BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0209.0012.p (273 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770688.1| 3-methyl-2-oxobutanoate hydroxymethyltransferas... 534 e-150 ref|YP_576960.1| 3-methyl-2-oxobutanoate hydroxymethyltransferas... 505 e-141 ref|ZP_01047359.1| 3-methyl-2-oxobutanoate hydroxymethyltransfer... 502 e-140 ref|YP_318635.1| 3-methyl-2-oxobutanoate hydroxymethyltransferas... 502 e-140 ref|YP_532149.1| 3-methyl-2-oxobutanoate hydroxymethyltransferas... 490 e-136 >ref|NP_770688.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Bradyrhizobium japonicum USDA 110] sp|Q89MZ4.1|PANB3_BRAJA RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase 3; AltName: Full=Ketopantoate hydroxymethyltransferase 3; Short=KPHMT 3 dbj|BAC49313.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Bradyrhizobium japonicum USDA 110] Length = 273 Score = 534 bits (1375), Expect = e-150, Method: Compositional matrix adjust. Identities = 260/273 (95%), Positives = 265/273 (97%) Query: 1 MSVQSAIKRKTAPDLRARKNGEPIVMLTSYHAHTAALVDRHCDAILVGDSLGNVMHGFET 60 MSVQSAI+RKTAPDLR RKNGEPIVMLTSYHAHTAALVDRHCDAILVGDSLGNVMHGFET Sbjct: 1 MSVQSAIRRKTAPDLRIRKNGEPIVMLTSYHAHTAALVDRHCDAILVGDSLGNVMHGFET 60 Query: 61 TVPVTLDMMILQGRAVMRGSQAALVVVDMPFGSYEGSKEQAFQSAVRIMKETLCGAVKLE 120 TVPVTL+MMILQG AVMRGS ALVVVDMPFGSYEGSKEQAFQSAVRIMKETLCGAVKLE Sbjct: 61 TVPVTLEMMILQGCAVMRGSSQALVVVDMPFGSYEGSKEQAFQSAVRIMKETLCGAVKLE 120 Query: 121 GGARMAETVAFLSERGIPVMGHIGLTPQSINTLGSFRAQGREEETWAPIENDARAIAEAG 180 GGARMAETVAFLSERGIPVMGHIGLTPQSINTLGSFRAQGREE WAPIENDARAIAEAG Sbjct: 121 GGARMAETVAFLSERGIPVMGHIGLTPQSINTLGSFRAQGREEANWAPIENDARAIAEAG 180 Query: 181 AFSIVVEAVAEPLARKITQSIAVPTIGIGASAACDGQVLVLEDMLGLSPRAPKFVRRYGN 240 AFSIV+EAVAEPLARKITQSIAVPTIGIGASAACDGQ+LVLEDMLGLSPR+PKFVRRYGN Sbjct: 181 AFSIVIEAVAEPLARKITQSIAVPTIGIGASAACDGQILVLEDMLGLSPRSPKFVRRYGN 240 Query: 241 LGPMIEEAIAGYARDVKSRAFPGPEHVYGMKKS 273 LGP IEEAIAGYARDVKSRAFPGPEHVY MKKS Sbjct: 241 LGPAIEEAIAGYARDVKSRAFPGPEHVYDMKKS 273 >ref|YP_576960.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Nitrobacter hamburgensis X14] sp|Q1QMP7.1|PANB_NITHX RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase; AltName: Full=Ketopantoate hydroxymethyltransferase; Short=KPHMT gb|ABE62500.1| ketopantoate hydroxymethyltransferase [Nitrobacter hamburgensis X14] Length = 275 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 239/271 (88%), Positives = 257/271 (94%) Query: 1 MSVQSAIKRKTAPDLRARKNGEPIVMLTSYHAHTAALVDRHCDAILVGDSLGNVMHGFET 60 MSVQSAI+R+TAPD+RARKNG+PIVMLTSYHAHTAALVDRHCD ILVGDSLGNVMHGFET Sbjct: 1 MSVQSAIRRRTAPDIRARKNGDPIVMLTSYHAHTAALVDRHCDVILVGDSLGNVMHGFET 60 Query: 61 TVPVTLDMMILQGRAVMRGSQAALVVVDMPFGSYEGSKEQAFQSAVRIMKETLCGAVKLE 120 TVPVTLDMMILQGRAVMRGSQ ALVVVDMPFGSYE SKEQAF SA RI+KETLCGAVKLE Sbjct: 61 TVPVTLDMMILQGRAVMRGSQQALVVVDMPFGSYEASKEQAFHSAARILKETLCGAVKLE 120 Query: 121 GGARMAETVAFLSERGIPVMGHIGLTPQSINTLGSFRAQGREEETWAPIENDARAIAEAG 180 GG +MAET+AFL+ RG+PVMGH+GLTPQSINTLGSFRAQGREE TW PIE+DARA+AEAG Sbjct: 121 GGVKMAETIAFLTARGVPVMGHVGLTPQSINTLGSFRAQGREEGTWRPIEDDARAVAEAG 180 Query: 181 AFSIVVEAVAEPLARKITQSIAVPTIGIGASAACDGQVLVLEDMLGLSPRAPKFVRRYGN 240 AFS+V+EAVAEPLARKIT+S+A+PTIGIGAS ACDGQVLVLEDMLGLSPRAPKFVRRYG Sbjct: 181 AFSMVIEAVAEPLARKITESVAIPTIGIGASPACDGQVLVLEDMLGLSPRAPKFVRRYGE 240 Query: 241 LGPMIEEAIAGYARDVKSRAFPGPEHVYGMK 271 LGPMIE AI GYARDV+SRAFPGPEHVY MK Sbjct: 241 LGPMIEAAIEGYARDVRSRAFPGPEHVYAMK 271 >ref|ZP_01047359.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Nitrobacter sp. Nb-311A] gb|EAQ34630.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Nitrobacter sp. Nb-311A] Length = 274 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 236/272 (86%), Positives = 259/272 (95%) Query: 1 MSVQSAIKRKTAPDLRARKNGEPIVMLTSYHAHTAALVDRHCDAILVGDSLGNVMHGFET 60 MS+QSAI+R+TAPD+RARKNG+PIVMLTSYHAHTAALVDRHCD ILVGDSLGNVMHGFET Sbjct: 1 MSIQSAIRRRTAPDIRARKNGDPIVMLTSYHAHTAALVDRHCDVILVGDSLGNVMHGFET 60 Query: 61 TVPVTLDMMILQGRAVMRGSQAALVVVDMPFGSYEGSKEQAFQSAVRIMKETLCGAVKLE 120 TVPVTL+MMILQGRAVMRGSQ ALVVVDMPFGSYE SKEQAF SA R++KETLCGAVKLE Sbjct: 61 TVPVTLEMMILQGRAVMRGSQHALVVVDMPFGSYEASKEQAFHSAARLLKETLCGAVKLE 120 Query: 121 GGARMAETVAFLSERGIPVMGHIGLTPQSINTLGSFRAQGREEETWAPIENDARAIAEAG 180 GG +MAET+AFLSERGIPVMGH+GLTPQSINTLGSFRAQGREE TW PIE+DARA+AEAG Sbjct: 121 GGVKMAETIAFLSERGIPVMGHVGLTPQSINTLGSFRAQGREEGTWQPIEDDARAVAEAG 180 Query: 181 AFSIVVEAVAEPLARKITQSIAVPTIGIGASAACDGQVLVLEDMLGLSPRAPKFVRRYGN 240 AFS+V+EAVAEPLAR+IT+++A+PTIGIGAS ACDGQVLVLEDMLGLSPRAPKFVRRYG Sbjct: 181 AFSMVIEAVAEPLARRITETVAIPTIGIGASPACDGQVLVLEDMLGLSPRAPKFVRRYGE 240 Query: 241 LGPMIEEAIAGYARDVKSRAFPGPEHVYGMKK 272 LGPMIE AI GYARDV+SRAFPGPE+VY MK+ Sbjct: 241 LGPMIEAAIEGYARDVRSRAFPGPEYVYAMKQ 272 >ref|YP_318635.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Nitrobacter winogradskyi Nb-255] sp|Q3SR08.1|PANB_NITWN RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase; AltName: Full=Ketopantoate hydroxymethyltransferase; Short=KPHMT gb|ABA05283.1| ketopantoate hydroxymethyltransferase [Nitrobacter winogradskyi Nb-255] Length = 274 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 237/271 (87%), Positives = 257/271 (94%) Query: 1 MSVQSAIKRKTAPDLRARKNGEPIVMLTSYHAHTAALVDRHCDAILVGDSLGNVMHGFET 60 MSVQSAI+R+TAPD+RARKNG+PIVMLTSYHAHTAALVDR+CD ILVGDSLGNVMHGFET Sbjct: 1 MSVQSAIRRRTAPDIRARKNGDPIVMLTSYHAHTAALVDRYCDVILVGDSLGNVMHGFET 60 Query: 61 TVPVTLDMMILQGRAVMRGSQAALVVVDMPFGSYEGSKEQAFQSAVRIMKETLCGAVKLE 120 TVPVTLDMMILQGRAVMRGSQ ALVVVDMPFGSYE SKEQAF SA R++KETLCGAVKLE Sbjct: 61 TVPVTLDMMILQGRAVMRGSQQALVVVDMPFGSYEASKEQAFHSAARLLKETLCGAVKLE 120 Query: 121 GGARMAETVAFLSERGIPVMGHIGLTPQSINTLGSFRAQGREEETWAPIENDARAIAEAG 180 GG +MAET+AFLS RGIPVMGH+GLTPQSINTLGSFRAQGREE TW PIE+DARA+AEAG Sbjct: 121 GGVKMAETIAFLSARGIPVMGHVGLTPQSINTLGSFRAQGREEGTWQPIEDDARAVAEAG 180 Query: 181 AFSIVVEAVAEPLARKITQSIAVPTIGIGASAACDGQVLVLEDMLGLSPRAPKFVRRYGN 240 AFS+V+EAVAEPLAR+IT+++A+PTIGIGAS ACDGQVLVLEDMLGLSPRAPKFVRRYG Sbjct: 181 AFSMVIEAVAEPLARRITETVAIPTIGIGASPACDGQVLVLEDMLGLSPRAPKFVRRYGE 240 Query: 241 LGPMIEEAIAGYARDVKSRAFPGPEHVYGMK 271 LGPMIE AI GYARDV+SRAFPGPEHVY MK Sbjct: 241 LGPMIEAAIEGYARDVRSRAFPGPEHVYAMK 271 >ref|YP_532149.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Rhodopseudomonas palustris BisB18] sp|Q215V6.1|PANB_RHOPB RecName: Full=3-methyl-2-oxobutanoate hydroxymethyltransferase; AltName: Full=Ketopantoate hydroxymethyltransferase; Short=KPHMT gb|ABD87830.1| 3-methyl-2-oxobutanoate hydroxymethyltransferase [Rhodopseudomonas palustris BisB18] Length = 274 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 234/271 (86%), Positives = 253/271 (93%) Query: 1 MSVQSAIKRKTAPDLRARKNGEPIVMLTSYHAHTAALVDRHCDAILVGDSLGNVMHGFET 60 MSVQSAIKRKTAP++RARK G+P+VMLTSYHAHTAALVDR+CD ILVGDSLGNVMHGFET Sbjct: 1 MSVQSAIKRKTAPEIRARKGGDPVVMLTSYHAHTAALVDRYCDVILVGDSLGNVMHGFET 60 Query: 61 TVPVTLDMMILQGRAVMRGSQAALVVVDMPFGSYEGSKEQAFQSAVRIMKETLCGAVKLE 120 TVPVTLDMMILQGRAVMRGS+ ALVVVDMPFGSYE SKEQAF SAVRIMKE+LCGAVKLE Sbjct: 61 TVPVTLDMMILQGRAVMRGSKEALVVVDMPFGSYEASKEQAFHSAVRIMKESLCGAVKLE 120 Query: 121 GGARMAETVAFLSERGIPVMGHIGLTPQSINTLGSFRAQGREEETWAPIENDARAIAEAG 180 GG +MAET+ FLSERG+PVMGHIGLTPQSINTLGSFRAQGREE WAPIE DARA+AEAG Sbjct: 121 GGVKMAETIRFLSERGVPVMGHIGLTPQSINTLGSFRAQGREESNWAPIEADARAVAEAG 180 Query: 181 AFSIVVEAVAEPLARKITQSIAVPTIGIGASAACDGQVLVLEDMLGLSPRAPKFVRRYGN 240 AFS+V+EAVAEPLARKIT IA+PTIGIGASAACDGQVLVLEDMLGLSP APKFV+R+G+ Sbjct: 181 AFSVVIEAVAEPLARKITADIAIPTIGIGASAACDGQVLVLEDMLGLSPWAPKFVKRFGD 240 Query: 241 LGPMIEEAIAGYARDVKSRAFPGPEHVYGMK 271 LGP IE AI YA +V+SRAFPGPEHVYGMK Sbjct: 241 LGPGIEAAIKDYADEVRSRAFPGPEHVYGMK 271