BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0208.0008.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08627365.1| putative membrane protein [Bradyrhizobiaceae ... 380 e-103 ref|YP_488113.1| hypothetical protein RPB_4519 [Rhodopseudomonas... 370 e-100 ref|YP_779640.1| hypothetical protein RPE_0703 [Rhodopseudomonas... 362 4e-98 ref|YP_571479.1| hypothetical protein RPD_4361 [Rhodopseudomonas... 354 7e-96 ref|NP_946254.1| hypothetical protein RPA0901 [Rhodopseudomonas ... 353 2e-95 >ref|ZP_08627365.1| putative membrane protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09991.1| putative membrane protein [Bradyrhizobiaceae bacterium SG-6C] Length = 254 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 188/242 (77%), Positives = 214/242 (88%) Query: 20 IAFAFLLAGFVKGTLGLGLPTVAMGLLATTMAPGQAIAIVIVPAIVTNIWQTFVGPYLRD 79 IA FLLAGFVKGT+G+GLPTVAMGLLAT M P A+AIVIVPAIVTNIWQTFVGPYLRD Sbjct: 13 IAAVFLLAGFVKGTIGMGLPTVAMGLLATRMPPAHALAIVIVPAIVTNIWQTFVGPYLRD 72 Query: 80 IIKRLWPLMLGTVAGIWINAGLLTGPYAAYGTVVLGVLLVIYAIVGLSRLSFKVARRDEK 139 I++RLWPLM+ T+ GIW AGL+TGPYA YGTVVLGVLLVIYAI+GLSR+ F VA +DEK Sbjct: 73 IVRRLWPLMIATMIGIWSGAGLMTGPYARYGTVVLGVLLVIYAIIGLSRVRFSVAHKDEK 132 Query: 140 WIGGIVGIITGLISAATGVQVIPSMPFMQAIGMEKDELVQALGVFFTTATVALAFNLTAS 199 WIGGIVG+ITG+ISAATGVQVIPSMPFMQAIGMEKDELVQALGVFFTTAT+ALAFNLT + Sbjct: 133 WIGGIVGLITGVISAATGVQVIPSMPFMQAIGMEKDELVQALGVFFTTATIALAFNLTGA 192 Query: 200 GLLTATTALPGAVAMAASFIGMFIGQAVRTRMQPEVFRRWFLISMILLGIYLAGSALLKI 259 GLL AT A+PG +AM +F GM++GQ +R+RM + FRRWFLI+++LLGIYLAG L KI Sbjct: 193 GLLNATVAIPGLIAMVTAFAGMYLGQLLRSRMDADTFRRWFLIALLLLGIYLAGEMLAKI 252 Query: 260 HG 261 HG Sbjct: 253 HG 254 >ref|YP_488113.1| hypothetical protein RPB_4519 [Rhodopseudomonas palustris HaA2] gb|ABD09202.1| Protein of unknown function DUF81 [Rhodopseudomonas palustris HaA2] Length = 261 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 187/261 (71%), Positives = 218/261 (83%) Query: 1 VPFASIGQCAAMVDHLLIFIAFAFLLAGFVKGTLGLGLPTVAMGLLATTMAPGQAIAIVI 60 +P + QC AM D LL+ IA F AGFVKG +GLGLPTV++GLLA M P QAIAIVI Sbjct: 1 MPGYPLRQCTAMPDPLLLLIAAVFAFAGFVKGVIGLGLPTVSIGLLAVIMPPAQAIAIVI 60 Query: 61 VPAIVTNIWQTFVGPYLRDIIKRLWPLMLGTVAGIWINAGLLTGPYAAYGTVVLGVLLVI 120 VPAIVTNIWQTF GPYLRDII+RLWPLMLGTV GI + +GL+TGPYA YGT+VLG LLVI Sbjct: 61 VPAIVTNIWQTFAGPYLRDIIRRLWPLMLGTVIGIRLGSGLMTGPYARYGTLVLGGLLVI 120 Query: 121 YAIVGLSRLSFKVARRDEKWIGGIVGIITGLISAATGVQVIPSMPFMQAIGMEKDELVQA 180 Y ++GLS++ F V+R EKW+GG VG++TG++SAATGVQVIPSMPFMQAIGMEKDELVQA Sbjct: 121 YGLLGLSKMRFHVSRAHEKWVGGPVGLVTGVVSAATGVQVIPSMPFMQAIGMEKDELVQA 180 Query: 181 LGVFFTTATVALAFNLTASGLLTATTALPGAVAMAASFIGMFIGQAVRTRMQPEVFRRWF 240 LGVFFTTAT+ALAFNLT +GLL+ TALPG VA+ A+F GMF GQAVRTRM P+VFRRWF Sbjct: 181 LGVFFTTATLALAFNLTDAGLLSVATALPGGVALVAAFAGMFAGQAVRTRMHPDVFRRWF 240 Query: 241 LISMILLGIYLAGSALLKIHG 261 LIS+I LG YL+ L+K+ G Sbjct: 241 LISIIGLGCYLSAETLVKMFG 261 >ref|YP_779640.1| hypothetical protein RPE_0703 [Rhodopseudomonas palustris BisA53] gb|ABJ04660.1| protein of unknown function DUF81 [Rhodopseudomonas palustris BisA53] Length = 249 Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 183/245 (74%), Positives = 210/245 (85%) Query: 12 MVDHLLIFIAFAFLLAGFVKGTLGLGLPTVAMGLLATTMAPGQAIAIVIVPAIVTNIWQT 71 M D LI IA F LAGFVKG +GLGLPTV++GLLA M P QA+AIVIVPAIVTNIWQT Sbjct: 1 MFDPFLILIAAVFALAGFVKGVIGLGLPTVSIGLLAVAMPPAQALAIVIVPAIVTNIWQT 60 Query: 72 FVGPYLRDIIKRLWPLMLGTVAGIWINAGLLTGPYAAYGTVVLGVLLVIYAIVGLSRLSF 131 FVGPYLRDII+RLWPLMLGT GI AGL+TGPYA YGTVVLG LLVIYA++GL + F Sbjct: 61 FVGPYLRDIIRRLWPLMLGTAIGIRAGAGLMTGPYAGYGTVVLGALLVIYALLGLRQTRF 120 Query: 132 KVARRDEKWIGGIVGIITGLISAATGVQVIPSMPFMQAIGMEKDELVQALGVFFTTATVA 191 +AR EKW+GG+VG+ITG++SAATGVQVIPSMPFMQAIGMEKDELVQALGVFFTTAT+ Sbjct: 121 HLARVHEKWVGGLVGLITGVVSAATGVQVIPSMPFMQAIGMEKDELVQALGVFFTTATLV 180 Query: 192 LAFNLTASGLLTATTALPGAVAMAASFIGMFIGQAVRTRMQPEVFRRWFLISMILLGIYL 251 LAFNLT +GLL+ TA PGAVA+ A+F GMF+GQAVR++M PE FRRWFL++M+LLG+YL Sbjct: 181 LAFNLTDAGLLSVATAWPGAVALVAAFAGMFVGQAVRSKMHPEQFRRWFLVAMLLLGLYL 240 Query: 252 AGSAL 256 A SAL Sbjct: 241 AVSAL 245 >ref|YP_571479.1| hypothetical protein RPD_4361 [Rhodopseudomonas palustris BisB5] gb|ABE41578.1| protein of unknown function DUF81 [Rhodopseudomonas palustris BisB5] Length = 261 Score = 354 bits (908), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 181/257 (70%), Positives = 210/257 (81%) Query: 5 SIGQCAAMVDHLLIFIAFAFLLAGFVKGTLGLGLPTVAMGLLATTMAPGQAIAIVIVPAI 64 +IGQ A + D LL+ I F AGF+KG +GLGLPTV++GLLA M P +A+AIVIVPAI Sbjct: 5 AIGQFAPVSDPLLLLITAVFAFAGFIKGVIGLGLPTVSIGLLALVMPPAEAVAIVIVPAI 64 Query: 65 VTNIWQTFVGPYLRDIIKRLWPLMLGTVAGIWINAGLLTGPYAAYGTVVLGVLLVIYAIV 124 VTNIWQTF GPYLRDII+RLWPLMLGTV GI + +GL+TGPYA T+VLGVLLVIY I+ Sbjct: 65 VTNIWQTFAGPYLRDIIRRLWPLMLGTVIGIRLGSGLMTGPYARDATLVLGVLLVIYGIL 124 Query: 125 GLSRLSFKVARRDEKWIGGIVGIITGLISAATGVQVIPSMPFMQAIGMEKDELVQALGVF 184 GLSR F VAR EKWIGG VG++TG++SAATGVQVIPSMPFMQAIGMEKDELVQALGVF Sbjct: 125 GLSRSRFHVARAHEKWIGGPVGLVTGVVSAATGVQVIPSMPFMQAIGMEKDELVQALGVF 184 Query: 185 FTTATVALAFNLTASGLLTATTALPGAVAMAASFIGMFIGQAVRTRMQPEVFRRWFLISM 244 FT AT+ALAFNL +GLL+ TALPG +AM A+F GMF GQ VRTRM P+VFRRWFLIS+ Sbjct: 185 FTIATLALAFNLADAGLLSVATALPGGIAMVAAFAGMFAGQMVRTRMHPDVFRRWFLISI 244 Query: 245 ILLGIYLAGSALLKIHG 261 + LG YL L+K+ G Sbjct: 245 VGLGCYLFADTLVKMIG 261 >ref|NP_946254.1| hypothetical protein RPA0901 [Rhodopseudomonas palustris CGA009] emb|CAE26345.1| DUF81 [Rhodopseudomonas palustris CGA009] Length = 255 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 180/254 (70%), Positives = 213/254 (83%) Query: 8 QCAAMVDHLLIFIAFAFLLAGFVKGTLGLGLPTVAMGLLATTMAPGQAIAIVIVPAIVTN 67 Q AA+ D L+ IA F AGF+KG +GLGLPTV++GLLA M P QA+AIVIVPAIVTN Sbjct: 2 QAAAVFDPFLLIIAAVFAFAGFIKGVIGLGLPTVSIGLLAIAMPPAQAVAIVIVPAIVTN 61 Query: 68 IWQTFVGPYLRDIIKRLWPLMLGTVAGIWINAGLLTGPYAAYGTVVLGVLLVIYAIVGLS 127 IWQTFVG YLRDI++RLWPL+LGTV GI + AGL+TGPYA YG++VLGVLLV Y I+GLS Sbjct: 62 IWQTFVGSYLRDILRRLWPLLLGTVIGIRLGAGLMTGPYARYGSLVLGVLLVAYGILGLS 121 Query: 128 RLSFKVARRDEKWIGGIVGIITGLISAATGVQVIPSMPFMQAIGMEKDELVQALGVFFTT 187 + SF +A EKWIGG VG+ITG+ISAATGVQVIPSMP++QAIGMEKDELVQALGVFFTT Sbjct: 122 KRSFHLAPSREKWIGGPVGLITGVISAATGVQVIPSMPYLQAIGMEKDELVQALGVFFTT 181 Query: 188 ATVALAFNLTASGLLTATTALPGAVAMAASFIGMFIGQAVRTRMQPEVFRRWFLISMILL 247 AT+ALA NLT +GLL+ TALPG +A+ A+F GMF GQAVRTRM PE FRRWFLI++I L Sbjct: 182 ATLALAVNLTDAGLLSTATALPGLIALVAAFAGMFGGQAVRTRMHPETFRRWFLIALIGL 241 Query: 248 GIYLAGSALLKIHG 261 G+YLA + L+K+ G Sbjct: 242 GLYLAATTLVKLFG 255