BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0205.0011.p (549 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771153.1| acyl-CoA synthetase [Bradyrhizobium japonicum U... 1007 0.0 ref|YP_001240068.1| acyl-CoA synthetase [Bradyrhizobium sp. BTAi... 1004 0.0 ref|YP_001205823.1| acyl-CoA synthetase [Bradyrhizobium sp. ORS ... 1003 0.0 ref|ZP_08629859.1| putative AMP-binding enzyme [Bradyrhizobiacea... 972 0.0 ref|YP_577264.1| acyl-CoA synthetase [Nitrobacter hamburgensis X... 962 0.0 >ref|NP_771153.1| acyl-CoA synthetase [Bradyrhizobium japonicum USDA 110] dbj|BAC49778.1| blr4513 [Bradyrhizobium japonicum USDA 110] Length = 555 Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/553 (87%), Positives = 513/553 (92%), Gaps = 4/553 (0%) Query: 1 MSAAQNQYSIGLDKTPANYVPLSPLSFLARSAAVYPDHISAVYEGRSFTWKATYERCRRF 60 MS QN Y+IGLDKTPANYVPLSPLSFLARSAAVYPDH+S VYEGRSFTW TYERCRRF Sbjct: 3 MSERQNPYNIGLDKTPANYVPLSPLSFLARSAAVYPDHVSTVYEGRSFTWAQTYERCRRF 62 Query: 61 ASYLAGHGIGHGDTVAAMLPNIPAMNELHFAVPMTGAVLNALNIRLDAASIAFQLDHGGA 120 ASYLAG GIG GDTVAAMLPNIPAMNE+HFAVPMTGAVLNALNIRLDA SIAFQLDHGGA Sbjct: 63 ASYLAGKGIGVGDTVAAMLPNIPAMNEVHFAVPMTGAVLNALNIRLDAPSIAFQLDHGGA 122 Query: 121 RIILVDPEFSNVIAEALSLMKGTRPFVIDVDDAAFAGGKRIGEIEYEAAVAAGDPAFTER 180 RIILVDPEFS+VI +AL+ M G +PFVIDVDD AF GGKRIGEIEYEAAVA GDP FT Sbjct: 123 RIILVDPEFSSVITDALAQMSGPKPFVIDVDDPAFKGGKRIGEIEYEAAVAQGDPDFTAI 182 Query: 181 PPADEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCN 240 PP DEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCN Sbjct: 183 PPKDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCN 242 Query: 241 GWCFPWTIAAAAGVNVCLRKVDPAKIFELIPRHGVTHMCGAPIVYNTLINAPDAPK---- 296 GWCFPWTIAA+AG+NVCLRKV+P KIFELI +HGVTHMCGAPIVYNTLINAPDAPK Sbjct: 243 GWCFPWTIAASAGINVCLRKVEPTKIFELIKQHGVTHMCGAPIVYNTLINAPDAPKETST 302 Query: 297 GGKAKPVVGLIAGAAPPVAVLEGAERIGIKLTHVYGLTEVYGPASVCAEQPGWDELSADV 356 G A+ VVGLIAGAAPPVAVLEGAE IGIKLTHVYGLTEVYGPASVCAEQPGWDEL Sbjct: 303 GNAARRVVGLIAGAAPPVAVLEGAENIGIKLTHVYGLTEVYGPASVCAEQPGWDELPPAE 362 Query: 357 RAQLKRRQGVSYPLQEGVTVLDPETMREVPRDGETIGEVMFRGNIVMKGYLKNEKATQEA 416 RA++KRRQGV YPL+EGVTV++P+TM+EVPRDGETIGEVMFRGNIVMKGYLKNEKAT+EA Sbjct: 363 RARMKRRQGVPYPLEEGVTVINPQTMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATKEA 422 Query: 417 FAGGWFHTGDLGVLDAHGYVIIKDRSKDIIISGGENVSSVEVEDILYKHPAVLFAAVVAK 476 F GGWFHTGDLGVLD HGYVIIKDRSKDIIISGGEN+SSVEVEDILYKHPAVLFAAVVAK Sbjct: 423 FEGGWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAK 482 Query: 477 PDPKWGEVPCAFIELKDGAKATEAEIIAYCREHMSGFKTPKSVVFGVIPKTSTGKIQKFL 536 PDPKWGEVPCAF+ELKDGA ATEAEIIA+CR HMSGFKTPK++VFG IPKTSTGKIQKFL Sbjct: 483 PDPKWGEVPCAFVELKDGASATEAEIIAFCRSHMSGFKTPKAIVFGPIPKTSTGKIQKFL 542 Query: 537 LRNQVGSAKAISA 549 LRN+VGSAKAI+A Sbjct: 543 LRNEVGSAKAITA 555 >ref|YP_001240068.1| acyl-CoA synthetase [Bradyrhizobium sp. BTAi1] gb|ABQ36162.1| putative AMP-binding enzyme [Bradyrhizobium sp. BTAi1] Length = 547 Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust. Identities = 482/546 (88%), Positives = 504/546 (92%) Query: 4 AQNQYSIGLDKTPANYVPLSPLSFLARSAAVYPDHISAVYEGRSFTWKATYERCRRFASY 63 + NQY +GLDK ANYVPL+PLSFLARSAAVYPDH+S VYEGRSFTW+ TYERCRRFASY Sbjct: 2 STNQYQLGLDKNAANYVPLTPLSFLARSAAVYPDHVSTVYEGRSFTWRQTYERCRRFASY 61 Query: 64 LAGHGIGHGDTVAAMLPNIPAMNELHFAVPMTGAVLNALNIRLDAASIAFQLDHGGARII 123 LAG GI GDTVAAMLPNIPAMNE HFAVPMTGAVLN LNIRLDA SIAFQLDHG A+II Sbjct: 62 LAGRGISEGDTVAAMLPNIPAMNEAHFAVPMTGAVLNTLNIRLDAPSIAFQLDHGQAKII 121 Query: 124 LVDPEFSNVIAEALSLMKGTRPFVIDVDDAAFAGGKRIGEIEYEAAVAAGDPAFTERPPA 183 LVDPEFS VI+EAL LM G +PFVIDVDDA++AGG RIGEIEYE AVAAGDP F R PA Sbjct: 122 LVDPEFSGVISEALKLMSGPKPFVIDVDDASYAGGSRIGEIEYEVAVAAGDPGFEPRRPA 181 Query: 184 DEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCNGWC 243 DEWDAIA+SYTSGTTGNPKGVVTHHRGAYLNAVSNILAG LGQHPVYLWTLPMFHCNGWC Sbjct: 182 DEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGGLGQHPVYLWTLPMFHCNGWC 241 Query: 244 FPWTIAAAAGVNVCLRKVDPAKIFELIPRHGVTHMCGAPIVYNTLINAPDAPKGGKAKPV 303 FPWT+AAAAG+NVCLRKVDP KIFELI HGVTHMCGAPIVYN LINAPDAPKG + PV Sbjct: 242 FPWTMAAAAGINVCLRKVDPTKIFELIKTHGVTHMCGAPIVYNVLINAPDAPKGKRETPV 301 Query: 304 VGLIAGAAPPVAVLEGAERIGIKLTHVYGLTEVYGPASVCAEQPGWDELSADVRAQLKRR 363 +GLIAGAAPPVAVLEGAE IGIKLTHVYGLTEVYGPASVCAEQPGWD+L RAQLKRR Sbjct: 302 IGLIAGAAPPVAVLEGAENIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPPAERAQLKRR 361 Query: 364 QGVSYPLQEGVTVLDPETMREVPRDGETIGEVMFRGNIVMKGYLKNEKATQEAFAGGWFH 423 QGV YPLQE VTVL+PETM+EVPRDGETIGEVMFRGNIVMKGYLKNEKATQ+AFAGGWFH Sbjct: 362 QGVPYPLQEAVTVLNPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATQDAFAGGWFH 421 Query: 424 TGDLGVLDAHGYVIIKDRSKDIIISGGENVSSVEVEDILYKHPAVLFAAVVAKPDPKWGE 483 TGDLGVLDAHGYVIIKDRSKDIIISGGEN+SSVEVEDILYKHPAVLFAAVVAKPDPKWGE Sbjct: 422 TGDLGVLDAHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDPKWGE 481 Query: 484 VPCAFIELKDGAKATEAEIIAYCREHMSGFKTPKSVVFGVIPKTSTGKIQKFLLRNQVGS 543 VPCAFIELKDGA+ATEAEIIAYCR HMSGFKTPK VVFG IPKTSTGKIQKFLLRN+V S Sbjct: 482 VPCAFIELKDGAQATEAEIIAYCRSHMSGFKTPKVVVFGPIPKTSTGKIQKFLLRNEVNS 541 Query: 544 AKAISA 549 AKAISA Sbjct: 542 AKAISA 547 >ref|YP_001205823.1| acyl-CoA synthetase [Bradyrhizobium sp. ORS 278] emb|CAL77598.1| putative AMP-binding enzyme [Bradyrhizobium sp. ORS 278] Length = 547 Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/546 (87%), Positives = 505/546 (92%) Query: 4 AQNQYSIGLDKTPANYVPLSPLSFLARSAAVYPDHISAVYEGRSFTWKATYERCRRFASY 63 + NQY +GLDK PANYVPL+PLSFLARSAAVYPDH+S VYEGRSFTW+ TYERCRRFASY Sbjct: 2 STNQYQLGLDKNPANYVPLTPLSFLARSAAVYPDHVSTVYEGRSFTWRQTYERCRRFASY 61 Query: 64 LAGHGIGHGDTVAAMLPNIPAMNELHFAVPMTGAVLNALNIRLDAASIAFQLDHGGARII 123 LAG GIG GDTVAAMLPNIPAMNE HFAVPMTGAVLN LNIRLDA SIAFQLDH A+II Sbjct: 62 LAGRGIGTGDTVAAMLPNIPAMNEAHFAVPMTGAVLNTLNIRLDAPSIAFQLDHAQAKII 121 Query: 124 LVDPEFSNVIAEALSLMKGTRPFVIDVDDAAFAGGKRIGEIEYEAAVAAGDPAFTERPPA 183 LVDPEFS VI+EAL LM G +PFVIDVDDA++AGG RIGEIEYEAAVA GDP+F R P Sbjct: 122 LVDPEFSGVISEALKLMSGAKPFVIDVDDASYAGGSRIGEIEYEAAVATGDPSFEPRRPT 181 Query: 184 DEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCNGWC 243 DEWDAIA+SYTSGTTGNPKGVVTHHRGAYLNAVSNILAG LGQHPVYLWTLPMFHCNGWC Sbjct: 182 DEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGGLGQHPVYLWTLPMFHCNGWC 241 Query: 244 FPWTIAAAAGVNVCLRKVDPAKIFELIPRHGVTHMCGAPIVYNTLINAPDAPKGGKAKPV 303 FPWT+AAAAGVNVCLRKV+P KIFELI HGVTHMCGAPIVYN LINAPDAPKG + +PV Sbjct: 242 FPWTMAAAAGVNVCLRKVEPTKIFELIKTHGVTHMCGAPIVYNVLINAPDAPKGKRDRPV 301 Query: 304 VGLIAGAAPPVAVLEGAERIGIKLTHVYGLTEVYGPASVCAEQPGWDELSADVRAQLKRR 363 VGLIAGAAPPVAVLEGAE IGIKLTHVYGLTEVYGPASVCAEQPGWD+L A RA++KRR Sbjct: 302 VGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAPERARMKRR 361 Query: 364 QGVSYPLQEGVTVLDPETMREVPRDGETIGEVMFRGNIVMKGYLKNEKATQEAFAGGWFH 423 QGV YPLQE VTVL+PETM+EVPRDGETIGEVMFRGNIVMKGYLKNEKATQ+AFAGGWFH Sbjct: 362 QGVPYPLQEAVTVLNPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATQDAFAGGWFH 421 Query: 424 TGDLGVLDAHGYVIIKDRSKDIIISGGENVSSVEVEDILYKHPAVLFAAVVAKPDPKWGE 483 TGDLGVLD HGYVIIKDRSKDIIISGGEN+SSVEVEDILYKHPAVLFAAVVAKPDPKWGE Sbjct: 422 TGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDPKWGE 481 Query: 484 VPCAFIELKDGAKATEAEIIAYCREHMSGFKTPKSVVFGVIPKTSTGKIQKFLLRNQVGS 543 VPCAFIELKDGA+A EAEIIAYCR HMSGFKTPK VVFG IPKTSTGKIQKFLLRN+V S Sbjct: 482 VPCAFIELKDGAQAKEAEIIAYCRSHMSGFKTPKVVVFGPIPKTSTGKIQKFLLRNEVNS 541 Query: 544 AKAISA 549 AKAISA Sbjct: 542 AKAISA 547 >ref|ZP_08629859.1| putative AMP-binding enzyme [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07502.1| putative AMP-binding enzyme [Bradyrhizobiaceae bacterium SG-6C] Length = 548 Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/546 (85%), Positives = 499/546 (91%) Query: 4 AQNQYSIGLDKTPANYVPLSPLSFLARSAAVYPDHISAVYEGRSFTWKATYERCRRFASY 63 +Q QYSIGLDK ANYVPLSPLSFL RSA+VYP+H SAVYEGR+FTW T+ERC+RFAS+ Sbjct: 3 SQGQYSIGLDKNAANYVPLSPLSFLVRSASVYPNHTSAVYEGRTFTWAQTFERCKRFASF 62 Query: 64 LAGHGIGHGDTVAAMLPNIPAMNELHFAVPMTGAVLNALNIRLDAASIAFQLDHGGARII 123 LA GI GDTVAAMLPNIPAMNELHFAVPM G VLNALNIRLDAA+IAFQLDHGGA+II Sbjct: 63 LAARGIRRGDTVAAMLPNIPAMNELHFAVPMAGGVLNALNIRLDAAAIAFQLDHGGAKII 122 Query: 124 LVDPEFSNVIAEALSLMKGTRPFVIDVDDAAFAGGKRIGEIEYEAAVAAGDPAFTERPPA 183 LVDPEFS+VI++A+ MKG +P V+DVDDAAF GGKRIGEIEYEAAVA+GDP F P Sbjct: 123 LVDPEFSSVISDAMGQMKGPKPLVVDVDDAAFDGGKRIGEIEYEAAVASGDPDFAWLTPN 182 Query: 184 DEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCNGWC 243 DEWDAIAL YTSGTTGNPKGVVTH+RGAYLNAVSNILAG LG HP+YLWTLPMFHCNGWC Sbjct: 183 DEWDAIALGYTSGTTGNPKGVVTHYRGAYLNAVSNILAGGLGTHPIYLWTLPMFHCNGWC 242 Query: 244 FPWTIAAAAGVNVCLRKVDPAKIFELIPRHGVTHMCGAPIVYNTLINAPDAPKGGKAKPV 303 FPWTIAA+AGVNVCLRKVDPAKIFELIP+HGVTHMCGAPIVYNTLINAP APKG A PV Sbjct: 243 FPWTIAASAGVNVCLRKVDPAKIFELIPKHGVTHMCGAPIVYNTLINAPGAPKGKAATPV 302 Query: 304 VGLIAGAAPPVAVLEGAERIGIKLTHVYGLTEVYGPASVCAEQPGWDELSADVRAQLKRR 363 VGLIAGAAPPVAVLEGAE IGIKLTHVYGLTEVYGPASVCAEQPGWD+L A+ RAQLKRR Sbjct: 303 VGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAEQRAQLKRR 362 Query: 364 QGVSYPLQEGVTVLDPETMREVPRDGETIGEVMFRGNIVMKGYLKNEKATQEAFAGGWFH 423 QGV YPLQE VTVLDPETM+EVPRDGETIGEVMFRGNIVMKGYLKNE AT+EAF GGWFH Sbjct: 363 QGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEAATKEAFEGGWFH 422 Query: 424 TGDLGVLDAHGYVIIKDRSKDIIISGGENVSSVEVEDILYKHPAVLFAAVVAKPDPKWGE 483 TGDLGVLD GYVIIKDRSKDIIISGGEN+SSVEVED+LYKHPAVLFAAVVAKPDPKWGE Sbjct: 423 TGDLGVLDEFGYVIIKDRSKDIIISGGENISSVEVEDVLYKHPAVLFAAVVAKPDPKWGE 482 Query: 484 VPCAFIELKDGAKATEAEIIAYCREHMSGFKTPKSVVFGVIPKTSTGKIQKFLLRNQVGS 543 VPCAF+ELKDGA ATEAEI+AYC+ + GFK+PK+VVFG IPKTSTGKIQKF LR+QV S Sbjct: 483 VPCAFVELKDGASATEAEILAYCKSVLPGFKSPKAVVFGAIPKTSTGKIQKFALRDQVNS 542 Query: 544 AKAISA 549 AKAISA Sbjct: 543 AKAISA 548 >ref|YP_577264.1| acyl-CoA synthetase [Nitrobacter hamburgensis X14] gb|ABE62804.1| AMP-dependent synthetase and ligase [Nitrobacter hamburgensis X14] Length = 547 Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/545 (84%), Positives = 490/545 (89%) Query: 5 QNQYSIGLDKTPANYVPLSPLSFLARSAAVYPDHISAVYEGRSFTWKATYERCRRFASYL 64 +NQY GLDK AN++PLSPLSFL RSA VYP SAVYEGR FTW TYERCRRFAS+L Sbjct: 3 ENQYHDGLDKNSANFIPLSPLSFLERSAVVYPGLPSAVYEGRVFTWAETYERCRRFASFL 62 Query: 65 AGHGIGHGDTVAAMLPNIPAMNELHFAVPMTGAVLNALNIRLDAASIAFQLDHGGARIIL 124 + G+ GDTVAAMLPNIPAMNE+HFAVPMTGAVLNALNIRL+AAS+AF LDHGGA++IL Sbjct: 63 SSRGVKRGDTVAAMLPNIPAMNEVHFAVPMTGAVLNALNIRLEAASLAFMLDHGGAKVIL 122 Query: 125 VDPEFSNVIAEALSLMKGTRPFVIDVDDAAFAGGKRIGEIEYEAAVAAGDPAFTERPPAD 184 VDPEFS VIAEAL+LM +PFVIDVDDAAF+GG+RIG IEYEAAVAAGDP F P D Sbjct: 123 VDPEFSGVIAEALALMTCPKPFVIDVDDAAFSGGERIGAIEYEAAVAAGDPGFVAVFPQD 182 Query: 185 EWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCNGWCF 244 EWDAIALSYTSGTTGNPKGVVTHHRGAYLNA+SN+LAG LGQHP YLWTLPMFHCNGWCF Sbjct: 183 EWDAIALSYTSGTTGNPKGVVTHHRGAYLNAISNVLAGGLGQHPSYLWTLPMFHCNGWCF 242 Query: 245 PWTIAAAAGVNVCLRKVDPAKIFELIPRHGVTHMCGAPIVYNTLINAPDAPKGGKAKPVV 304 PW IAA AGVNVCLRKVDP +IFELI +HGVTHMCGAPIVYNTLINAP APKG A+P+V Sbjct: 243 PWAIAATAGVNVCLRKVDPVRIFELIQKHGVTHMCGAPIVYNTLINAPGAPKGNAARPIV 302 Query: 305 GLIAGAAPPVAVLEGAERIGIKLTHVYGLTEVYGPASVCAEQPGWDELSADVRAQLKRRQ 364 GLIAGAAPPVAVLEGAE IGIKLTHVYGLTE YGPASVCAEQPGW L AD RAQLKRRQ Sbjct: 303 GLIAGAAPPVAVLEGAESIGIKLTHVYGLTETYGPASVCAEQPGWGALPADQRAQLKRRQ 362 Query: 365 GVSYPLQEGVTVLDPETMREVPRDGETIGEVMFRGNIVMKGYLKNEKATQEAFAGGWFHT 424 GV YPLQE +TVLDPETMREVPRDGETIGEVMFRGNIVMKGYLKNE AT EAFAGGWFHT Sbjct: 363 GVCYPLQEAITVLDPETMREVPRDGETIGEVMFRGNIVMKGYLKNETATNEAFAGGWFHT 422 Query: 425 GDLGVLDAHGYVIIKDRSKDIIISGGENVSSVEVEDILYKHPAVLFAAVVAKPDPKWGEV 484 GDLGVLD GYVIIKDRSKDIIISGGEN+SSVEVEDILYKHPAVL AAVVAKPD KWGEV Sbjct: 423 GDLGVLDEQGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLLAAVVAKPDAKWGEV 482 Query: 485 PCAFIELKDGAKATEAEIIAYCREHMSGFKTPKSVVFGVIPKTSTGKIQKFLLRNQVGSA 544 PCAF+ELKDGA+ATEAEIIA+CRE M GFKTPK+VVFG IPKTSTGKIQKFLLRNQV SA Sbjct: 483 PCAFVELKDGARATEAEIIAHCRERMPGFKTPKAVVFGTIPKTSTGKIQKFLLRNQVNSA 542 Query: 545 KAISA 549 KAISA Sbjct: 543 KAISA 547