BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0206.0020.p (174 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770603.1| transcriptional regulator [Bradyrhizobium japon... 303 5e-81 ref|ZP_07026849.1| transcriptional regulator, LysR family [Afipi... 265 3e-69 ref|YP_002289455.1| transcriptional regulatory protein [Oligotro... 262 2e-68 ref|NP_103648.1| transcriptional regulator [Mesorhizobium loti M... 221 2e-56 ref|YP_001632199.1| LysR family transcriptional regulator [Borde... 172 2e-41 >ref|NP_770603.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC49228.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 300 Score = 303 bits (777), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 152/163 (93%), Positives = 154/163 (94%) Query: 1 MNTHDLVAFVAVVETGSIVAASARLNLTQPGVTRRIQNLEEMLGAQLLDRLSKPLKPTAA 60 MNTHDLVAFVAVVETGSIVAASARLNLTQPGVTRRIQNLEEMLGA+LLDRLSKPLKPTAA Sbjct: 1 MNTHDLVAFVAVVETGSIVAASARLNLTQPGVTRRIQNLEEMLGAKLLDRLSKPLKPTAA 60 Query: 61 GIEAYEQGRRLLRMLDDLKSGVANDGVVRGEFRLGLTPFLSEAGLTGPLDAVRGEFPALA 120 G EAYEQGRRLLRMLDDLKSGVANDGVVRGEFRLGLTPFLSEAGLTGPLDAVR EFPALA Sbjct: 61 GHEAYEQGRRLLRMLDDLKSGVANDGVVRGEFRLGLTPFLSEAGLTGPLDAVRAEFPALA 120 Query: 121 VRVVSGWSPNHMERVSRNELDAAAICLPDGTAPPDDLEASDLG 163 VRVVSGWSPN +ERV RNELDAAAICLPDG PP DL A DLG Sbjct: 121 VRVVSGWSPNQLERVCRNELDAAAICLPDGAVPPSDLAADDLG 163 >ref|ZP_07026849.1| transcriptional regulator, LysR family [Afipia sp. 1NLS2] gb|EFI51692.1| transcriptional regulator, LysR family [Afipia sp. 1NLS2] Length = 298 Score = 265 bits (676), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 130/163 (79%), Positives = 146/163 (89%) Query: 1 MNTHDLVAFVAVVETGSIVAASARLNLTQPGVTRRIQNLEEMLGAQLLDRLSKPLKPTAA 60 MNT+DLVAFVAVVETGSIVAASARLNLTQPGVTRR+QNLE+MLG +LLDR SKPLKPT A Sbjct: 1 MNTNDLVAFVAVVETGSIVAASARLNLTQPGVTRRVQNLEDMLGVELLDRQSKPLKPTTA 60 Query: 61 GIEAYEQGRRLLRMLDDLKSGVANDGVVRGEFRLGLTPFLSEAGLTGPLDAVRGEFPALA 120 G EAYEQGRR+LR LDDLKSGVA DGVVRGEFRLG+TP+LSEAGL+ PLD +R +FP+L+ Sbjct: 61 GREAYEQGRRVLRTLDDLKSGVAADGVVRGEFRLGITPYLSEAGLSVPLDRLRAQFPSLS 120 Query: 121 VRVVSGWSPNHMERVSRNELDAAAICLPDGTAPPDDLEASDLG 163 +RV+SGWS ERV RNELDAAAICLPDG APP++LE DLG Sbjct: 121 LRVISGWSLEQTERVGRNELDAAAICLPDGVAPPEELECDDLG 163 >ref|YP_002289455.1| transcriptional regulatory protein [Oligotropha carboxidovorans OM5] ref|YP_004632531.1| LysR family transcriptional regulator [Oligotropha carboxidovorans OM5] gb|ACI93590.1| transcriptional regulatory protein [Oligotropha carboxidovorans OM5] gb|AEI02714.1| transcriptional regulator, LysR family [Oligotropha carboxidovorans OM4] gb|AEI06290.1| transcriptional regulator, LysR family [Oligotropha carboxidovorans OM5] Length = 298 Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 126/163 (77%), Positives = 143/163 (87%) Query: 1 MNTHDLVAFVAVVETGSIVAASARLNLTQPGVTRRIQNLEEMLGAQLLDRLSKPLKPTAA 60 MNT+DL AF+AVVETGSIVAAS RLNLTQPGVTRR+Q+LEEMLG +LLDR SKPLKPT A Sbjct: 1 MNTNDLAAFIAVVETGSIVAASTRLNLTQPGVTRRVQSLEEMLGVELLDRQSKPLKPTTA 60 Query: 61 GIEAYEQGRRLLRMLDDLKSGVANDGVVRGEFRLGLTPFLSEAGLTGPLDAVRGEFPALA 120 G EAYEQGRR+LR LDDLKSGVA DGVVRGEFRLG+TP+LSEA L+ PLD +R +FPAL+ Sbjct: 61 GREAYEQGRRVLRTLDDLKSGVAADGVVRGEFRLGVTPYLSEAALSAPLDMLRAQFPALS 120 Query: 121 VRVVSGWSPNHMERVSRNELDAAAICLPDGTAPPDDLEASDLG 163 V +VSGWSP+H ERV RN+LDAAAICLPDG PP++L DLG Sbjct: 121 VHIVSGWSPDHAERVCRNQLDAAAICLPDGVTPPEELVCDDLG 163 >ref|NP_103648.1| transcriptional regulator [Mesorhizobium loti MAFF303099] dbj|BAB49434.1| probable transcriptional regulator [Mesorhizobium loti MAFF303099] Length = 304 Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 109/163 (66%), Positives = 131/163 (80%) Query: 1 MNTHDLVAFVAVVETGSIVAASARLNLTQPGVTRRIQNLEEMLGAQLLDRLSKPLKPTAA 60 MN HDL AF+AVVETGSIV ASARLNLTQPGVTRRIQNLE+ L LLDR SKPLKPTA+ Sbjct: 3 MNIHDLEAFIAVVETGSIVGASARLNLTQPGVTRRIQNLEDGLATALLDRQSKPLKPTAS 62 Query: 61 GIEAYEQGRRLLRMLDDLKSGVANDGVVRGEFRLGLTPFLSEAGLTGPLDAVRGEFPALA 120 G EAYE GRR+LR L+DL++GV+ G V+GEFRLG+ P+LS+A L PLD +R FP L Sbjct: 63 GREAYEHGRRVLRSLEDLRAGVSPQGEVKGEFRLGVMPYLSDAALALPLDTLRAAFPQLT 122 Query: 121 VRVVSGWSPNHMERVSRNELDAAAICLPDGTAPPDDLEASDLG 163 +R+ SGWSP +E+V+R+ELDA A+CL +G APPD+L DLG Sbjct: 123 LRITSGWSPRLVEQVARSELDAVAVCLAEGLAPPDELVCDDLG 165 >ref|YP_001632199.1| LysR family transcriptional regulator [Bordetella petrii DSM 12804] emb|CAP43931.1| transcriptional regulator, LysR-family [Bordetella petrii] Length = 305 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 90/165 (54%), Positives = 114/165 (69%) Query: 1 MNTHDLVAFVAVVETGSIVAASARLNLTQPGVTRRIQNLEEMLGAQLLDRLSKPLKPTAA 60 MNT D+ AFVAVVETGS+ AAS RL+LTQPGV+RR++NLE++LG L+DR SKPLKP+AA Sbjct: 1 MNTRDIEAFVAVVETGSLSAASGRLHLTQPGVSRRLRNLEDLLGVALVDRQSKPLKPSAA 60 Query: 61 GIEAYEQGRRLLRMLDDLKSGVANDGVVRGEFRLGLTPFLSEAGLTGPLDAVRGEFPALA 120 G+ YE GR +L + L+ G A D RGEFR+G+ PFL+E L PLD +RG +P L+ Sbjct: 61 GLRVYELGRGVLAAVAALRQGAAPDAEPRGEFRVGVPPFLAEPALAEPLDVLRGRYPGLS 120 Query: 121 VRVVSGWSPNHMERVSRNELDAAAICLPDGTAPPDDLEASDLGXS 165 V V + WSP+ + V LDAAAI +PD P L A L S Sbjct: 121 VNVTAAWSPSLVPMVENGALDAAAIMMPDTETLPAHLCALPLARS 165