BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0209.0013.p (532 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770689.1| O-succinylbenzoic acid--CoA ligase [Bradyrhizob... 897 0.0 ref|YP_001205740.1| putative O-succinylbenzoate--CoA ligase [Bra... 840 0.0 ref|YP_001239756.1| putative O-succinylbenzoate--CoA ligase [Bra... 835 0.0 ref|ZP_08629063.1| long-chain-fatty-acid--CoA ligase [Bradyrhizo... 825 0.0 ref|YP_522291.1| O-succinylbenzoate--CoA ligase [Rhodoferax ferr... 578 e-163 >ref|NP_770689.1| O-succinylbenzoic acid--CoA ligase [Bradyrhizobium japonicum USDA 110] dbj|BAC49314.1| blr4049 [Bradyrhizobium japonicum USDA 110] Length = 530 Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/530 (82%), Positives = 475/530 (89%), Gaps = 1/530 (0%) Query: 1 MDWSQHAIPPMRLEPRFGDRVVPAFPERPGSLWAMIADAVAQNGDGEALVCGATRLSWRE 60 MDWSQHA+P MRLEPRFGDRVVPAF +RPGS+WAMIA+AVAQN DGEAL+CG RLSWR+ Sbjct: 1 MDWSQHALPSMRLEPRFGDRVVPAFVKRPGSVWAMIAEAVAQNADGEALICGHVRLSWRQ 60 Query: 61 VAEKSAKVAAGFAKLGLTPGDRVAILLGNRIEFVLTMFAAAHAGLVTVLLSTRQQKPEIA 120 V +++A++A GF KLGL GDRVAILLGNRIEF L +FAAAH GLVTVLLSTRQQKPEIA Sbjct: 61 VVDRAARIAEGFRKLGLKRGDRVAILLGNRIEFPLLLFAAAHEGLVTVLLSTRQQKPEIA 120 Query: 121 YVLNDCGATLLVHEAALADRIPDAADIPGLKHRISVSDD-GASQFAGLADNAPAQAPAQV 179 YVL DCGA +L+HEA LA R+PDA D+P + HR++V DD AS+FA LAD A A AP V Sbjct: 121 YVLTDCGAKILIHEAGLAGRLPDARDVPDVIHRVAVDDDPHASRFAVLADKAAAAAPVDV 180 Query: 180 REEDTAMILYTSGTTGRPKGAMLAHCNIVHSSMVFASCLKLTRADRSIAAVPLAHVTGAV 239 EEDTAMILYTSGTTG+PKGAMLAHCNIVHSSMVFASCL+LT ADRSIAAVPL HVTG V Sbjct: 181 SEEDTAMILYTSGTTGKPKGAMLAHCNIVHSSMVFASCLQLTEADRSIAAVPLGHVTGVV 240 Query: 240 ANITTMARCAGALIIMPEFKASEYLKVAARERVTYTVMVPAMYNLCLMQPDFDSYDLSSW 299 ANITTM RC GALIIMP FKA++YLK+AARERVTYTVMVPAMYNLCL+QPDFDSYDLSSW Sbjct: 241 ANITTMIRCGGALIIMPAFKAADYLKLAARERVTYTVMVPAMYNLCLLQPDFDSYDLSSW 300 Query: 300 RIGGFGGAPMPVATIEKLDAKIPGLKLANCYGATETTSPSTLMPGELTAAHIDSVGLPCP 359 RIGGFGGAPMPVATIE+L A IPGLKL NCYGATETTSPST+MPGELTA+HIDSVGLPCP Sbjct: 301 RIGGFGGAPMPVATIERLKATIPGLKLMNCYGATETTSPSTIMPGELTASHIDSVGLPCP 360 Query: 360 GAEIVVMGADGRELPRGEIGELWIRSASVIKGYWNNPKATAESFTAGFWHSGDLGSIDVK 419 GA IV MG DGRELP GEIGELWI+SASVIKGYWNNPKAT ESFT GFWHSGDLGS+D Sbjct: 361 GARIVAMGPDGRELPHGEIGELWIQSASVIKGYWNNPKATTESFTGGFWHSGDLGSVDAD 420 Query: 420 NFVRVFDRQKDMINRGGLKIYSAEVESVLAGHPAVVESAIIAKPCPVLGERVHAVIVTRT 479 FVRVFDRQKDMINRGGLKIYSAEVESVLAGHPAV+ESAIIA+ CPVLGERVHAV+VTRT Sbjct: 421 GFVRVFDRQKDMINRGGLKIYSAEVESVLAGHPAVIESAIIARACPVLGERVHAVVVTRT 480 Query: 480 DVNAENLRAWCAERLSDYKVPETMALTSEPLPRNANGKVIKRQIRESLSS 529 V + LRAWCAERLSDYKVPETMA+T+EPLPRNANGKV+KRQ+RE L + Sbjct: 481 PVAGDVLRAWCAERLSDYKVPETMAITTEPLPRNANGKVLKRQLREHLGT 530 >ref|YP_001205740.1| putative O-succinylbenzoate--CoA ligase [Bradyrhizobium sp. ORS 278] emb|CAL77514.1| putative O-succinylbenzoate--CoA ligase [Bradyrhizobium sp. ORS 278] Length = 531 Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/531 (76%), Positives = 459/531 (86%), Gaps = 2/531 (0%) Query: 1 MDWSQHA-IPPMRLEPRFGDRVVPAFPERPGSLWAMIADAVAQNGDGEALVCGATRLSWR 59 M+WSQHA I PMR E RFGDRVVP F ERP S+WAM+ +AVA+NGDGEAL+CGA RLSWR Sbjct: 1 MEWSQHAAIRPMRREQRFGDRVVPLFAERPASIWAMVEEAVARNGDGEALICGAQRLSWR 60 Query: 60 EVAEKSAKVAAGFAKLGLTPGDRVAILLGNRIEFVLTMFAAAHAGLVTVLLSTRQQKPEI 119 +VA+++A++A G GL GDR+A+LLGNRIEFVLT+FAAA GL+ VLLSTRQQ PEI Sbjct: 61 DVADQAARIAGGLRAKGLRKGDRLAMLLGNRIEFVLTLFAAAKLGLIAVLLSTRQQTPEI 120 Query: 120 AYVLNDCGATLLVHEAALADRIPDAADIPGLKHRISVSDDGA-SQFAGLADNAPAQAPAQ 178 AYVL+DCGA LL+HEAALADR+P AA++P L R++V +D S FA LAD+ P A Sbjct: 121 AYVLSDCGARLLLHEAALADRLPAAAEMPDLAGRLAVDNDPVRSNFAELADHEPDATEAT 180 Query: 179 VREEDTAMILYTSGTTGRPKGAMLAHCNIVHSSMVFASCLKLTRADRSIAAVPLAHVTGA 238 V EED AMILYTSGTTGRPKGAMLAHCNIVHSSM++ +CL LT +DRSIAAVPL HVTG Sbjct: 181 VAEEDIAMILYTSGTTGRPKGAMLAHCNIVHSSMIYEACLGLTPSDRSIAAVPLGHVTGV 240 Query: 239 VANITTMARCAGALIIMPEFKASEYLKVAARERVTYTVMVPAMYNLCLMQPDFDSYDLSS 298 VAN+T+M RCAG LIIMPEFKA +YLK+AARERVTYTVMVPAMYNLCL+Q DFDS+DLSS Sbjct: 241 VANVTSMVRCAGTLIIMPEFKAGDYLKLAARERVTYTVMVPAMYNLCLLQSDFDSHDLSS 300 Query: 299 WRIGGFGGAPMPVATIEKLDAKIPGLKLANCYGATETTSPSTLMPGELTAAHIDSVGLPC 358 WRIGGFGGAPMPVATIEKL AKIPGL+L N YG+TETTSPSTLMP LTA HIDSVGLPC Sbjct: 301 WRIGGFGGAPMPVATIEKLAAKIPGLRLVNAYGSTETTSPSTLMPPALTARHIDSVGLPC 360 Query: 359 PGAEIVVMGADGRELPRGEIGELWIRSASVIKGYWNNPKATAESFTAGFWHSGDLGSIDV 418 PGA I+VM A GRELPRGEIGE+WI VIKGYW+ P+ATAESFTAG+WHSGDLGSID Sbjct: 361 PGASILVMDAQGRELPRGEIGEIWIGGGQVIKGYWSRPEATAESFTAGYWHSGDLGSIDA 420 Query: 419 KNFVRVFDRQKDMINRGGLKIYSAEVESVLAGHPAVVESAIIAKPCPVLGERVHAVIVTR 478 FVRVFDRQKDMINRGGLKIYSAEVESVLAGHPAV+ESAI+A+PCPVLGERVHAV+VTR Sbjct: 421 DGFVRVFDRQKDMINRGGLKIYSAEVESVLAGHPAVIESAIVARPCPVLGERVHAVVVTR 480 Query: 479 TDVNAENLRAWCAERLSDYKVPETMALTSEPLPRNANGKVIKRQIRESLSS 529 AE+LR WCAERLSDYKVPET+ +T +PLPRNANGKV+KRQ+RE+L++ Sbjct: 481 APAEAEDLRRWCAERLSDYKVPETLIVTPDPLPRNANGKVMKRQLREALTA 531 >ref|YP_001239756.1| putative O-succinylbenzoate--CoA ligase [Bradyrhizobium sp. BTAi1] gb|ABQ35850.1| putative O-succinylbenzoate--CoA ligase [Bradyrhizobium sp. BTAi1] Length = 531 Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/531 (76%), Positives = 453/531 (85%), Gaps = 2/531 (0%) Query: 1 MDWSQHA-IPPMRLEPRFGDRVVPAFPERPGSLWAMIADAVAQNGDGEALVCGATRLSWR 59 M WSQHA I PMR E RFGDRVVP F +RP ++WAM+ AVA+NGDGEALVCGA RLSWR Sbjct: 1 MQWSQHAEIKPMRCEQRFGDRVVPLFTDRPPTIWAMVEAAVARNGDGEALVCGAVRLSWR 60 Query: 60 EVAEKSAKVAAGFAKLGLTPGDRVAILLGNRIEFVLTMFAAAHAGLVTVLLSTRQQKPEI 119 +VA+ +A++A+G GL GDR+A+LLGNRIEFVLT+ AAA GLVTVLLSTRQQ PEI Sbjct: 61 QVADAAARIASGLHAKGLRRGDRLALLLGNRIEFVLTLLAAAKLGLVTVLLSTRQQTPEI 120 Query: 120 AYVLNDCGATLLVHEAALADRIPDAADIPGLKHRISVSDDGA-SQFAGLADNAPAQAPAQ 178 AYVLNDCGA LL+HEAALA R+P P L RI+V DD A S FA L D + Sbjct: 121 AYVLNDCGARLLLHEAALAGRLPAGDVTPELAGRIAVDDDPARSGFAALTDQPVHTDRVE 180 Query: 179 VREEDTAMILYTSGTTGRPKGAMLAHCNIVHSSMVFASCLKLTRADRSIAAVPLAHVTGA 238 + EEDTAMILYTSGTTGRPKGAMLAHCNIVHSSM++ +CL LT ADRSIAAVPL HVTG Sbjct: 181 IAEEDTAMILYTSGTTGRPKGAMLAHCNIVHSSMIYEACLGLTAADRSIAAVPLGHVTGV 240 Query: 239 VANITTMARCAGALIIMPEFKASEYLKVAARERVTYTVMVPAMYNLCLMQPDFDSYDLSS 298 VANIT+M RCAG LIIMPEFKA +YLK+AARERVTYTVMVPAMYNLCL+QPDFDS+DLSS Sbjct: 241 VANITSMVRCAGTLIIMPEFKAGDYLKLAARERVTYTVMVPAMYNLCLLQPDFDSHDLSS 300 Query: 299 WRIGGFGGAPMPVATIEKLDAKIPGLKLANCYGATETTSPSTLMPGELTAAHIDSVGLPC 358 WRIGGFGGAPMPVATIE+L AKIPGL+L N YG+TETTSPSTLMP LTA H+DSVGLPC Sbjct: 301 WRIGGFGGAPMPVATIERLAAKIPGLRLVNAYGSTETTSPSTLMPSVLTARHLDSVGLPC 360 Query: 359 PGAEIVVMGADGRELPRGEIGELWIRSASVIKGYWNNPKATAESFTAGFWHSGDLGSIDV 418 PGA I+VM ADGRELPRGEIGE+WI VIKGYWN P ATAESFTAG+WHSGDLGSID Sbjct: 361 PGASILVMDADGRELPRGEIGEIWIGGGQVIKGYWNRPDATAESFTAGYWHSGDLGSIDA 420 Query: 419 KNFVRVFDRQKDMINRGGLKIYSAEVESVLAGHPAVVESAIIAKPCPVLGERVHAVIVTR 478 NFVRVFDRQKDMINRGGLKIYSAEVESVLA HPAVVESAIIA+PCPVLGERVHAV+VTR Sbjct: 421 DNFVRVFDRQKDMINRGGLKIYSAEVESVLASHPAVVESAIIARPCPVLGERVHAVVVTR 480 Query: 479 TDVNAENLRAWCAERLSDYKVPETMALTSEPLPRNANGKVIKRQIRESLSS 529 ++E LR+WCAERLSDYKVPET+ +T +PLPRNANGKV+KRQ+RE+L++ Sbjct: 481 EPTSSETLRSWCAERLSDYKVPETLIVTPDPLPRNANGKVMKRQLREALTA 531 >ref|ZP_08629063.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08422.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobiaceae bacterium SG-6C] Length = 531 Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/528 (72%), Positives = 457/528 (86%), Gaps = 1/528 (0%) Query: 1 MDWSQHAIPPMRLEPRFGDRVVPAFPERPGSLWAMIADAVAQNGDGEALVCGATRLSWRE 60 MDWSQ+ IP MRLE RFGDR+VPAF +RP ++WAM+A+A A+N DGEAL+CG RL+WRE Sbjct: 1 MDWSQYPIPAMRLETRFGDRIVPAFEQRPSNIWAMVAEAAARNPDGEALICGHERLTWRE 60 Query: 61 VAEKSAKVAAGFAKLGLTPGDRVAILLGNRIEFVLTMFAAAHAGLVTVLLSTRQQKPEIA 120 V +KS +VAAGF ++GL GDR+A+LLGNR EFVLT++ AA+ GLV+V+LSTRQQKPEIA Sbjct: 61 VMQKSMQVAAGFKEIGLKSGDRIALLLGNRNEFVLTLYGAAYLGLVSVMLSTRQQKPEIA 120 Query: 121 YVLNDCGATLLVHEAALADRIPDAADIPGLKHRISVS-DDGASQFAGLADNAPAQAPAQV 179 YVL DCGA LL++E +ADR+PDAA++PGL HR+S+S A F L PA V Sbjct: 121 YVLTDCGAKLLIYENDMADRLPDAAELPGLLHRVSISPTSDALAFLDLVATEAPPPPAGV 180 Query: 180 REEDTAMILYTSGTTGRPKGAMLAHCNIVHSSMVFASCLKLTRADRSIAAVPLAHVTGAV 239 E+DTAMILYTSGTTG+PKGAMLAHCN++HS++V+ +CL+LT+ADRSIAAVPLAHVTG Sbjct: 181 DEQDTAMILYTSGTTGKPKGAMLAHCNLIHSAIVYEACLELTQADRSIAAVPLAHVTGIA 240 Query: 240 ANITTMARCAGALIIMPEFKASEYLKVAARERVTYTVMVPAMYNLCLMQPDFDSYDLSSW 299 ANI MARCAGALII+PEFKA+EYLK+A+RERVT TVMVPAMYNLCL+Q DFDSYDLS+W Sbjct: 241 ANIMAMARCAGALIIVPEFKAAEYLKIASRERVTQTVMVPAMYNLCLLQADFDSYDLSAW 300 Query: 300 RIGGFGGAPMPVATIEKLDAKIPGLKLANCYGATETTSPSTLMPGELTAAHIDSVGLPCP 359 RIGG+GGAPMP ATI++L K+PGLKL N YG+TET+SPST+MP E TA H DSVGLPCP Sbjct: 301 RIGGYGGAPMPTATIQRLAEKLPGLKLVNAYGSTETSSPSTVMPPEFTATHGDSVGLPCP 360 Query: 360 GAEIVVMGADGRELPRGEIGELWIRSASVIKGYWNNPKATAESFTAGFWHSGDLGSIDVK 419 GA I+V+ A GRE+PRGE+GELWI SVIKGYWNNP+AT ESFTAG+WHSGDLGSID + Sbjct: 361 GAHIIVVDAAGREVPRGEVGELWIHGGSVIKGYWNNPRATTESFTAGYWHSGDLGSIDEQ 420 Query: 420 NFVRVFDRQKDMINRGGLKIYSAEVESVLAGHPAVVESAIIAKPCPVLGERVHAVIVTRT 479 NFVRVFDRQKDMINRGGLKIYSAEVESVLA HPAVVESAI+A+PCPVLGERVHAV+V R+ Sbjct: 421 NFVRVFDRQKDMINRGGLKIYSAEVESVLAAHPAVVESAIVARPCPVLGERVHAVVVVRS 480 Query: 480 DVNAENLRAWCAERLSDYKVPETMALTSEPLPRNANGKVIKRQIRESL 527 D+++ LRAWCAER+SDYKVPET+ + +EPLPRNANGKV+K+ +R+SL Sbjct: 481 DIDSPTLRAWCAERMSDYKVPETIDIGTEPLPRNANGKVMKKNLRDSL 528 >ref|YP_522291.1| O-succinylbenzoate--CoA ligase [Rhodoferax ferrireducens T118] gb|ABD68760.1| O-succinylbenzoate--CoA ligase [Rhodoferax ferrireducens T118] Length = 552 Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust. Identities = 280/524 (53%), Positives = 375/524 (71%), Gaps = 4/524 (0%) Query: 7 AIPPMRLEPRFGDRVVPAFPERPGSLWAMIADAVAQNGDGEALVCGATRLSWREVAEKSA 66 A+P ++ E F DR + F +RP S++A+++DAVA+ +GEALV G RL W EV ++ Sbjct: 9 AVPRIQEELHFDDRRIRCFADRPRSVYALLSDAVARFPEGEALVDGDLRLRWHEVQGRAD 68 Query: 67 KVAAGFAKLGLTPGDRVAILLGNRIEFVLTMFAAAHAGLVTVLLSTRQQKPEIAYVLNDC 126 ++A+G A GL PGDR A++LGN FV +FA A G++ V + TR EIAY+L + Sbjct: 69 ELASGLASAGLVPGDRAALVLGNSASFVTIIFALARMGVIAVPIGTRSSASEIAYMLENS 128 Query: 127 GATLLVHEAALADRIPDAADIPGLKHRISVSDD-GASQFAGLADNAPAQAPAQV---REE 182 G + ++ R+PDAA +PG++ R+ +S G +A AP Q EE Sbjct: 129 GCCAVFCDSETVARLPDAALLPGVRLRVCLSQQPGCQALDEIALAGRGAAPVQAYAGSEE 188 Query: 183 DTAMILYTSGTTGRPKGAMLAHCNIVHSSMVFASCLKLTRADRSIAAVPLAHVTGAVANI 242 D A ILYTSGTTGRPKGA+L +VHS+M + +C+ L ADRS+ +VP++HVTG VA + Sbjct: 189 DAAYILYTSGTTGRPKGAILTSLGVVHSTMHYEACMGLGPADRSVISVPMSHVTGLVALV 248 Query: 243 TTMARCAGALIIMPEFKASEYLKVAARERVTYTVMVPAMYNLCLMQPDFDSYDLSSWRIG 302 T RCA LI+M FKA ++L++A RER+T+T+MVPAMYNLCL+QPDF L SWR+G Sbjct: 249 LTAVRCAMTLIVMAVFKAKQFLQLAERERMTHTLMVPAMYNLCLLQPDFSGPALKSWRLG 308 Query: 303 GFGGAPMPVATIEKLDAKIPGLKLANCYGATETTSPSTLMPGELTAAHIDSVGLPCPGAE 362 +GGAPMP ATIE L +K+ GL+L N YGATETTSP+T+ P TA+H D+VG+ P AE Sbjct: 309 AYGGAPMPPATIEALASKLGGLELMNAYGATETTSPATMTPPGSTASHTDTVGISVPCAE 368 Query: 363 IVVMGADGRELPRGEIGELWIRSASVIKGYWNNPKATAESFTAGFWHSGDLGSIDVKNFV 422 I++ DG LP G GE+WIR V+KGYW NP ATAESFT GFWHSGD+G++D FV Sbjct: 369 IIIADFDGTPLPTGTSGEIWIRGPMVVKGYWQNPTATAESFTDGFWHSGDIGTMDDSGFV 428 Query: 423 RVFDRQKDMINRGGLKIYSAEVESVLAGHPAVVESAIIAKPCPVLGERVHAVIVTRTDVN 482 R+ DR KD+INRGG K++S+EVE+VLA HP V+ESA++ +PCPVLGERVHA +V R + Sbjct: 429 RILDRIKDVINRGGYKVFSSEVEAVLASHPQVIESAVVGRPCPVLGERVHAFVVVRDGAS 488 Query: 483 AENLRAWCAERLSDYKVPETMALTSEPLPRNANGKVIKRQIRES 526 A++L+ +CAER+SDYKVPET L+SEPLPRNANGK++KRQ+R++ Sbjct: 489 ADSLKMFCAERMSDYKVPETFTLSSEPLPRNANGKLLKRQMRDA 532