BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0210.0004.p         (99 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767939.1| hypothetical protein bll1299 [Bradyrhizobium ja...   156   1e-36
ref|YP_001237097.1| hypothetical protein BBta_0935 [Bradyrhizobi...   139   1e-31
ref|YP_001208420.1| putative signal peptide [Bradyrhizobium sp. ...   137   5e-31
ref|NP_949852.1| hypothetical protein RPA4518 [Rhodopseudomonas ...   133   1e-29
ref|YP_001993974.1| hypothetical protein Rpal_5010 [Rhodopseudom...   132   1e-29

>ref|NP_767939.1| hypothetical protein bll1299 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46564.1| bll1299 [Bradyrhizobium japonicum USDA 110]
          Length = 100

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/97 (80%), Positives = 82/97 (84%), Gaps = 1/97 (1%)

Query: 4  FLTKTFIATAAFAALTTCAFAQ-EAAPWELKPDMGYAYDKDGKTWSYKMGTNNAGTLLKG 62
          F TKTF   AA  A T  A AQ EA PWELKPDMGYAYD+DGKT+SYKMGT+NAG LLKG
Sbjct: 3  FSTKTFAIAAALGAFTAPALAQTEATPWELKPDMGYAYDRDGKTYSYKMGTSNAGELLKG 62

Query: 63 AKKVPKGTLFFIGQNGQLYMRSGPYLEGDGKFKFGSN 99
          AKKVPKGTLFFIG NGQLYMRSGPYLEGDGKFKFG +
Sbjct: 63 AKKVPKGTLFFIGHNGQLYMRSGPYLEGDGKFKFGPD 99


>ref|YP_001237097.1| hypothetical protein BBta_0935 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33191.1| putative exported protein of unknown function [Bradyrhizobium sp.
          BTAi1]
          Length = 100

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 75/99 (75%)

Query: 1  MTHFLTKTFIATAAFAALTTCAFAQEAAPWELKPDMGYAYDKDGKTWSYKMGTNNAGTLL 60
          M   + K+ IA  A  A+T+   A    PWEL+PDMGYAY KDGKT +Y+MGT NA  LL
Sbjct: 1  MRSAVVKSLIAAGALCAMTSVTRAAPPEPWELRPDMGYAYGKDGKTLAYRMGTKNADMLL 60

Query: 61 KGAKKVPKGTLFFIGQNGQLYMRSGPYLEGDGKFKFGSN 99
          KGAKKVPKGTLFF+GQNGQLYMR+ PYLEGDG F FG++
Sbjct: 61 KGAKKVPKGTLFFVGQNGQLYMRTAPYLEGDGSFSFGAD 99


>ref|YP_001208420.1| putative signal peptide [Bradyrhizobium sp. ORS 278]
 emb|CAL80205.1| conserved hypothetical protein; putative signal peptide
          [Bradyrhizobium sp. ORS 278]
          Length = 100

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/95 (69%), Positives = 72/95 (75%)

Query: 5  LTKTFIATAAFAALTTCAFAQEAAPWELKPDMGYAYDKDGKTWSYKMGTNNAGTLLKGAK 64
          + KT +A     ALT    A    PWELKPDMGYAY KDGKT +YKMGT NA  LLKGAK
Sbjct: 5  VLKTLLAMGTLCALTGVTLAAPPEPWELKPDMGYAYGKDGKTLAYKMGTKNADMLLKGAK 64

Query: 65 KVPKGTLFFIGQNGQLYMRSGPYLEGDGKFKFGSN 99
          KVPKGTLFFIGQNGQLYMR+ PYLEGDG F FG++
Sbjct: 65 KVPKGTLFFIGQNGQLYMRTAPYLEGDGSFSFGAD 99


>ref|NP_949852.1| hypothetical protein RPA4518 [Rhodopseudomonas palustris CGA009]
 emb|CAE29958.1| hypothetical protein RPA4518 [Rhodopseudomonas palustris CGA009]
          Length = 111

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/99 (62%), Positives = 74/99 (74%)

Query: 1   MTHFLTKTFIATAAFAALTTCAFAQEAAPWELKPDMGYAYDKDGKTWSYKMGTNNAGTLL 60
           MT F T   I  A+ AALT+ A A+   PW L PD GY Y +DGKT +YKMGT+NA  L 
Sbjct: 12  MTAFRTTLLITAASLAALTSVAHAEAGEPWVLTPDKGYGYTRDGKTLTYKMGTSNAKELF 71

Query: 61  KGAKKVPKGTLFFIGQNGQLYMRSGPYLEGDGKFKFGSN 99
           KGA+KVP+ TLFF+G NGQLYMRSGP+LEGDG FKFG++
Sbjct: 72  KGARKVPRETLFFVGANGQLYMRSGPFLEGDGSFKFGAD 110


>ref|YP_001993974.1| hypothetical protein Rpal_5010 [Rhodopseudomonas palustris TIE-1]
 gb|ACF03499.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 100

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/99 (62%), Positives = 74/99 (74%)

Query: 1  MTHFLTKTFIATAAFAALTTCAFAQEAAPWELKPDMGYAYDKDGKTWSYKMGTNNAGTLL 60
          MT F T   I  A+ AALT+ A A+   PW L PD GY Y +DGKT +YKMGT+NA  L 
Sbjct: 1  MTAFRTTLLITAASLAALTSVAHAEAGEPWVLTPDKGYGYTRDGKTLTYKMGTSNAKELF 60

Query: 61 KGAKKVPKGTLFFIGQNGQLYMRSGPYLEGDGKFKFGSN 99
          KGA+KVP+ TLFF+G NGQLYMRSGP+LEGDG FKFG++
Sbjct: 61 KGARKVPRETLFFVGANGQLYMRSGPFLEGDGSFKFGAD 99