BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0207.0003.p (232 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001236743.1| Crp/FNR family transcriptional regulator [Br... 411 e-113 ref|NP_766997.1| transcriptional regulator [Bradyrhizobium japon... 409 e-112 ref|YP_001208774.1| CRP/FNR family transcriptional regulator [Br... 408 e-112 ref|YP_568144.1| cyclic nucleotide-binding protein [Rhodopseudom... 394 e-108 ref|YP_484515.1| Crp/FNR family transcriptional regulator [Rhodo... 388 e-106 >ref|YP_001236743.1| Crp/FNR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ32837.1| transcriptional regulator, Crp/Fnr family [Bradyrhizobium sp. BTAi1] Length = 225 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 196/224 (87%), Positives = 215/224 (95%) Query: 9 MSKQAEFAVILKMNPMFADLGADELQRLSGLCHTQQLATGEVLFQKGDPGDALFGVRRGQ 68 MSKQAEFAVILKMNPMFADLGADELQRLS LCHTQ L++GEVLFQKGDPG+ALFGVRRGQ Sbjct: 2 MSKQAEFAVILKMNPMFADLGADELQRLSNLCHTQHLSSGEVLFQKGDPGNALFGVRRGQ 61 Query: 69 IRIETGASDGSRLTLNFMGSGDLFGEVAVLDGQDRTADATAGEPSELFVLRRQDFLGFLE 128 IRIETGA+DGSRLTLNFMG GDLFGEVAVLDGQ+RTADATAGE +ELFVLRR+DFL FLE Sbjct: 62 IRIETGATDGSRLTLNFMGPGDLFGEVAVLDGQERTADATAGETTELFVLRREDFLSFLE 121 Query: 129 REPKVAVRLIELLCQRIRWQSERMEESVLQPLPVRLARRLCALAEDFGSEVHISQEQLGI 188 REPKVA+++I+LLCQRIRWQSERMEESVLQPLP+RLARRLCALAEDFGSEVHISQEQLGI Sbjct: 122 REPKVAIKIIQLLCQRIRWQSERMEESVLQPLPIRLARRLCALAEDFGSEVHISQEQLGI 181 Query: 189 FVGAARESVNRQLQTWRRDGIVDLQRGRIMLHNMTKLTAVARND 232 FVGAARESVNRQLQ WR+D I+DLQRGRI+LH++TKL +ARN+ Sbjct: 182 FVGAARESVNRQLQAWRKDKILDLQRGRILLHDLTKLNTIARNE 225 >ref|NP_766997.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC45622.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 224 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 197/224 (87%), Positives = 212/224 (94%) Query: 9 MSKQAEFAVILKMNPMFADLGADELQRLSGLCHTQQLATGEVLFQKGDPGDALFGVRRGQ 68 MSKQAEFAVILKMNPMFADLGADELQRLS LCHTQ LA GEVLFQKGD GDALFG+RRGQ Sbjct: 1 MSKQAEFAVILKMNPMFADLGADELQRLSNLCHTQHLANGEVLFQKGDAGDALFGMRRGQ 60 Query: 69 IRIETGASDGSRLTLNFMGSGDLFGEVAVLDGQDRTADATAGEPSELFVLRRQDFLGFLE 128 +RIETGA+DGSRLTLNFMG GDLFGEVAVLDGQ+RTADATAGE SELFVLRR+DFL FLE Sbjct: 61 VRIETGAADGSRLTLNFMGPGDLFGEVAVLDGQNRTADATAGEASELFVLRREDFLAFLE 120 Query: 129 REPKVAVRLIELLCQRIRWQSERMEESVLQPLPVRLARRLCALAEDFGSEVHISQEQLGI 188 REPKVA+++I LLCQRIRWQSERMEES+LQPLPVRLARRLCALA DFGSEVHISQEQLG+ Sbjct: 121 REPKVAIKIIALLCQRIRWQSERMEESMLQPLPVRLARRLCALAADFGSEVHISQEQLGV 180 Query: 189 FVGAARESVNRQLQTWRRDGIVDLQRGRIMLHNMTKLTAVARND 232 FVGAARESVNRQLQ WR+D I+DLQRGRI+L NMTKLTA+ARN+ Sbjct: 181 FVGAARESVNRQLQAWRKDAILDLQRGRILLRNMTKLTAIARNE 224 >ref|YP_001208774.1| CRP/FNR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL80559.1| putative transcriptional regulator, Crp/Fnr family [Bradyrhizobium sp. ORS 278] Length = 225 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/224 (86%), Positives = 214/224 (95%) Query: 9 MSKQAEFAVILKMNPMFADLGADELQRLSGLCHTQQLATGEVLFQKGDPGDALFGVRRGQ 68 MSKQAEFAVILKMNPMFADLG+DELQR+S LCHTQ L+ GEVLFQKGDPG+ALFGVRRGQ Sbjct: 2 MSKQAEFAVILKMNPMFADLGSDELQRISNLCHTQHLSAGEVLFQKGDPGNALFGVRRGQ 61 Query: 69 IRIETGASDGSRLTLNFMGSGDLFGEVAVLDGQDRTADATAGEPSELFVLRRQDFLGFLE 128 IRIETGA+DGSRLTLNFMG GDLFGEVAVLDGQ+RTADATAGE +ELFVLRR+DFL FLE Sbjct: 62 IRIETGATDGSRLTLNFMGPGDLFGEVAVLDGQERTADATAGEATELFVLRREDFLNFLE 121 Query: 129 REPKVAVRLIELLCQRIRWQSERMEESVLQPLPVRLARRLCALAEDFGSEVHISQEQLGI 188 REPKVA+++I+LLCQRIRWQSERMEESVLQPLP+RLARRLCALAEDFGSEVHISQEQLG+ Sbjct: 122 REPKVAIKIIQLLCQRIRWQSERMEESVLQPLPIRLARRLCALAEDFGSEVHISQEQLGV 181 Query: 189 FVGAARESVNRQLQTWRRDGIVDLQRGRIMLHNMTKLTAVARND 232 FVGAARESVNRQLQ WR+D I+DLQRGRI+LH++TKL +ARN+ Sbjct: 182 FVGAARESVNRQLQAWRKDKILDLQRGRILLHDLTKLNTIARNE 225 >ref|YP_568144.1| cyclic nucleotide-binding protein [Rhodopseudomonas palustris BisB5] gb|ABE38243.1| transcriptional regulator, Crp/Fnr family [Rhodopseudomonas palustris BisB5] Length = 226 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 192/223 (86%), Positives = 208/223 (93%) Query: 9 MSKQAEFAVILKMNPMFADLGADELQRLSGLCHTQQLATGEVLFQKGDPGDALFGVRRGQ 68 MS QAEFAVILKMNP+FADLG++ELQR++GLCHTQQL GE+LFQKGD G ALFGVRRGQ Sbjct: 1 MSTQAEFAVILKMNPLFADLGSEELQRIAGLCHTQQLNAGEMLFQKGDEGGALFGVRRGQ 60 Query: 69 IRIETGASDGSRLTLNFMGSGDLFGEVAVLDGQDRTADATAGEPSELFVLRRQDFLGFLE 128 IRIETGASDGSRLTLNF+G GDLFGEVAVLDGQ RTADATAGEP+ELFVLRR+DFLG LE Sbjct: 61 IRIETGASDGSRLTLNFLGPGDLFGEVAVLDGQSRTADATAGEPTELFVLRREDFLGHLE 120 Query: 129 REPKVAVRLIELLCQRIRWQSERMEESVLQPLPVRLARRLCALAEDFGSEVHISQEQLGI 188 REP VAV+LI LLCQRIRW SERMEESVLQPLPVRLARRLCALA DFG+EVHISQEQLG+ Sbjct: 121 REPTVAVKLIALLCQRIRWMSERMEESVLQPLPVRLARRLCALAADFGAEVHISQEQLGV 180 Query: 189 FVGAARESVNRQLQTWRRDGIVDLQRGRIMLHNMTKLTAVARN 231 FVGAARESVNRQLQ+WR+DGI+DL RGRIML NM +LTAVARN Sbjct: 181 FVGAARESVNRQLQSWRKDGILDLHRGRIMLKNMGRLTAVARN 223 >ref|YP_484515.1| Crp/FNR family transcriptional regulator [Rhodopseudomonas palustris HaA2] gb|ABD05604.1| transcriptional regulator, Crp/Fnr family [Rhodopseudomonas palustris HaA2] Length = 226 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 189/223 (84%), Positives = 207/223 (92%) Query: 9 MSKQAEFAVILKMNPMFADLGADELQRLSGLCHTQQLATGEVLFQKGDPGDALFGVRRGQ 68 MS QAEFAVILK+NP+FADLG +ELQR++GLCHTQQL GE+LFQKGD GDALFGVRRGQ Sbjct: 1 MSTQAEFAVILKLNPLFADLGPEELQRIAGLCHTQQLNAGEMLFQKGDDGDALFGVRRGQ 60 Query: 69 IRIETGASDGSRLTLNFMGSGDLFGEVAVLDGQDRTADATAGEPSELFVLRRQDFLGFLE 128 IRIETGASDGSRLTLNF+G GDLFGEVAVLDGQ RTADATAGEP+ELFVLRR DFLG LE Sbjct: 61 IRIETGASDGSRLTLNFLGPGDLFGEVAVLDGQSRTADATAGEPTELFVLRRDDFLGHLE 120 Query: 129 REPKVAVRLIELLCQRIRWQSERMEESVLQPLPVRLARRLCALAEDFGSEVHISQEQLGI 188 REPK+AV+LI LLCQRIRW SERMEESVLQPLPVRLARRLCALA DFG+EVHISQEQLG+ Sbjct: 121 REPKLAVKLIALLCQRIRWMSERMEESVLQPLPVRLARRLCALAADFGAEVHISQEQLGV 180 Query: 189 FVGAARESVNRQLQTWRRDGIVDLQRGRIMLHNMTKLTAVARN 231 FVGAARESVNRQLQ+WR+DGI+DL RGRI+L NM +LT VAR+ Sbjct: 181 FVGAARESVNRQLQSWRKDGILDLHRGRILLKNMGRLTQVARS 223