BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0209.0002.p (247 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001991506.1| ABC transporter [Rhodopseudomonas palustris ... 437 e-121 ref|NP_947621.1| branched chain amino acid ABC transporter ATP-b... 436 e-120 ref|YP_001239740.1| putative branched-chain amino acid transport... 431 e-119 ref|NP_770678.1| ABC transporter ATP-binding protein [Bradyrhizo... 431 e-119 ref|YP_001205728.1| putative branched-chain amino acid transport... 430 e-119 >ref|YP_001991506.1| ABC transporter [Rhodopseudomonas palustris TIE-1] gb|ACF01031.1| ABC transporter related [Rhodopseudomonas palustris TIE-1] Length = 248 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 210/248 (84%), Positives = 230/248 (92%), Gaps = 1/248 (0%) Query: 1 MAEAKLAEKPVA-AAGADVLTVKDLQAWYGESHILHGINFNVKAGEVVTLLGRNGAGKTT 59 M EA ++PV+ AAGA +L+V+DLQAWYGESHILHG+NF+V+ GEVVTLLGRNGAGKTT Sbjct: 1 MVEATTLDRPVSSAAGAPLLSVRDLQAWYGESHILHGMNFDVREGEVVTLLGRNGAGKTT 60 Query: 60 TLKSVMGVIGKRSGSIRFDNQEIIRATSDKIARLGIAFCPEERGIFASLDVRENLLLPPV 119 TLKSVMG++GKRSGS+ FD +I RA+SDKIAR GIAFCPEERGIFASLDVRENL+LPP Sbjct: 61 TLKSVMGIVGKRSGSVTFDGTDISRASSDKIARRGIAFCPEERGIFASLDVRENLMLPPQ 120 Query: 120 VRPGGLPLDQIFTLFPNLKERLTSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLA 179 VRPGGL LDQIF LFPNL+ERL SQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLA Sbjct: 121 VRPGGLSLDQIFELFPNLRERLKSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLA 180 Query: 180 PVIIQQIGHTIARLKSQGFTILLVEQNFRFASTVADRYYIVEHGKVIDGFANSELSANMD 239 PVIIQQIGHTIARLK +GFTILLVEQNFRFA+TVADRYY+VEHGK+IDGFANSEL ANMD Sbjct: 181 PVIIQQIGHTIARLKKEGFTILLVEQNFRFAATVADRYYVVEHGKIIDGFANSELEANMD 240 Query: 240 KLHTYLGV 247 KLHTYLGV Sbjct: 241 KLHTYLGV 248 >ref|NP_947621.1| branched chain amino acid ABC transporter ATP-binding protein [Rhodopseudomonas palustris CGA009] emb|CAE27717.1| putative branched-chain amino acid transport system ATP-binding protein [Rhodopseudomonas palustris CGA009] Length = 248 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 209/248 (84%), Positives = 230/248 (92%), Gaps = 1/248 (0%) Query: 1 MAEAKLAEKPVA-AAGADVLTVKDLQAWYGESHILHGINFNVKAGEVVTLLGRNGAGKTT 59 M EA ++PV+ AAGA +L+V+DLQAWYGESHILHG+NF+V+ GEVVTLLGRNGAGKTT Sbjct: 1 MVEATTLDRPVSSAAGAPLLSVRDLQAWYGESHILHGMNFDVREGEVVTLLGRNGAGKTT 60 Query: 60 TLKSVMGVIGKRSGSIRFDNQEIIRATSDKIARLGIAFCPEERGIFASLDVRENLLLPPV 119 TLKSVMG++GKRSGS+ FD +I RA+SDKIAR GIAFCPEERGIFASLDVRENL+LPP Sbjct: 61 TLKSVMGIVGKRSGSVTFDGTDISRASSDKIARRGIAFCPEERGIFASLDVRENLMLPPQ 120 Query: 120 VRPGGLPLDQIFTLFPNLKERLTSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLA 179 VRPGGL LDQIF LFPNL+ERL SQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLA Sbjct: 121 VRPGGLSLDQIFELFPNLRERLKSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLA 180 Query: 180 PVIIQQIGHTIARLKSQGFTILLVEQNFRFASTVADRYYIVEHGKVIDGFANSELSANMD 239 PVIIQQIGHTIARLK +GFTILLVEQNFRFA+TVADRYY+VEHGK+IDGFANSE+ ANMD Sbjct: 181 PVIIQQIGHTIARLKKEGFTILLVEQNFRFAATVADRYYVVEHGKIIDGFANSEIEANMD 240 Query: 240 KLHTYLGV 247 KLHTYLGV Sbjct: 241 KLHTYLGV 248 >ref|YP_001239740.1| putative branched-chain amino acid transport system ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ35834.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family [Bradyrhizobium sp. BTAi1] Length = 248 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 208/248 (83%), Positives = 228/248 (91%), Gaps = 1/248 (0%) Query: 1 MAEAKLAEKP-VAAAGADVLTVKDLQAWYGESHILHGINFNVKAGEVVTLLGRNGAGKTT 59 M E A KP AAA + +L VK+L++WYGESHILHG+NF V AGEVVTLLGRNGAGKTT Sbjct: 1 MPEVMTAAKPGQAAATSTILDVKNLESWYGESHILHGMNFTVNAGEVVTLLGRNGAGKTT 60 Query: 60 TLKSVMGVIGKRSGSIRFDNQEIIRATSDKIARLGIAFCPEERGIFASLDVRENLLLPPV 119 TLKS+MG+IGKR+GS++F+ Q++IR TSD+IARLGIA CPEERGIFASLDVRENLLLPPV Sbjct: 61 TLKSIMGIIGKRTGSVQFNGQQLIRMTSDRIARLGIALCPEERGIFASLDVRENLLLPPV 120 Query: 120 VRPGGLPLDQIFTLFPNLKERLTSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLA 179 VRPGGL LDQIF LFPNLKERL SQGTKLSGGEQQMLAIARILRTGA FLMLDEPTEGLA Sbjct: 121 VRPGGLTLDQIFELFPNLKERLKSQGTKLSGGEQQMLAIARILRTGASFLMLDEPTEGLA 180 Query: 180 PVIIQQIGHTIARLKSQGFTILLVEQNFRFASTVADRYYIVEHGKVIDGFANSELSANMD 239 PVIIQQIGHTIARLK +GFTILLVEQNFRFASTVADRYY+VEHGKVIDGFAN++L+ANMD Sbjct: 181 PVIIQQIGHTIARLKKEGFTILLVEQNFRFASTVADRYYVVEHGKVIDGFANADLAANMD 240 Query: 240 KLHTYLGV 247 KLHTYLGV Sbjct: 241 KLHTYLGV 248 >ref|NP_770678.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49303.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 248 Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust. Identities = 202/234 (86%), Positives = 224/234 (95%) Query: 14 AGADVLTVKDLQAWYGESHILHGINFNVKAGEVVTLLGRNGAGKTTTLKSVMGVIGKRSG 73 +G ++L V++L+AWYGESHILHGINF+V AGEVVTLLGRNGAGKTTTLKS+MG+IGKR+G Sbjct: 15 SGGNILQVRNLEAWYGESHILHGINFDVNAGEVVTLLGRNGAGKTTTLKSIMGIIGKRTG 74 Query: 74 SIRFDNQEIIRATSDKIARLGIAFCPEERGIFASLDVRENLLLPPVVRPGGLPLDQIFTL 133 S++F+ QEIIR TSDKIAR+GIAFCPEERGIF+SLDVRENLLLPPVVR GGLPL+QIF L Sbjct: 75 SVKFNTQEIIRTTSDKIARMGIAFCPEERGIFSSLDVRENLLLPPVVREGGLPLEQIFDL 134 Query: 134 FPNLKERLTSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLAPVIIQQIGHTIARL 193 FPNLKERL SQGTKLSGGEQQMLAIARILRTGA FLMLDEPTEGLAPVIIQQIGHTIARL Sbjct: 135 FPNLKERLNSQGTKLSGGEQQMLAIARILRTGASFLMLDEPTEGLAPVIIQQIGHTIARL 194 Query: 194 KSQGFTILLVEQNFRFASTVADRYYIVEHGKVIDGFANSELSANMDKLHTYLGV 247 K +GFTILLVEQNFRFASTVADRYY+VEHGK+IDGF+N+EL+ANMDKLHTYLGV Sbjct: 195 KKEGFTILLVEQNFRFASTVADRYYVVEHGKIIDGFSNAELAANMDKLHTYLGV 248 >ref|YP_001205728.1| putative branched-chain amino acid transport system ATP-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL77502.1| putative branched-chain amino acid transport system ATP-binding protein [Bradyrhizobium sp. ORS 278] Length = 248 Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust. Identities = 208/247 (84%), Positives = 226/247 (91%), Gaps = 3/247 (1%) Query: 1 MAEAKLAEKPVAAAGADVLTVKDLQAWYGESHILHGINFNVKAGEVVTLLGRNGAGKTTT 60 M AKL + AA +L VK+L++WYGESHILHG+NFNV AGEVVTLLGRNGAGKTTT Sbjct: 5 MTAAKLGQ---PAATNTILDVKNLESWYGESHILHGMNFNVNAGEVVTLLGRNGAGKTTT 61 Query: 61 LKSVMGVIGKRSGSIRFDNQEIIRATSDKIARLGIAFCPEERGIFASLDVRENLLLPPVV 120 LKS+MG+IGKR+GS+ F+ Q++IR TSD+IARLGIA CPEERGIFASLDVRENLLLPPVV Sbjct: 62 LKSIMGIIGKRTGSVAFNGQQLIRMTSDRIARLGIALCPEERGIFASLDVRENLLLPPVV 121 Query: 121 RPGGLPLDQIFTLFPNLKERLTSQGTKLSGGEQQMLAIARILRTGARFLMLDEPTEGLAP 180 RPGGL LDQIF LFPNLKERL SQGTKLSGGEQQMLAIARILRTGA FLMLDEPTEGLAP Sbjct: 122 RPGGLSLDQIFELFPNLKERLKSQGTKLSGGEQQMLAIARILRTGASFLMLDEPTEGLAP 181 Query: 181 VIIQQIGHTIARLKSQGFTILLVEQNFRFASTVADRYYIVEHGKVIDGFANSELSANMDK 240 VIIQQIGHTIARLK +GFTILLVEQNFRFASTVADRYY+VEHGKVIDGFAN++LSANMDK Sbjct: 182 VIIQQIGHTIARLKKEGFTILLVEQNFRFASTVADRYYVVEHGKVIDGFANADLSANMDK 241 Query: 241 LHTYLGV 247 LHTYLGV Sbjct: 242 LHTYLGV 248