BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0206.0003.p (265 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772600.1| hypothetical protein blr5960 [Bradyrhizobium ja... 233 3e-59 ref|YP_429858.1| hypothetical protein Moth_1000 [Moorella thermo... 70 2e-10 ref|YP_004546307.1| major facilitator superfamily protein [Desul... 67 4e-09 ref|YP_002882487.1| major facilitator superfamily protein [Beute... 66 5e-09 ref|YP_591455.1| major facilitator transporter [Candidatus Korib... 66 6e-09 >ref|NP_772600.1| hypothetical protein blr5960 [Bradyrhizobium japonicum USDA 110] dbj|BAC51225.1| blr5960 [Bradyrhizobium japonicum USDA 110] Length = 383 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 128/179 (71%), Positives = 142/179 (79%), Gaps = 6/179 (3%) Query: 38 VLGWYIMVETGSVLLLTVLASLQYVGTLVAPVVGMIGDRMGHRDLLAVMRFAYTALAGTI 97 +LGWYI+VETGSVLLLT+LASLQYVGTLVAPV+GMIGDRMGHRDLL V+R YTALA TI Sbjct: 1 MLGWYILVETGSVLLLTILASLQYVGTLVAPVLGMIGDRMGHRDLLVVLRLTYTALASTI 60 Query: 98 MTLALTGHLAPLNVMIIVAIMGVIRPSDLGVRGALLADIMPPEQLVGAISLARTTQDSAR 157 M LALTG LAPLNVMIIVAIMG+IR SDLG+R ALLADIMP +QLVGAI L+RTTQDSAR Sbjct: 61 MVLALTGRLAPLNVMIIVAIMGLIRSSDLGIRSALLADIMPAKQLVGAIGLSRTTQDSAR 120 Query: 158 IAGALTGAGLFAALGIGYVYVRDPREXRMA----RPISRPTRRVQSCC--ATSRRASSM 210 IAGALTGAGLFA LGIG VY +A ++RP R V + A SR S + Sbjct: 121 IAGALTGAGLFAVLGIGLVYAAVASLYLVAAILMSCLTRPERTVATMDLPANSRAVSKL 179 >ref|YP_429858.1| hypothetical protein Moth_1000 [Moorella thermoacetica ATCC 39073] gb|ABC19315.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 418 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 89/165 (53%), Gaps = 2/165 (1%) Query: 2 SETTRTSALAPFRIRSYRFQWPSDLLTSWAFEVETLVLGWYIMVETGSVLLLTVLASLQY 61 + R ALA + R++R W L++ ++ + GW ++ T S LL +++++Q+ Sbjct: 9 KKAGRFQALAALKHRNFRLFWSGQLISLIGTWMQNMAQGWLVLQLTNSPFLLGLVSAIQF 68 Query: 62 VGTLV-APVVGMIGDRMGHRDLLAVMRFAYTALAGTIMTLALTGHLAPLNVMIIVAIMGV 120 LV A V G++ DR+ R LL + + LA T+ L LTG + V+I+ ++G+ Sbjct: 69 TPLLVLALVAGVVADRVPKRRLLIFTQSSLMLLAFTLGILTLTGAIRYWQVLILAGLLGM 128 Query: 121 IRPSDLGVRGALLADIMPPEQLVGAISLARTTQDSARIAG-ALTG 164 + D+ R A + +++ L+ AI+L + ++ARI G AL G Sbjct: 129 VNTFDMPARQAFVVEMVGKGDLMNAIALNSSIFNAARIVGPALAG 173 >ref|YP_004546307.1| major facilitator superfamily protein [Desulfotomaculum ruminis DSM 2154] gb|AEG61021.1| major facilitator superfamily MFS_1 [Desulfotomaculum ruminis DSM 2154] Length = 412 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 5/166 (3%) Query: 11 APF----RIRSYRFQWPSDLLTSWAFEVETLVLGWYIMVETGSVLLLTVLASLQYVGTLV 66 APF R R++R + +++ F ++ + L W ++ T S LL ++ +Q+V L Sbjct: 11 APFWAALRHRNFRLFYCGQMISLIGFWMQNMALSWVVLELTNSAFLLGLVTFVQFVPNLA 70 Query: 67 APVV-GMIGDRMGHRDLLAVMRFAYTALAGTIMTLALTGHLAPLNVMIIVAIMGVIRPSD 125 + G+I DR+ R L+ + + + LA + L+ TG L +++++ A+MG+ + D Sbjct: 71 FSLFAGVIADRVPRRPLIIITQMMFMLLAVILTALSFTGLLQYWHIVLLSALMGLFQALD 130 Query: 126 LGVRGALLADIMPPEQLVGAISLARTTQDSARIAGALTGAGLFAAL 171 + R + L ++ E L AI+L T ++AR+ G G + A L Sbjct: 131 IPARQSFLVQMVGREDLTNAIALNSTMFNTARVVGPALGGIVLAYL 176 >ref|YP_002882487.1| major facilitator superfamily protein [Beutenbergia cavernae DSM 12333] gb|ACQ80725.1| major facilitator superfamily MFS_1 [Beutenbergia cavernae DSM 12333] Length = 494 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 7/177 (3%) Query: 8 SALAPFRIRSYRFQWPSDLLTSWAFEVETLVLGWYIMVETGSVLLLTVLASLQYVGTLVA 67 SAL ++R+YR S LLT+ ++ + W I+ TGSV ++ + +LQ L+ Sbjct: 58 SALDSLKVRNYRLYVISQLLTNPCGWMQRVAQDWLILSLTGSVAMVGLTVTLQLGPMLLF 117 Query: 68 PV-VGMIGDRMGHRDLLAVMR--FAYTALAGTIMTLALTGHLAPLNVMIIVAIMGVIRPS 124 + G+I DR R +L + + FA +AL ++TL TGH+ P ++++ +G+ Sbjct: 118 GLWGGVIADRYNKRVILMITQSLFALSALVLGVLTL--TGHIQPWHILVSAGFLGLATVV 175 Query: 125 DLGVRGALLADIMPPEQLVGAISLARTTQDSARIAG-ALTGAGLFAALGIGYVYVRD 180 D R A + ++ PE L AIS+ T +AG AL G + AA+G G+ +V + Sbjct: 176 DNPARQAFVVEVAGPEHLRNAISINSTVFQLGGLAGPALAGVAI-AAVGEGWAFVVN 231 >ref|YP_591455.1| major facilitator transporter [Candidatus Koribacter versatilis Ellin345] gb|ABF41381.1| major facilitator superfamily (MFS) transporter [Candidatus Koribacter versatilis Ellin345] Length = 474 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 1/178 (0%) Query: 1 LSETTRTSALAPFRIRSYRFQWPSDLLTSWAFEVETLVLGWYIMVETGSVLLL-TVLASL 59 + ++ + L ++R+++ + L++ ++ + W I TGS L L TV Sbjct: 28 IQKSKFLNRLPALKVRNFQLFFAGQLISLIGTWMDNVAEAWLIYRLTGSSLKLGTVGFCS 87 Query: 60 QYVGTLVAPVVGMIGDRMGHRDLLAVMRFAYTALAGTIMTLALTGHLAPLNVMIIVAIMG 119 Q L AP+ G++ DR ++ + LAG + L LT + +V ++ A+MG Sbjct: 88 QIPVFLFAPLGGIVADRYNRHKIIIATQATSMVLAGILAILTLTHRVQVWHVFLLAALMG 147 Query: 120 VIRPSDLGVRGALLADIMPPEQLVGAISLARTTQDSARIAGALTGAGLFAALGIGYVY 177 V+ D+ R A L+D++ E L+ AI+L + + ARI G L A++G G+ + Sbjct: 148 VVNAFDIPARQAFLSDMVGRENLMNAIALNSSMFNGARIVGPAVAGILVASIGEGWCF 205