BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0206.0010.p (296 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770593.1| transcriptional regulator [Bradyrhizobium japon... 476 e-132 ref|YP_001769360.1| LysR family transcriptional regulator [Methy... 374 e-102 ref|YP_001523490.1| transcriptional regulatory protein [Azorhizo... 292 4e-77 ref|YP_001831758.1| LysR family transcriptional regulator [Beije... 291 6e-77 ref|YP_001417095.1| LysR family transcriptional regulator [Xanth... 288 7e-76 >ref|NP_770593.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC49218.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 302 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 237/279 (84%), Positives = 255/279 (91%) Query: 17 SVSCLXKQLGVDHATVIRRVDRLERHLSAKLFDRRKTGYLLTEAGQRVADSAEAMESTIV 76 SVS KQLGVDHATVIRRVDRLE+HLSAKLFDRRKTGYLLTEAGQRVADSAEAMESTIV Sbjct: 23 SVSAAAKQLGVDHATVIRRVDRLEKHLSAKLFDRRKTGYLLTEAGQRVADSAEAMESTIV 82 Query: 77 ANQEAVGGSRAHLTGTVRIGAPDGFGSHFLASRLVKFAERYPDLDLQLVATARLFSLSKR 136 ANQE VGGS A LTGTVRIGAPDGFG+ FLA RL FA+RYPDLDLQLVATARLFSLSKR Sbjct: 83 ANQEQVGGSVARLTGTVRIGAPDGFGTAFLAPRLAPFADRYPDLDLQLVATARLFSLSKR 142 Query: 137 EADIAISLTMPKEGRIVGRKLLDYTLGLYAAPAYLAQAPVIAARADLPRHRFVGYIEELL 196 EADIAISLTMPKEGRIVGRKLLDY LGLYAAPAYL + P I +R LP+HRFVGYIEELL Sbjct: 143 EADIAISLTMPKEGRIVGRKLLDYRLGLYAAPAYLDRFPTIVSREVLPQHRFVGYIEELL 202 Query: 197 FTPELDYLPQVSPKISAKFRSANLIAQLNATIAGFGIAVLPHFMATAHPELRPVLPDEVR 256 FTPELDYLPQVSP+ISA+FRSANLIAQLNAT++GFGIAVLPHFMA+ +P+L VLP+E+ Sbjct: 203 FTPELDYLPQVSPRISARFRSANLIAQLNATLSGFGIAVLPHFMASDYPQLVAVLPEEIS 262 Query: 257 ISRTFWLLMHADSKDLARIRAVADYIYETVEAERALFSG 295 I+RTFW+LMHADSKDLARIRAVADYI E VE ERALF+G Sbjct: 263 ITRTFWMLMHADSKDLARIRAVADYIGEIVERERALFAG 301 >ref|YP_001769360.1| LysR family transcriptional regulator [Methylobacterium sp. 4-46] gb|ACA16926.1| transcriptional regulator, LysR family [Methylobacterium sp. 4-46] Length = 307 Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust. Identities = 189/279 (67%), Positives = 222/279 (79%) Query: 17 SVSCLXKQLGVDHATVIRRVDRLERHLSAKLFDRRKTGYLLTEAGQRVADSAEAMESTIV 76 +VS + LGVDHATVIRR+DRLER L +LF RR +GY+ T+AGQ VA +A+A+ES I+ Sbjct: 23 TVSAAARLLGVDHATVIRRIDRLERQLGERLFHRRASGYVATQAGQAVAATADAVESAII 82 Query: 77 ANQEAVGGSRAHLTGTVRIGAPDGFGSHFLASRLVKFAERYPDLDLQLVATARLFSLSKR 136 Q VG S A LTGTVRIGAPDGFGS FLA RL ER+PDLD+QLVATARLFSLSKR Sbjct: 83 NGQSLVGRSAARLTGTVRIGAPDGFGSTFLAPRLTGLVERHPDLDIQLVATARLFSLSKR 142 Query: 137 EADIAISLTMPKEGRIVGRKLLDYTLGLYAAPAYLAQAPVIAARADLPRHRFVGYIEELL 196 EADIAI L++P+EGRIVGRKL DY L LYAAP+YL AP I +R DL RHRFVGYIEELL Sbjct: 143 EADIAIGLSLPREGRIVGRKLTDYALKLYAAPSYLRAAPPIESRRDLERHRFVGYIEELL 202 Query: 197 FTPELDYLPQVSPKISAKFRSANLIAQLNATIAGFGIAVLPHFMATAHPELRPVLPDEVR 256 +TPELDYL QVS I A+ RSAN+IAQL+A AG G+AVLP FMA P+L VLP EV Sbjct: 203 YTPELDYLRQVSSGIGARLRSANVIAQLHAVAAGIGLAVLPCFMAAGRPDLVCVLPREVV 262 Query: 257 ISRTFWLLMHADSKDLARIRAVADYIYETVEAERALFSG 295 ++R+FWLLMHADS+DLAR+RAVA++IY VE +R +F G Sbjct: 263 LTRSFWLLMHADSRDLARVRAVAEHIYAVVERDRDVFFG 301 >ref|YP_001523490.1| transcriptional regulatory protein [Azorhizobium caulinodans ORS 571] dbj|BAF86572.1| transcriptional regulatory protein [Azorhizobium caulinodans ORS 571] Length = 313 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 149/281 (53%), Positives = 200/281 (71%) Query: 15 TTSVSCLXKQLGVDHATVIRRVDRLERHLSAKLFDRRKTGYLLTEAGQRVADSAEAMEST 74 + S++ +Q+GV+H+TV RR+ LE L AKLFDRR G LLT G+R+ +AE ME+ Sbjct: 31 SGSLTAAARQMGVEHSTVSRRITALETALGAKLFDRRTGGLLLTPQGERLMAAAEGMEAL 90 Query: 75 IVANQEAVGGSRAHLTGTVRIGAPDGFGSHFLASRLVKFAERYPDLDLQLVATARLFSLS 134 ++ Q + G+ ++GTVRIGAPDGFG+ FLA RL F+ ++P L++QL+A RL SLS Sbjct: 91 ALSAQGEIAGADLGVSGTVRIGAPDGFGTVFLAPRLGAFSRQHPALEIQLLAMPRLISLS 150 Query: 135 KREADIAISLTMPKEGRIVGRKLLDYTLGLYAAPAYLAQAPVIAARADLPRHRFVGYIEE 194 KREADIAISL+ PKEGR+ RKL DY LGLYAA AYL I +RA L RH F+GYI++ Sbjct: 151 KREADIAISLSRPKEGRLHARKLTDYRLGLYAAVAYLETHGPIESRAALGRHPFIGYIDD 210 Query: 195 LLFTPELDYLPQVSPKISAKFRSANLIAQLNATIAGFGIAVLPHFMATAHPELRPVLPDE 254 L++ PELDY+P V+ ++ + +S+NL+AQ+ AT AG G+ VLP FM A P+L PVL E Sbjct: 211 LIYAPELDYVPLVARELKPRIKSSNLVAQMEATRAGAGVCVLPCFMGDAMPDLVPVLRGE 270 Query: 255 VRISRTFWLLMHADSKDLARIRAVADYIYETVEAERALFSG 295 V ++RTF+L+ H D +DLAR+RA AD+I V RA F G Sbjct: 271 VSLTRTFYLVTHTDMRDLARVRAAADFIASEVGQARARFLG 311 >ref|YP_001831758.1| LysR family transcriptional regulator [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB94269.1| transcriptional regulator, LysR family [Beijerinckia indica subsp. indica ATCC 9039] Length = 301 Score = 291 bits (746), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 148/271 (54%), Positives = 190/271 (70%) Query: 23 KQLGVDHATVIRRVDRLERHLSAKLFDRRKTGYLLTEAGQRVADSAEAMESTIVANQEAV 82 + LGVDH T+ RR+ LE L KLF+R +GY LT AG R+ SAE MES + Q + Sbjct: 26 RTLGVDHTTLSRRIAGLEEALKVKLFERHPSGYRLTNAGDRLLLSAETMESIALTTQSQI 85 Query: 83 GGSRAHLTGTVRIGAPDGFGSHFLASRLVKFAERYPDLDLQLVATARLFSLSKREADIAI 142 GG +TG VRIGAP+GFGS+FLASR+ ++P L++QLVA RLFSLSKREADIAI Sbjct: 86 GGEDLAVTGAVRIGAPEGFGSNFLASRIAALCHQHPQLEIQLVAMPRLFSLSKREADIAI 145 Query: 143 SLTMPKEGRIVGRKLLDYTLGLYAAPAYLAQAPVIAARADLPRHRFVGYIEELLFTPELD 202 SL P+EGR+V RKL DY L LYAAPAYLA P I + DL RF+GYI++L+++ ELD Sbjct: 146 SLAPPREGRLVARKLTDYRLRLYAAPAYLATLPPIKSIEDLRDCRFIGYIDDLIYSQELD 205 Query: 203 YLPQVSPKISAKFRSANLIAQLNATIAGFGIAVLPHFMATAHPELRPVLPDEVRISRTFW 262 YL +++ +S + +SANLIAQLNA I G GI VLP F+A L PVLP +V + R+FW Sbjct: 206 YLGEIASFLSPQLKSANLIAQLNAAITGTGICVLPDFIARGCEGLVPVLPSQVSLMRSFW 265 Query: 263 LLMHADSKDLARIRAVADYIYETVEAERALF 293 L+ HAD + LARI+ V+ +I V+ +ALF Sbjct: 266 LVTHADLRGLARIKTVSAFISNEVKTAQALF 296 >ref|YP_001417095.1| LysR family transcriptional regulator [Xanthobacter autotrophicus Py2] gb|ABS67438.1| transcriptional regulator, LysR family [Xanthobacter autotrophicus Py2] Length = 307 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 150/275 (54%), Positives = 196/275 (71%), Gaps = 5/275 (1%) Query: 24 QLGVDHATVIRRVDRLERHLSAKLFDRRKTGYLLTEAGQRVADSAEAMESTIVANQEAVG 83 +L V+H+TV RR+ LE L AKLFDRR GY LT AG+R+ +AE ME+ +A Q +G Sbjct: 29 RLKVEHSTVSRRIGALEEALGAKLFDRRPHGYGLTAAGERLMAAAEGMETLALAAQGEIG 88 Query: 84 GSRAHLTGTVRIGAPDGFGSHFLASRLVKFAERYPDLDLQLVATARLFSLSKREADIAIS 143 G+ + GTVRIGAPDGFG+ FLA R+ A+ +P+LD+QL+A RLFSLSKREADIAIS Sbjct: 89 GADLGVAGTVRIGAPDGFGTFFLAPRISALADLHPELDIQLLAMPRLFSLSKREADIAIS 148 Query: 144 LTMPKEGRIVGRKLLDYTLGLYAAPAYLAQAPVIAARADLPRHRFVGYIEELLFTPELDY 203 L+ PKEGR+ RKL DY LGLYA+ AYL + I +RA L RH F+GY+++L++ PELDY Sbjct: 149 LSRPKEGRLHARKLTDYRLGLYASRAYLERHGPIESRAGLQRHPFIGYVDDLIYAPELDY 208 Query: 204 LPQVSPKISAKFRSANLIAQLNATIAGFGIAVLPHFMATA----HPE-LRPVLPDEVRIS 258 +P V+ I + +S++L+AQL AT AG G+ VLP FMA P L P+LP +V ++ Sbjct: 209 VPLVAKDIRVRLKSSSLVAQLTATQAGAGVCVLPCFMADLFAGDRPNALVPILPGDVGLT 268 Query: 259 RTFWLLMHADSKDLARIRAVADYIYETVEAERALF 293 RTFWLL H D++DLARIR AD+I V+A R F Sbjct: 269 RTFWLLTHTDTRDLARIRVAADFIAGVVQAARGQF 303