Sbjct: 242 KVARTSGPARQSLEHKLTVLKKMVAHAKSVPDTWSEHEKIGNTAQGWAMHAMVLDVDIGP 301 Query: 296 MLQTHKLLTSVIFARNKGYSRPLTAAELEMMNLTGDGTGLDMVTMPQAMREQVPTSNFFQ 355 MLQTHKLLTSV+FAR KGY+RPLTAAELEMMNLTGDGTGLDMVTMPQAMREQVPTSNFFQ Sbjct: 302 MLQTHKLLTSVLFARAKGYARPLTAAELEMMNLTGDGTGLDMVTMPQAMREQVPTSNFFQ 361 Query: 356 RSGYERNPVAIRHNTVARLLAVTNERMDFNSNKPGAKELAAAF 398 R GYERNPVAIRHNTVA+LLAVT+ RMD NSN GA+ELA AF Sbjct: 362 RGGYERNPVAIRHNTVAKLLAVTDTRMDSNSNNAGARELAGAF 404 >ref|ZP_01044830.1| hypothetical protein NB311A_04849 [Nitrobacter sp. Nb-311A] gb|EAQ37611.1| hypothetical protein NB311A_04849 [Nitrobacter sp. Nb-311A] Length = 398 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 278/401 (69%), Positives = 327/401 (81%), Gaps = 6/401 (1%) Query: 1 MRPQLIRLCPGFVALALAASAPSVLAGEAGALPPSVANAMAQA-SPQAIMEYRRKLQEYQ 59 M+ ++IR C V AL AP + A P AMAQA +P I +YRR+L+ Y+ Sbjct: 1 MQNRVIRRCHQIVVGALLL-APLADVSDGVATPALPVGAMAQAATPTVIADYRRRLKAYE 59 Query: 60 EARAAFEQDASAYWNAIAEKRRGRNAKRRDRVQTSLDDYVLQQPPVYEGPKRPVNPAPEE 119 EARAAFE+DA AYWNAIAEKRR RNAKRR+R +LDDYVL +PP+Y+GPKRPVNP PEE Sbjct: 60 EARAAFEEDAGAYWNAIAEKRRIRNAKRRNRQPVTLDDYVLVRPPLYDGPKRPVNPEPEE 119 Query: 120 EEGKPPRPPKTLPVASDLVRAAAEQFQFTPQRPASEVEFKRAYARYARAAGLTPEQAVRV 179 E + PR K++PV +D +RAAAEQFQF PQRP SEV+FKRAYAR ARA GLT EQAVRV Sbjct: 120 E--RSPRRRKSIPVVADFLRAAAEQFQFAPQRPKSEVDFKRAYARVARAYGLTKEQAVRV 177 Query: 180 YSFETGGTGTYDVQAGIEHG--GKRAISTAMGYNQLLTTNTVELLAEQGHEFVRDLTERV 237 YSFETGG G +D+Q+G+ G RAISTA+GYNQLLTTN+VELLAEQG + +R L E+ Sbjct: 178 YSFETGGNGNHDMQSGLSTSRPGSRAISTAIGYNQLLTTNSVELLAEQGDDILRALGEKA 237 Query: 238 ARTQGPARKAMEHKLAVLKKMVAFTRTVPDDWSAHQRLADTPQGWACHAMVLDIDVGPML 297 AR GP R A E K+A++K+MVA+ R+ PD WSAHQ+LADTP+GWA HA+VLDIDVGP+L Sbjct: 238 ARLSGPQRAAAERKIAMVKRMVAYARSAPDTWSAHQKLADTPKGWAIHALVLDIDVGPLL 297 Query: 298 QTHKLLTSVIFARNKGYSRPLTAAELEMMNLTGDGTGLDMVTMPQAMREQVPTSNFFQRS 357 QTHKLLTS+IFARNKGY+RPLTAAELEMMNLTGDGTGLDMVTMPQAMRE+VPT+NFFQR Sbjct: 298 QTHKLLTSIIFARNKGYARPLTAAELEMMNLTGDGTGLDMVTMPQAMRERVPTANFFQRR 357 Query: 358 GYERNPVAIRHNTVARLLAVTNERMDFNSNKPGAKELAAAF 398 GYERNPVAIR++TVA+LLAVT+ RMD NS KPGA+ELAAAF Sbjct: 358 GYERNPVAIRYDTVAKLLAVTDARMDSNSAKPGARELAAAF 398 >ref|YP_316897.1| hypothetical protein Nwi_0278 [Nitrobacter winogradskyi Nb-255] gb|ABA03545.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 398 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 261/351 (74%), Positives = 301/351 (85%), Gaps = 4/351 (1%) Query: 50 EYRRKLQEYQEARAAFEQDASAYWNAIAEKRRGRNAKRRDRVQTSLDDYVLQQPPVYEGP 109 +YRRKL+ YQEARAAFEQ+A AYWNAIA+KRR RNAKRRDR SLDDYVL PP+Y+GP Sbjct: 50 DYRRKLKAYQEARAAFEQEAGAYWNAIADKRRIRNAKRRDRQPVSLDDYVLVHPPLYDGP 109 Query: 110 KRPVNPAPEEEEGKPPRPPKTLPVASDLVRAAAEQFQFTPQRPASEVEFKRAYARYARAA 169 +RP+NP PEEE + PR K++PV +D +RAAAEQFQFTPQRP +E +FKRAYA ARA Sbjct: 110 QRPINPEPEEE--RSPRQRKSIPVVADFLRAAAEQFQFTPQRPRTETDFKRAYASVARAY 167 Query: 170 GLTPEQAVRVYSFETGGTGTYDVQAGIEHG--GKRAISTAMGYNQLLTTNTVELLAEQGH 227 GLT EQAVRVYSFETGG G +D+Q+G+ G RAISTA+GYNQLLTTN+VELLAEQG Sbjct: 168 GLTKEQAVRVYSFETGGNGNHDMQSGLSTSRPGSRAISTAIGYNQLLTTNSVELLAEQGD 227 Query: 228 EFVRDLTERVARTQGPARKAMEHKLAVLKKMVAFTRTVPDDWSAHQRLADTPQGWACHAM 287 + +R L E+ AR+ GP R A E K+AV+K+MVA+ R+VPD WSAHQ+LADTP+GWA HA+ Sbjct: 228 DLLRALGEKAARSSGPQRAAAERKIAVVKRMVAYARSVPDTWSAHQKLADTPKGWAIHAL 287 Query: 288 VLDIDVGPMLQTHKLLTSVIFARNKGYSRPLTAAELEMMNLTGDGTGLDMVTMPQAMREQ 347 VLDIDVGP+LQTHKLLTS+IFARNKGY+RPLTAAELEMMNLTGDGTG DMVTMP MRE+ Sbjct: 288 VLDIDVGPLLQTHKLLTSIIFARNKGYARPLTAAELEMMNLTGDGTGFDMVTMPPVMRER 347 Query: 348 VPTSNFFQRSGYERNPVAIRHNTVARLLAVTNERMDFNSNKPGAKELAAAF 398 VPT+NFFQR GYERNPVAIRHNTVA+LLAVTN RMD NS KPGA+ELAAAF Sbjct: 348 VPTANFFQRRGYERNPVAIRHNTVAKLLAVTNARMDSNSAKPGARELAAAF 398 >ref|YP_001237096.1| hypothetical protein BBta_0934 [Bradyrhizobium sp. BTAi1] gb|ABQ33190.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 393 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 277/399 (69%), Positives = 322/399 (80%), Gaps = 7/399 (1%) Query: 1 MRPQLIRLCPGFVALALAASAPSVLAGEAGALPPSVANAMAQ-ASPQAIMEYRRKLQEYQ 59 M Q IR +A A+A AP + AGE G+ S +A+AQ AS AI EYRRKL EYQ Sbjct: 1 MLHQPIRKLALILACAVAG-APPLFAGEPGSAIAS-RDALAQMASSDAIAEYRRKLAEYQ 58 Query: 60 EARAAFEQDASAYWNAIAEKRRGRNAKRRDRVQTSLDDYVLQQPPVYEGPKRPVNPAPEE 119 +ARA FEQ+A AYW AIA+KRR RNAKRRDR LDDYVL+QPPVY GPKRPVNP PE Sbjct: 59 QARAEFEQEAGAYWKAIADKRRLRNAKRRDRQPIGLDDYVLEQPPVYSGPKRPVNPEPEP 118 Query: 120 EEGKPPRPPKTLPVASDLVRAAAEQFQFTPQRPASEVEFKRAYARYARAAGLTPEQAVRV 179 E R K +PV +DL++AA + FQ++PQRP ++V+FKRAYAR+A A+GLT EQAVRV Sbjct: 119 EGEPRER--KYIPVVADLLKAAQQHFQWSPQRPTNDVDFKRAYARFAAASGLTREQAVRV 176 Query: 180 YSFETGGTGTYDVQAGIEHGGKRAISTAMGYNQLLTTNTVELLAEQGHEFVRDLTERVAR 239 Y+FETGG G +D Q+G + G RAISTA+GYNQLLTTNTVELLAEQG F R L ERVA+ Sbjct: 177 YAFETGGNGKHDSQSGFK--GNRAISTAIGYNQLLTTNTVELLAEQGPLFFRLLGERVAQ 234 Query: 240 TQGPARKAMEHKLAVLKKMVAFTRTVPDDWSAHQRLADTPQGWACHAMVLDIDVGPMLQT 299 T GP+R A+EHKL+VLKKMVA R+VPDDWSAH+++ +T QGWA HAMVLDIDVGPMLQT Sbjct: 235 TSGPSRAALEHKLSVLKKMVAIARSVPDDWSAHEKIGNTEQGWAMHAMVLDIDVGPMLQT 294 Query: 300 HKLLTSVIFARNKGYSRPLTAAELEMMNLTGDGTGLDMVTMPQAMREQVPTSNFFQRSGY 359 HKLLTSV+FAR KGY+RPL+AAELEMMNLTGDGTG DMVTMP MR+QVPT+NFFQR GY Sbjct: 295 HKLLTSVLFARAKGYTRPLSAAELEMMNLTGDGTGFDMVTMPLDMRDQVPTANFFQRGGY 354 Query: 360 ERNPVAIRHNTVARLLAVTNERMDFNSNKPGAKELAAAF 398 ERNPVA+RHNTVA+LLAVT+ RMD S+ PGAKELAAAF Sbjct: 355 ERNPVAVRHNTVAKLLAVTDARMDSLSSLPGAKELAAAF 393 >ref|YP_001208421.1| hypothetical protein BRADO6601 [Bradyrhizobium sp. ORS 278] emb|CAL80206.1| conserved hypothetical protein; putative exported protein [Bradyrhizobium sp. ORS 278] Length = 393 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 264/362 (72%), Positives = 303/362 (83%), Gaps = 5/362 (1%) Query: 38 NAMAQ-ASPQAIMEYRRKLQEYQEARAAFEQDASAYWNAIAEKRRGRNAKRRDRVQTSLD 96 +A+AQ ASP AI EY+RKL EYQ+ARAAF+Q+A AYW AIA+KRR RNAKRRDR LD Sbjct: 36 DALAQMASPAAIAEYQRKLAEYQQARAAFDQEAGAYWKAIADKRRIRNAKRRDRQPIGLD 95 Query: 97 DYVLQQPPVYEGPKRPVNPAPEEEEGKPPRPPKTLPVASDLVRAAAEQFQFTPQRPASEV 156 DYVL+QPPVY GPKRPVNP PE E R K +PV +DL++AA E FQ++PQRP +++ Sbjct: 96 DYVLEQPPVYTGPKRPVNPEPEPEGEPRER--KYIPVVADLLKAAQEHFQWSPQRPTNDI 153 Query: 157 EFKRAYARYARAAGLTPEQAVRVYSFETGGTGTYDVQAGIEHGGKRAISTAMGYNQLLTT 216 +FKRAYAR+A ++GLT EQAVRVYSFETGG G +D Q+G + G R ISTA+GYNQLLTT Sbjct: 154 DFKRAYARFAASSGLTREQAVRVYSFETGGNGRHDSQSGFK--GNRPISTAIGYNQLLTT 211 Query: 217 NTVELLAEQGHEFVRDLTERVARTQGPARKAMEHKLAVLKKMVAFTRTVPDDWSAHQRLA 276 NTVELLAEQG F R L ERVA+T GPAR AMEHKL VLKKMVA R+VPDDWSAH+++ Sbjct: 212 NTVELLAEQGPLFTRLLGERVAQTSGPARGAMEHKLNVLKKMVAIARSVPDDWSAHEKIG 271 Query: 277 DTPQGWACHAMVLDIDVGPMLQTHKLLTSVIFARNKGYSRPLTAAELEMMNLTGDGTGLD 336 +T QGWA HAMVLDIDVGPMLQTHKLLTSV+FAR KGY+RPL+AAELEMMNLTGDGTG D Sbjct: 272 NTEQGWAMHAMVLDIDVGPMLQTHKLLTSVLFARAKGYTRPLSAAELEMMNLTGDGTGFD 331 Query: 337 MVTMPQAMREQVPTSNFFQRSGYERNPVAIRHNTVARLLAVTNERMDFNSNKPGAKELAA 396 +VTMP MR+QVPT+NFFQR GYERNPVA+RHNTVARLLAVT+ RMD S PGAKELAA Sbjct: 332 IVTMPLEMRDQVPTANFFQRGGYERNPVAVRHNTVARLLAVTDARMDSLSVLPGAKELAA 391 Query: 397 AF 398 AF Sbjct: 392 AF 393