BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0206.0011.p (498 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770594.1| methylmalonate-semialdehyde dehydrogenase [Brad... 983 0.0 ref|NP_948789.1| methylmalonate-semialdehyde dehydrogenase [Rhod... 955 0.0 ref|YP_001992911.1| methylmalonate-semialdehyde dehydrogenase [R... 954 0.0 ref|YP_004108269.1| methylmalonate-semialdehyde dehydrogenase [R... 952 0.0 ref|YP_485734.1| methylmalonate-semialdehyde dehydrogenase [Rhod... 951 0.0 >ref|NP_770594.1| methylmalonate-semialdehyde dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC49219.1| methylmalonate-semialdehyde dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 498 Score = 983 bits (2542), Expect = 0.0, Method: Compositional matrix adjust. Identities = 477/498 (95%), Positives = 488/498 (97%) Query: 1 MRSIGHFIGGKEVKGTSGRTADVFEPMTGEVQANVALASKVELRAAVENAKAAQPEWAAT 60 MRSIGHFIGGKEVKGTSGRTADVFEPMTG+VQA VALASK E+RAAVENA+AAQPEWAAT Sbjct: 1 MRSIGHFIGGKEVKGTSGRTADVFEPMTGDVQAKVALASKAEVRAAVENARAAQPEWAAT 60 Query: 61 NPQRRARVMMRFLELVQRDYDKLAELLAREHGKTVPDAKGDIQRGLEVAEFACGIPHLMK 120 NPQRRARVMM+F+ELVQRDYDKLAELLAREHGKTVPDAKGDIQRGLEVAEFACGIPHLMK Sbjct: 61 NPQRRARVMMKFVELVQRDYDKLAELLAREHGKTVPDAKGDIQRGLEVAEFACGIPHLMK 120 Query: 121 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG 180 GEYTEGAGPGIDIYSMRQ LGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG Sbjct: 121 GEYTEGAGPGIDIYSMRQALGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG 180 Query: 181 VPMALAELMIEAGLPDGILNVVNGDKEAVDAILDDPDIKAIGFVGSTPIAQYIYERAAQT 240 VPM LAELM+EAGLP GILNVVNGDKEAVDAILDDPDIKA+GFVGSTPIAQYIYERAAQT Sbjct: 181 VPMLLAELMMEAGLPAGILNVVNGDKEAVDAILDDPDIKAVGFVGSTPIAQYIYERAAQT 240 Query: 241 GKRCQCFGGAKNHAIVMPDADMDQTVDALIGAGYGSAGERCMAVSVAVPVGKTTADRLME 300 GKRCQCFGGAKNHAI+MPDADMDQ VDALIGAGYGSAGERCMAVSVAVPVGK TADRLME Sbjct: 241 GKRCQCFGGAKNHAIIMPDADMDQAVDALIGAGYGSAGERCMAVSVAVPVGKPTADRLME 300 Query: 301 KLIPRVESLKIGTSVDPSADYGPLVTREAVEKVKSYIDIGIKEGATLAVDGRGFKMQGYE 360 KLIPRVESLKIGTS+DPSADYGPLVTREAVEKVK YIDIGIKEGATLAVDGRGFKMQGYE Sbjct: 301 KLIPRVESLKIGTSIDPSADYGPLVTREAVEKVKGYIDIGIKEGATLAVDGRGFKMQGYE 360 Query: 361 KGFYLGGSLFDNVTKDMRIYKEEIFGPVLSVVRAHDYHEALALPSDHDYGNGVAIFTRDG 420 KGFYLGGSLFDNVTKDMRIYKEEIFGPVLSVVRAHDY EALALPS+HDYGNGVAIFTRDG Sbjct: 361 KGFYLGGSLFDNVTKDMRIYKEEIFGPVLSVVRAHDYKEALALPSEHDYGNGVAIFTRDG 420 Query: 421 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSIRFYTKTKTVTS 480 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDS+RFYTKTKTVTS Sbjct: 421 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSVRFYTKTKTVTS 480 Query: 481 RWPSGVKEGAEFSIPTMK 498 RWPSGVKEGAEFSIP MK Sbjct: 481 RWPSGVKEGAEFSIPLMK 498 >ref|NP_948789.1| methylmalonate-semialdehyde dehydrogenase [Rhodopseudomonas palustris CGA009] emb|CAE28891.1| putative malonic semialdehyde oxidative decarboxylase [Rhodopseudomonas palustris CGA009] Length = 498 Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/498 (91%), Positives = 481/498 (96%) Query: 1 MRSIGHFIGGKEVKGTSGRTADVFEPMTGEVQANVALASKVELRAAVENAKAAQPEWAAT 60 MR++GHFIGGKEV+G SGR ADVFEPMTGEV+A VALA+K ELRAAVENAKAAQPEW AT Sbjct: 1 MRTVGHFIGGKEVEGKSGRFADVFEPMTGEVKAKVALATKAELRAAVENAKAAQPEWGAT 60 Query: 61 NPQRRARVMMRFLELVQRDYDKLAELLAREHGKTVPDAKGDIQRGLEVAEFACGIPHLMK 120 NPQRRARV+M+FLELVQRDYDKLAELLAREHGKT+PDAKGDIQRGLEVAEFACGIPHLMK Sbjct: 61 NPQRRARVLMKFLELVQRDYDKLAELLAREHGKTIPDAKGDIQRGLEVAEFACGIPHLMK 120 Query: 121 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG 180 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG Sbjct: 121 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG 180 Query: 181 VPMALAELMIEAGLPDGILNVVNGDKEAVDAILDDPDIKAIGFVGSTPIAQYIYERAAQT 240 VPMALA LM+EAGLP GILNVVNGDKEAVDAILDDPDIKA+GFVGS+PIAQYIYERAAQT Sbjct: 181 VPMALAALMLEAGLPPGILNVVNGDKEAVDAILDDPDIKAVGFVGSSPIAQYIYERAAQT 240 Query: 241 GKRCQCFGGAKNHAIVMPDADMDQTVDALIGAGYGSAGERCMAVSVAVPVGKTTADRLME 300 GKR QCFGGAKNHAI+MPDAD+DQTVDALIGAGYGSAGERCMA+SVAVPVGK TAD LM Sbjct: 241 GKRAQCFGGAKNHAIIMPDADIDQTVDALIGAGYGSAGERCMAISVAVPVGKATADALMS 300 Query: 301 KLIPRVESLKIGTSVDPSADYGPLVTREAVEKVKSYIDIGIKEGATLAVDGRGFKMQGYE 360 KLIPRVE+LKIG S DP+ADYGPLVT+EA+E+VK+Y+DIG+KEGATLAVDGRGFKMQGYE Sbjct: 301 KLIPRVEALKIGPSTDPTADYGPLVTKEALERVKNYVDIGVKEGATLAVDGRGFKMQGYE 360 Query: 361 KGFYLGGSLFDNVTKDMRIYKEEIFGPVLSVVRAHDYHEALALPSDHDYGNGVAIFTRDG 420 GFY+GG LFDNVTKDMRIYKEEIFGPVLSVVRAHDY EAL+LPSDHDYGNGVAIFTRDG Sbjct: 361 NGFYMGGCLFDNVTKDMRIYKEEIFGPVLSVVRAHDYAEALSLPSDHDYGNGVAIFTRDG 420 Query: 421 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSIRFYTKTKTVTS 480 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSIRFYTKTKTVTS Sbjct: 421 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSIRFYTKTKTVTS 480 Query: 481 RWPSGVKEGAEFSIPTMK 498 RWPSGVKEGAEFSIP MK Sbjct: 481 RWPSGVKEGAEFSIPLMK 498 >ref|YP_001992911.1| methylmalonate-semialdehyde dehydrogenase [Rhodopseudomonas palustris TIE-1] gb|ACF02436.1| methylmalonate-semialdehyde dehydrogenase [Rhodopseudomonas palustris TIE-1] Length = 498 Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/498 (91%), Positives = 481/498 (96%) Query: 1 MRSIGHFIGGKEVKGTSGRTADVFEPMTGEVQANVALASKVELRAAVENAKAAQPEWAAT 60 MR++GHFIGGKEV+G SGR ADVFEPMTGEV+A VALA+K ELRAAVENAKAAQPEW AT Sbjct: 1 MRTVGHFIGGKEVEGKSGRFADVFEPMTGEVKAKVALATKAELRAAVENAKAAQPEWGAT 60 Query: 61 NPQRRARVMMRFLELVQRDYDKLAELLAREHGKTVPDAKGDIQRGLEVAEFACGIPHLMK 120 NPQRRARV+M+FLELVQRDYDKLAELLAREHGKT+PDAKGDIQRGLEVAEFACGIPHLMK Sbjct: 61 NPQRRARVLMKFLELVQRDYDKLAELLAREHGKTIPDAKGDIQRGLEVAEFACGIPHLMK 120 Query: 121 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG 180 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG Sbjct: 121 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG 180 Query: 181 VPMALAELMIEAGLPDGILNVVNGDKEAVDAILDDPDIKAIGFVGSTPIAQYIYERAAQT 240 VPMALA LM+EAGLP GILNVVNGDKEAVDAILDDPDIKA+GFVGS+PIAQYIYERAAQT Sbjct: 181 VPMALAALMLEAGLPPGILNVVNGDKEAVDAILDDPDIKAVGFVGSSPIAQYIYERAAQT 240 Query: 241 GKRCQCFGGAKNHAIVMPDADMDQTVDALIGAGYGSAGERCMAVSVAVPVGKTTADRLME 300 GKR QCFGGAKNHAI+MPDAD+DQTVDALIGAGYGSAGERCMA+SVAVPVGK TA+ LM Sbjct: 241 GKRAQCFGGAKNHAIIMPDADIDQTVDALIGAGYGSAGERCMAISVAVPVGKATAEALMS 300 Query: 301 KLIPRVESLKIGTSVDPSADYGPLVTREAVEKVKSYIDIGIKEGATLAVDGRGFKMQGYE 360 KLIPRVE+LKIG S DP+ADYGPLVT+EA+E+VK+Y+DIG+KEGATLAVDGRGFKMQGYE Sbjct: 301 KLIPRVEALKIGPSTDPTADYGPLVTKEALERVKNYVDIGVKEGATLAVDGRGFKMQGYE 360 Query: 361 KGFYLGGSLFDNVTKDMRIYKEEIFGPVLSVVRAHDYHEALALPSDHDYGNGVAIFTRDG 420 GFY+GG LFDNVTKDMRIYKEEIFGPVLSVVRAHDY EALALPSDHDYGNGVAIFTRDG Sbjct: 361 NGFYMGGCLFDNVTKDMRIYKEEIFGPVLSVVRAHDYAEALALPSDHDYGNGVAIFTRDG 420 Query: 421 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSIRFYTKTKTVTS 480 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSIRFYTKTKTVTS Sbjct: 421 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSIRFYTKTKTVTS 480 Query: 481 RWPSGVKEGAEFSIPTMK 498 RWPSGVKEGAEFSIP MK Sbjct: 481 RWPSGVKEGAEFSIPLMK 498 >ref|YP_004108269.1| methylmalonate-semialdehyde dehydrogenase [Rhodopseudomonas palustris DX-1] gb|ADU43536.1| methylmalonate-semialdehyde dehydrogenase [Rhodopseudomonas palustris DX-1] Length = 498 Score = 952 bits (2460), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/498 (91%), Positives = 481/498 (96%) Query: 1 MRSIGHFIGGKEVKGTSGRTADVFEPMTGEVQANVALASKVELRAAVENAKAAQPEWAAT 60 MR++GHFIGGKEV+G SGR ADVFEPMTGEV+A VALA+K ELRAAVENAKAAQPEW AT Sbjct: 1 MRTVGHFIGGKEVEGKSGRFADVFEPMTGEVKAKVALATKAELRAAVENAKAAQPEWGAT 60 Query: 61 NPQRRARVMMRFLELVQRDYDKLAELLAREHGKTVPDAKGDIQRGLEVAEFACGIPHLMK 120 NPQRRARV+M+FLELVQRDYDKLAELLAREHGKT+PDAKGDIQRGLEVAEFACGIPHLMK Sbjct: 61 NPQRRARVLMKFLELVQRDYDKLAELLAREHGKTIPDAKGDIQRGLEVAEFACGIPHLMK 120 Query: 121 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG 180 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG Sbjct: 121 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG 180 Query: 181 VPMALAELMIEAGLPDGILNVVNGDKEAVDAILDDPDIKAIGFVGSTPIAQYIYERAAQT 240 VPMALA LM+EAGLP GILNVVNGDKEAVDAILDDPDIKA+GFVGS+PIAQYIYERAAQT Sbjct: 181 VPMALAALMLEAGLPPGILNVVNGDKEAVDAILDDPDIKAVGFVGSSPIAQYIYERAAQT 240 Query: 241 GKRCQCFGGAKNHAIVMPDADMDQTVDALIGAGYGSAGERCMAVSVAVPVGKTTADRLME 300 GKR QCFGGAKNHAI+MPDAD+DQTVDALIGAGYGSAGERCMA+SVAVPVGK TAD LM Sbjct: 241 GKRAQCFGGAKNHAIIMPDADIDQTVDALIGAGYGSAGERCMAISVAVPVGKATADALMS 300 Query: 301 KLIPRVESLKIGTSVDPSADYGPLVTREAVEKVKSYIDIGIKEGATLAVDGRGFKMQGYE 360 KLIPRVE+LKIG S DP+ADYGPLVT+EA+E+VK+Y++IG++EGATLAVDGRGFKMQGYE Sbjct: 301 KLIPRVEALKIGPSTDPTADYGPLVTKEALERVKNYVEIGVQEGATLAVDGRGFKMQGYE 360 Query: 361 KGFYLGGSLFDNVTKDMRIYKEEIFGPVLSVVRAHDYHEALALPSDHDYGNGVAIFTRDG 420 GFY+GG LFDNVTKDMRIYKEEIFGPVLSVVRAHDY EALALPSDHDYGNGVAIFTRDG Sbjct: 361 NGFYMGGCLFDNVTKDMRIYKEEIFGPVLSVVRAHDYAEALALPSDHDYGNGVAIFTRDG 420 Query: 421 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSIRFYTKTKTVTS 480 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDS+RFYTKTKTVTS Sbjct: 421 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSVRFYTKTKTVTS 480 Query: 481 RWPSGVKEGAEFSIPTMK 498 RWPSGVKEGAEFSIP MK Sbjct: 481 RWPSGVKEGAEFSIPLMK 498 >ref|YP_485734.1| methylmalonate-semialdehyde dehydrogenase [Rhodopseudomonas palustris HaA2] gb|ABD06823.1| methylmalonate-semialdehyde dehydrogenase (acylating) [Rhodopseudomonas palustris HaA2] Length = 498 Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/498 (90%), Positives = 482/498 (96%) Query: 1 MRSIGHFIGGKEVKGTSGRTADVFEPMTGEVQANVALASKVELRAAVENAKAAQPEWAAT 60 MR+IGHFIGGKEV+G SGR ADVFEPMTGEV+A VALA+K E+RAA+ENAKAAQPEW AT Sbjct: 1 MRTIGHFIGGKEVEGKSGRFADVFEPMTGEVKAKVALATKAEMRAAIENAKAAQPEWGAT 60 Query: 61 NPQRRARVMMRFLELVQRDYDKLAELLAREHGKTVPDAKGDIQRGLEVAEFACGIPHLMK 120 NPQRRARV+M+FL+LVQRDYDKLAELLAREHGKT+PDAKGDIQRGLEVAEFACGIPHLMK Sbjct: 61 NPQRRARVLMKFLDLVQRDYDKLAELLAREHGKTIPDAKGDIQRGLEVAEFACGIPHLMK 120 Query: 121 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG 180 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG Sbjct: 121 GEYTEGAGPGIDIYSMRQPLGVVAGITPFNFPAMIPMWKFAPAIACGNAFILKPSERDPG 180 Query: 181 VPMALAELMIEAGLPDGILNVVNGDKEAVDAILDDPDIKAIGFVGSTPIAQYIYERAAQT 240 VPMALA LM+EAGLP GILNVVNGDKEAVDAILDD DI+A+GFVGS+PIAQYIYERAA T Sbjct: 181 VPMALAALMLEAGLPPGILNVVNGDKEAVDAILDDADIRAVGFVGSSPIAQYIYERAAAT 240 Query: 241 GKRCQCFGGAKNHAIVMPDADMDQTVDALIGAGYGSAGERCMAVSVAVPVGKTTADRLME 300 GKR QCFGGAKNHAI+MPDAD+DQTVDALIGAGYGSAGERCMA+SVAVPVGK+TADRLME Sbjct: 241 GKRAQCFGGAKNHAIIMPDADLDQTVDALIGAGYGSAGERCMAISVAVPVGKSTADRLME 300 Query: 301 KLIPRVESLKIGTSVDPSADYGPLVTREAVEKVKSYIDIGIKEGATLAVDGRGFKMQGYE 360 KLIPRVE+LKIG S DPSAD+GPLVTREA+E+VK+Y++IG++EGATLAVDGRGFKMQGYE Sbjct: 301 KLIPRVEALKIGPSTDPSADFGPLVTREALERVKTYVEIGVQEGATLAVDGRGFKMQGYE 360 Query: 361 KGFYLGGSLFDNVTKDMRIYKEEIFGPVLSVVRAHDYHEALALPSDHDYGNGVAIFTRDG 420 GFY+GG LFDNVTKDMRIYKEEIFGPVLSVVRAHDY EALALPSDHDYGNGVAIFTRDG Sbjct: 361 NGFYMGGCLFDNVTKDMRIYKEEIFGPVLSVVRAHDYAEALALPSDHDYGNGVAIFTRDG 420 Query: 421 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSIRFYTKTKTVTS 480 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDS+RFYTKTKTVTS Sbjct: 421 DAARDFAAKVNVGMVGINVPIPVPIAYYTFGGWKKSGFGDLNQHGPDSVRFYTKTKTVTS 480 Query: 481 RWPSGVKEGAEFSIPTMK 498 RWPSGVKEGAEFSIP MK Sbjct: 481 RWPSGVKEGAEFSIPLMK 498