BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0205.0017.p (286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770474.1| hypothetical protein bll3834 [Bradyrhizobium ja... 461 e-128 ref|YP_001236820.1| hypothetical protein BBta_0646 [Bradyrhizobi... 457 e-127 ref|YP_533355.1| hypothetical protein RPC_3496 [Rhodopseudomonas... 454 e-126 ref|YP_001208720.1| hypothetical protein BRADO6915 [Bradyrhizobi... 452 e-125 ref|YP_004677982.1| hypothetical protein HYPMC_4209 [Hyphomicrob... 424 e-117 >ref|NP_770474.1| hypothetical protein bll3834 [Bradyrhizobium japonicum USDA 110] dbj|BAC49099.1| bll3834 [Bradyrhizobium japonicum USDA 110] Length = 417 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 228/279 (81%), Positives = 244/279 (87%), Gaps = 2/279 (0%) Query: 1 VAKVDSAAVQDGFELYLHGFFVTDDGKWTVVQQGMNGDKRQARRYHWHSEGLRSFVDEPH 60 VAKVDSAAVQDGF+LYLHGFFVT D KWTVVQQGMNGDKRQARRYHWHSE L+SFVD PH Sbjct: 130 VAKVDSAAVQDGFDLYLHGFFVTADAKWTVVQQGMNGDKRQARRYHWHSEALKSFVDAPH 189 Query: 61 SAIDGPTQGEIVNLTDHRAESSRQAQLDLLAALGPDGITREYAELTQSAA--AQPDLLHL 118 SAIDGP QGEIVNLTDHRA+ SR AQL+LL LGPD I E+ LT +A AQ L HL Sbjct: 190 SAIDGPQQGEIVNLTDHRADISRSAQLELLGDLGPDRIVAEFERLTGAAPEPAQAMLPHL 249 Query: 119 IMPAHHDVRSSDVFVRRLHGTLAAAIDRGPLDFPELLLTPGVGARTVQSLAMVAEVVHGT 178 IMPAHHDVR DVF RRLHGTLAAA +RGP+DFPELLLTPGVGARTV+SLAMVAEVVHG Sbjct: 250 IMPAHHDVRPKDVFARRLHGTLAAAAERGPVDFPELLLTPGVGARTVRSLAMVAEVVHGA 309 Query: 179 PYRFRDPARFSLAHGGKDRHPFPVPIKVYDETIRVLKSAVQQARLGRDEEMQALKRLDDQ 238 PYRF DPARFSLAHGGKDRHP+PVPIKVYDETIRVLK A+Q A+LGR+EEMQAL+RLDDQ Sbjct: 310 PYRFNDPARFSLAHGGKDRHPYPVPIKVYDETIRVLKGAIQNAKLGREEEMQALRRLDDQ 369 Query: 239 ARRLERTATGPSFEAFVANERARSPALDGRSVFGWEADL 277 ARRLERTA GPS EA++A ERA SP LDGRSVFGWE DL Sbjct: 370 ARRLERTARGPSVEAYIAGERAASPELDGRSVFGWERDL 408 >ref|YP_001236820.1| hypothetical protein BBta_0646 [Bradyrhizobium sp. BTAi1] gb|ABQ32914.1| hypothetical protein BBta_0646 [Bradyrhizobium sp. BTAi1] Length = 413 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 226/282 (80%), Positives = 242/282 (85%) Query: 1 VAKVDSAAVQDGFELYLHGFFVTDDGKWTVVQQGMNGDKRQARRYHWHSEGLRSFVDEPH 60 VAKVDSAAVQDGF+LYLHGFFVT DG+WTVVQQGMNGD RQARRYHWHS+ L FVD PH Sbjct: 130 VAKVDSAAVQDGFDLYLHGFFVTADGRWTVVQQGMNGDARQARRYHWHSQQLADFVDAPH 189 Query: 61 SAIDGPTQGEIVNLTDHRAESSRQAQLDLLAALGPDGITREYAELTQSAAAQPDLLHLIM 120 SAIDGP QGEIVNLTD RA SR+AQL+LL GPD + E+A L+ AQ L HLIM Sbjct: 190 SAIDGPAQGEIVNLTDRRAAVSRKAQLELLTEFGPDRLVTEFARLSTPEPAQGLLPHLIM 249 Query: 121 PAHHDVRSSDVFVRRLHGTLAAAIDRGPLDFPELLLTPGVGARTVQSLAMVAEVVHGTPY 180 PAHHDVR DVF RRLHGTLAAA +RGP+DFPELLLTPGVGARTV+SLAMVAEVVHG PY Sbjct: 250 PAHHDVRPKDVFARRLHGTLAAAAERGPVDFPELLLTPGVGARTVRSLAMVAEVVHGAPY 309 Query: 181 RFRDPARFSLAHGGKDRHPFPVPIKVYDETIRVLKSAVQQARLGRDEEMQALKRLDDQAR 240 RF DPARFSLAHGGKDRHP+PVPIKVYDETIRVLKSAV QA+LGRDE M ALKRLDDQAR Sbjct: 310 RFTDPARFSLAHGGKDRHPYPVPIKVYDETIRVLKSAVGQAKLGRDEAMSALKRLDDQAR 369 Query: 241 RLERTATGPSFEAFVANERARSPALDGRSVFGWEADLAQRNG 282 RLERTA+GPS +AF+A ERA SP LDGRSVFGWE DL QR G Sbjct: 370 RLERTASGPSLDAFIATERAASPDLDGRSVFGWERDLIQRTG 411 >ref|YP_533355.1| hypothetical protein RPC_3496 [Rhodopseudomonas palustris BisB18] gb|ABD89036.1| protein of unknown function DUF763 [Rhodopseudomonas palustris BisB18] Length = 415 Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust. Identities = 226/278 (81%), Positives = 238/278 (85%) Query: 1 VAKVDSAAVQDGFELYLHGFFVTDDGKWTVVQQGMNGDKRQARRYHWHSEGLRSFVDEPH 60 VAKVDSAAVQDGF+LYLHGFF DG+WTVVQQGMN DKRQARRYHWHSE L SFV+ PH Sbjct: 130 VAKVDSAAVQDGFDLYLHGFFAAADGQWTVVQQGMNADKRQARRYHWHSENLSSFVEAPH 189 Query: 61 SAIDGPTQGEIVNLTDHRAESSRQAQLDLLAALGPDGITREYAELTQSAAAQPDLLHLIM 120 SAIDGP QGEIVNLTD A SSR AQL+LL LGPD I REY LT AQP L HL+M Sbjct: 190 SAIDGPQQGEIVNLTDKLAASSRGAQLELLTELGPDSIVREYTALTTLPPAQPMLPHLVM 249 Query: 121 PAHHDVRSSDVFVRRLHGTLAAAIDRGPLDFPELLLTPGVGARTVQSLAMVAEVVHGTPY 180 PAHH+VR SDVF RRLHGTLAAA +RGP+DFPELLLTPGVGARTVQSLAMVAEVVHG PY Sbjct: 250 PAHHEVRGSDVFTRRLHGTLAAAAERGPVDFPELLLTPGVGARTVQSLAMVAEVVHGAPY 309 Query: 181 RFRDPARFSLAHGGKDRHPFPVPIKVYDETIRVLKSAVQQARLGRDEEMQALKRLDDQAR 240 RF DPARFSLAHGGKDRHP+PVPIKVYDETIRVLKSAVQ+A+LGRDEEMQ L+RLDD AR Sbjct: 310 RFADPARFSLAHGGKDRHPYPVPIKVYDETIRVLKSAVQKAKLGRDEEMQTLRRLDDHAR 369 Query: 241 RLERTATGPSFEAFVANERARSPALDGRSVFGWEADLA 278 RLERTA GP FE FVA ER SPAL GRSVFG E DLA Sbjct: 370 RLERTARGPDFEDFVAAERKASPALGGRSVFGLEEDLA 407 >ref|YP_001208720.1| hypothetical protein BRADO6915 [Bradyrhizobium sp. ORS 278] emb|CAL80505.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 413 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 224/282 (79%), Positives = 238/282 (84%) Query: 1 VAKVDSAAVQDGFELYLHGFFVTDDGKWTVVQQGMNGDKRQARRYHWHSEGLRSFVDEPH 60 VAKVDSAAVQDGF+LYLHGFFVT DGKWTVVQQGMNG+ RQARRYHWHS + FVD PH Sbjct: 130 VAKVDSAAVQDGFDLYLHGFFVTADGKWTVVQQGMNGEARQARRYHWHSPDIADFVDAPH 189 Query: 61 SAIDGPTQGEIVNLTDHRAESSRQAQLDLLAALGPDGITREYAELTQSAAAQPDLLHLIM 120 SAIDGP QGEIVNLTD RA SR AQL+LL LGPD + E+ L+ AQ L HLIM Sbjct: 190 SAIDGPAQGEIVNLTDKRAAPSRSAQLELLTELGPDRLVTEFERLSAPEPAQALLPHLIM 249 Query: 121 PAHHDVRSSDVFVRRLHGTLAAAIDRGPLDFPELLLTPGVGARTVQSLAMVAEVVHGTPY 180 P HHDVR DVF RRLHGTLAAA +RGP+DFPELLLTPGVGARTV+SLAMVAEVVHG PY Sbjct: 250 PDHHDVRPKDVFARRLHGTLAAAAERGPVDFPELLLTPGVGARTVRSLAMVAEVVHGAPY 309 Query: 181 RFRDPARFSLAHGGKDRHPFPVPIKVYDETIRVLKSAVQQARLGRDEEMQALKRLDDQAR 240 RF DPARFSLAHGGKDRHP+PVPIKVYDETIRVLKSAV A+LGRDE M ALKRLDDQAR Sbjct: 310 RFTDPARFSLAHGGKDRHPYPVPIKVYDETIRVLKSAVGNAKLGRDEAMAALKRLDDQAR 369 Query: 241 RLERTATGPSFEAFVANERARSPALDGRSVFGWEADLAQRNG 282 RLERTATGPS +AF+A ERA SP LDGRSVFGWE DL QR G Sbjct: 370 RLERTATGPSLDAFIATERAASPELDGRSVFGWERDLIQRTG 411 >ref|YP_004677982.1| hypothetical protein HYPMC_4209 [Hyphomicrobium sp. MC1] emb|CCB67418.1| conserved protein of unknown function [Hyphomicrobium sp. MC1] Length = 416 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 212/278 (76%), Positives = 236/278 (84%), Gaps = 2/278 (0%) Query: 1 VAKVDSAAVQDGFELYLHGFFVTDDGKWTVVQQGMNGDKRQARRYHWHSEGLRSFVDEPH 60 VAKVDSAAVQDGF+LYLHGFFVT +G+WTVVQQGMNG+KRQARRYHWHS L SFVD+PH Sbjct: 130 VAKVDSAAVQDGFDLYLHGFFVTREGRWTVVQQGMNGEKRQARRYHWHSGALASFVDQPH 189 Query: 61 SAIDGPTQGEIVNLTDHRAESSRQAQLDLLAALGPDGITREY-AELTQSA-AAQPDLLHL 118 +AI+GP QGEI+NLTD RAE SR AQLDLLA LGPD I +E E+ A +AQ L HL Sbjct: 190 AAIEGPQQGEIINLTDRRAEKSRSAQLDLLAHLGPDRIVKELQTEMPPEAPSAQLSLPHL 249 Query: 119 IMPAHHDVRSSDVFVRRLHGTLAAAIDRGPLDFPELLLTPGVGARTVQSLAMVAEVVHGT 178 +MPAHHDVRSSDVF RRLH TLAAA +RGP+DFPELLLTPGVGARTVQSLAMVAEVVHG Sbjct: 250 VMPAHHDVRSSDVFTRRLHATLAAAAERGPVDFPELLLTPGVGARTVQSLAMVAEVVHGA 309 Query: 179 PYRFRDPARFSLAHGGKDRHPFPVPIKVYDETIRVLKSAVQQARLGRDEEMQALKRLDDQ 238 PYRF+DP RFSLA GGKDR PFPVP+KVYDETI VLKSA+Q+A+LG E + ALKRLDDQ Sbjct: 310 PYRFQDPGRFSLALGGKDRQPFPVPVKVYDETITVLKSAMQKAKLGNTEMLAALKRLDDQ 369 Query: 239 ARRLERTATGPSFEAFVANERARSPALDGRSVFGWEAD 276 ARRLE +A GPS EA +A+ERARSP G SVFGWE + Sbjct: 370 ARRLESSARGPSLEAHIAHERARSPDYGGLSVFGWEKE 407