BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0209.0010.p (203 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001205738.1| putative signal peptide [Bradyrhizobium sp. ... 290 1e-76 ref|YP_001239753.1| hypothetical protein BBta_3769 [Bradyrhizobi... 285 3e-75 ref|NP_770686.1| hypothetical protein blr4046 [Bradyrhizobium ja... 275 2e-72 ref|YP_532147.1| hypothetical protein RPC_2274 [Rhodopseudomonas... 263 1e-68 ref|YP_569730.1| hypothetical protein RPD_2600 [Rhodopseudomonas... 97 2e-18 >ref|YP_001205738.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL77512.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 198 Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 140/202 (69%), Positives = 160/202 (79%), Gaps = 5/202 (2%) Query: 1 MLRRVAICLAFAVLALGLAGAASARQRHQTNPVPFAHTPCSVLDSGPCIPSYCSVFNHGP 60 MLR V + L L L A AR+R Q NPVPFAHTPCSV D PC PS+CSV+ P Sbjct: 1 MLRVVVLIL----LMLAAPATADARRR-QINPVPFAHTPCSVFDEQPCTPSFCSVYGPWP 55 Query: 61 CLPEIDYPYGENLQLTILTVPPQDQAEKYRKPDHDLDTIGDLFAALRACWAPPPPDDARE 120 C PE++YPYGENLQLTI + P +DQ KY+KPDHDLDTIGDLFAALR+CW PPP DDAR Sbjct: 56 CFPEMNYPYGENLQLTIESRPAKDQQAKYQKPDHDLDTIGDLFAALRSCWTPPPEDDARA 115 Query: 121 GMQMSVRFSFKRTGEMIGTPRLTFSTRGIPADTRTTYLNAINASLDACLPLKFTGGLGGA 180 GMQM+VRFSFKRTGEM+ PRLTF+T G+ ADTR TYL AI+ SLDACLPLKFT GLGGA Sbjct: 116 GMQMTVRFSFKRTGEMVAPPRLTFATSGVSADTRATYLKAISTSLDACLPLKFTSGLGGA 175 Query: 181 LAGRPIMIRYVDNRELAKSADK 202 LAGRPI IRYVDNR+L+K++ + Sbjct: 176 LAGRPIAIRYVDNRDLSKTSQQ 197 >ref|YP_001239753.1| hypothetical protein BBta_3769 [Bradyrhizobium sp. BTAi1] gb|ABQ35847.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 198 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 137/202 (67%), Positives = 160/202 (79%), Gaps = 5/202 (2%) Query: 1 MLRRVAICLAFAVLALGLAGAASARQRHQTNPVPFAHTPCSVLDSGPCIPSYCSVFNHGP 60 MLR V + L L L A AR+R Q NPVPFAHTPCSVLD PC PS+CS++ P Sbjct: 1 MLRAVLLIL----LMLATPATADARRR-QINPVPFAHTPCSVLDEQPCTPSFCSIYGPWP 55 Query: 61 CLPEIDYPYGENLQLTILTVPPQDQAEKYRKPDHDLDTIGDLFAALRACWAPPPPDDARE 120 C+PE++YPYG+NLQLTI + P +DQA KY+KPDHDLDTI DLFAALR+CW PP D AR Sbjct: 56 CIPEMNYPYGQNLQLTIESRPAKDQAAKYQKPDHDLDTISDLFAALRSCWTPPSEDSARA 115 Query: 121 GMQMSVRFSFKRTGEMIGTPRLTFSTRGIPADTRTTYLNAINASLDACLPLKFTGGLGGA 180 GMQM+VRFSFKRTGEM+ PR+TF+T G AD R TYL AINASLDACLPLKFT GLGGA Sbjct: 116 GMQMTVRFSFKRTGEMVAPPRVTFATSGASADIRATYLKAINASLDACLPLKFTSGLGGA 175 Query: 181 LAGRPIMIRYVDNRELAKSADK 202 LAGRPI IRYVDNR+L+K++++ Sbjct: 176 LAGRPIAIRYVDNRDLSKTSEQ 197 >ref|NP_770686.1| hypothetical protein blr4046 [Bradyrhizobium japonicum USDA 110] dbj|BAC49311.1| blr4046 [Bradyrhizobium japonicum USDA 110] Length = 206 Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 130/181 (71%), Positives = 149/181 (82%), Gaps = 1/181 (0%) Query: 18 LAGAASARQRHQTNPVPFAHTPCSVLDSGPCIPSYCSVFNHGPCLPEIDYPYGENLQLTI 77 ++ A+ QR Q NP+PFAH PCSVLD+ PC PSYCS GPC+PEIDYPYG+NLQLTI Sbjct: 27 ISTVAADAQRRQINPIPFAHEPCSVLDNRPCTPSYCSPLEPGPCIPEIDYPYGQNLQLTI 86 Query: 78 LTVPPQDQAEKYRKPDHDLDTIGDLFAALRACWAPPPPDDAREGMQMSVRFSFKRTGEMI 137 ++VP + KYRKPDHDLDTIGDLFA LR CW+ PP D+AR GMQMSVRFSF + G +I Sbjct: 87 VSVPSESDRAKYRKPDHDLDTIGDLFAELRTCWS-PPADNARAGMQMSVRFSFNKAGGLI 145 Query: 138 GTPRLTFSTRGIPADTRTTYLNAINASLDACLPLKFTGGLGGALAGRPIMIRYVDNRELA 197 G PRLT++T G+PADTRTTYLNAI+ASL ACLPLKFT GLGGALAGRPI IRYVDNR+L Sbjct: 146 GPPRLTYATAGVPADTRTTYLNAIDASLKACLPLKFTSGLGGALAGRPIAIRYVDNRQLG 205 Query: 198 K 198 K Sbjct: 206 K 206 >ref|YP_532147.1| hypothetical protein RPC_2274 [Rhodopseudomonas palustris BisB18] gb|ABD87828.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 203 Score = 263 bits (671), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 130/198 (65%), Positives = 152/198 (76%) Query: 1 MLRRVAICLAFAVLALGLAGAASARQRHQTNPVPFAHTPCSVLDSGPCIPSYCSVFNHGP 60 M+RR I A AGA AR RH+ + PFAH+PCSVLD PC PSYC+VFNHGP Sbjct: 1 MMRRWFIVAVLMAAAGLGAGAGEARARHRIDAAPFAHSPCSVLDGQPCTPSYCNVFNHGP 60 Query: 61 CLPEIDYPYGENLQLTILTVPPQDQAEKYRKPDHDLDTIGDLFAALRACWAPPPPDDARE 120 C+PEIDYP GENLQLTIL+VP A +Y+KPDHDL+TIGDLFAALRACW+PP AR Sbjct: 61 CVPEIDYPLGENLQLTILSVPAAGDAVRYQKPDHDLNTIGDLFAALRACWSPPDLAAARA 120 Query: 121 GMQMSVRFSFKRTGEMIGTPRLTFSTRGIPADTRTTYLNAINASLDACLPLKFTGGLGGA 180 GMQMSV FSF+++GEMI PRLTF+TR P++ R+ YL+AIN SL CLPL+FT LGGA Sbjct: 121 GMQMSVLFSFRKSGEMIAPPRLTFATRDAPSEVRSAYLDAINGSLGHCLPLRFTAALGGA 180 Query: 181 LAGRPIMIRYVDNRELAK 198 +AGRPIMIRYVDNR L + Sbjct: 181 IAGRPIMIRYVDNRTLQQ 198 >ref|YP_569730.1| hypothetical protein RPD_2600 [Rhodopseudomonas palustris BisB5] gb|ABE39829.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 147 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 46/107 (42%), Positives = 63/107 (58%) Query: 96 LDTIGDLFAALRACWAPPPPDDAREGMQMSVRFSFKRTGEMIGTPRLTFSTRGIPADTRT 155 +D + +LFAAL+ CW PP GMQ++V SFKR GE++G PR+TF + P Sbjct: 32 IDNLNELFAALKQCWRPPQLTPGDPGMQITVLVSFKRDGEILGKPRITFESANTPGADSL 91 Query: 156 TYLNAINASLDACLPLKFTGGLGGALAGRPIMIRYVDNRELAKSADK 202 Y A+ +L C PL FT +G A+AGRP +R+ D R L K +K Sbjct: 92 VYRIAVMETLQRCTPLPFTQSMGNAVAGRPFTLRFDDRRTLPKPNEK 138