BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0205.0007.p (228 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771158.1| thymidylate kinase [Bradyrhizobium japonicum US... 363 1e-98 ref|YP_577269.1| thymidylate kinase [Nitrobacter hamburgensis X1... 342 2e-92 ref|ZP_01046514.1| thymidylate kinase [Nitrobacter sp. Nb-311A] ... 340 7e-92 ref|YP_001205817.1| thymidylate kinase [Bradyrhizobium sp. ORS 2... 340 1e-91 ref|YP_318077.1| thymidylate kinase [Nitrobacter winogradskyi Nb... 329 2e-88 >ref|NP_771158.1| thymidylate kinase [Bradyrhizobium japonicum USDA 110] sp|Q89LM5.1|KTHY_BRAJA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase dbj|BAC49783.1| thymydilate kinase [Bradyrhizobium japonicum USDA 110] Length = 228 Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 173/218 (79%), Positives = 197/218 (90%) Query: 1 MAEAAVQRPSLRGRFITFEGGEGSGKSTQIRKLAERLDAAKLRAIVTREPGGSPGAEIIR 60 M+++AVQR S RGRFITFEGGEG+GKSTQI+KLA+RL AA++R +VTREPGGSPGAEI+R Sbjct: 1 MSDSAVQRSSGRGRFITFEGGEGTGKSTQIKKLADRLKAARMRTLVTREPGGSPGAEIMR 60 Query: 61 HLVLSGMGKLLGPEAETLLFAAARDDHVRTVILPALNQGIWVLCDRFFDSTRAYQGQLGQ 120 HLVLSGMGKLLGPEAETLLFAAARDDHV TVI PAL QGIWVLCDRF DSTRAYQG LG Sbjct: 61 HLVLSGMGKLLGPEAETLLFAAARDDHVHTVIEPALKQGIWVLCDRFADSTRAYQGSLGS 120 Query: 121 VSPELVNAMQRVTIGDLKPDLTFILDVPVEVGLQRAAARRGNATADRFEAEGIKFHQDLR 180 VSP L+NAMQRVTIGDLKPDLT ILD+PVE+GLQRAAARRG+ T DRFE E + FHQ LR Sbjct: 121 VSPGLINAMQRVTIGDLKPDLTIILDLPVEIGLQRAAARRGSGTPDRFEGEQLSFHQGLR 180 Query: 181 DAYRRIAAEDPARCVLIDATADPDTVSARIWAALREHL 218 +AYR+IAA++PARCVLIDA +DPDTV+ R+W+ALR+ L Sbjct: 181 EAYRKIAADEPARCVLIDANSDPDTVAGRVWSALRDRL 218 >ref|YP_577269.1| thymidylate kinase [Nitrobacter hamburgensis X14] sp|Q1QLT8.1|KTHY_NITHX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gb|ABE62809.1| thymidylate kinase [Nitrobacter hamburgensis X14] Length = 230 Score = 342 bits (877), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 174/226 (76%), Positives = 191/226 (84%), Gaps = 3/226 (1%) Query: 1 MAEAAVQRPSLRGRFITFEGGEGSGKSTQIRKLAERLDAAKLRAIVTREPGGSPGAEIIR 60 M EAA + LRGRFITFEGGEGSGKSTQI LAERL+AAKLRAIVTREPGGSPGAEIIR Sbjct: 1 MTEAAPKVGLLRGRFITFEGGEGSGKSTQINILAERLNAAKLRAIVTREPGGSPGAEIIR 60 Query: 61 HLVLSGMGKLLGPEAETLLFAAARDDHVRTVILPALNQGIWVLCDRFFDSTRAYQGQLGQ 120 HLVLSGMGKLLG AETLLFAAARDDHV TVI PAL QGIWVLCDRF DSTRAYQG+LG Sbjct: 61 HLVLSGMGKLLGAYAETLLFAAARDDHVHTVIKPALEQGIWVLCDRFADSTRAYQGRLGD 120 Query: 121 VSPELVNAMQRVTIGDLKPDLTFILDVPVEVGLQRAAARRGNATADRFEAEGIKFHQDLR 180 V P ++NA++RVTIGDLKPDLT ILDVPVE+G+QRAA RRG+ DRFEAE + FHQ LR Sbjct: 121 VLPGVLNALERVTIGDLKPDLTVILDVPVEIGMQRAAVRRGSGAPDRFEAEDVAFHQKLR 180 Query: 181 DAYRRIAAEDPARCVLIDATADPDTVSARIWAALREHLRAALAADS 226 DAYR IAA DP RCV+IDA AD +TV+A +WAALR+ + L ADS Sbjct: 181 DAYRDIAASDPQRCVVIDANADVNTVAAGVWAALRDRV---LVADS 223 >ref|ZP_01046514.1| thymidylate kinase [Nitrobacter sp. Nb-311A] gb|EAQ35604.1| thymidylate kinase [Nitrobacter sp. Nb-311A] Length = 230 Score = 340 bits (873), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 172/218 (78%), Positives = 186/218 (85%) Query: 1 MAEAAVQRPSLRGRFITFEGGEGSGKSTQIRKLAERLDAAKLRAIVTREPGGSPGAEIIR 60 MAEA + RGRFITFEGGEGSGKSTQI+ LAERL AAK AIVTREPGGSPGAEIIR Sbjct: 1 MAEATPKADPQRGRFITFEGGEGSGKSTQIKILAERLLAAKQHAIVTREPGGSPGAEIIR 60 Query: 61 HLVLSGMGKLLGPEAETLLFAAARDDHVRTVILPALNQGIWVLCDRFFDSTRAYQGQLGQ 120 HLVLSG+GKLLG +AETLLFAAARDDHVRTVI PAL QG+WVLCDRF DSTR YQGQLG Sbjct: 61 HLVLSGVGKLLGVDAETLLFAAARDDHVRTVIRPALEQGVWVLCDRFADSTRVYQGQLGN 120 Query: 121 VSPELVNAMQRVTIGDLKPDLTFILDVPVEVGLQRAAARRGNATADRFEAEGIKFHQDLR 180 V P ++NAM+RVTIGDLKPDLT ILDVPVEVGLQRAAARRG+ DRFEAE + FH+ LR Sbjct: 121 VLPGVLNAMERVTIGDLKPDLTVILDVPVEVGLQRAAARRGSGAPDRFEAEDLAFHRKLR 180 Query: 181 DAYRRIAAEDPARCVLIDATADPDTVSARIWAALREHL 218 DAYR IAA DP RCV+IDA D DTV+ARIWAALRE + Sbjct: 181 DAYREIAANDPQRCVVIDADTDLDTVAARIWAALRERM 218 >ref|YP_001205817.1| thymidylate kinase [Bradyrhizobium sp. ORS 278] sp|A4YUL6.1|KTHY_BRASO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase emb|CAL77592.1| thymidylate kinase [Bradyrhizobium sp. ORS 278] Length = 226 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 166/226 (73%), Positives = 194/226 (85%) Query: 1 MAEAAVQRPSLRGRFITFEGGEGSGKSTQIRKLAERLDAAKLRAIVTREPGGSPGAEIIR 60 MA+AA++R RGRF+TFEGGEG+GKSTQI+ LA+RL+ +R ++TREPGGSPGAEI+R Sbjct: 1 MADAALKRGPGRGRFVTFEGGEGAGKSTQIKMLADRLEKDGVRVVLTREPGGSPGAEIMR 60 Query: 61 HLVLSGMGKLLGPEAETLLFAAARDDHVRTVILPALNQGIWVLCDRFFDSTRAYQGQLGQ 120 HLVLSGMGKLLG EAETLLFAAARDDHVR VILPALNQG WVLCDRFFDSTRAYQG G+ Sbjct: 61 HLVLSGMGKLLGAEAETLLFAAARDDHVRNVILPALNQGSWVLCDRFFDSTRAYQGSQGK 120 Query: 121 VSPELVNAMQRVTIGDLKPDLTFILDVPVEVGLQRAAARRGNATADRFEAEGIKFHQDLR 180 V+P+++NAMQRVTIGDLKPDLT ILDVPVEVGLQRA+ARRG+ DRFE+E IKFH+ LR Sbjct: 121 VAPDVLNAMQRVTIGDLKPDLTLILDVPVEVGLQRASARRGSGAPDRFESEDIKFHKGLR 180 Query: 181 DAYRRIAAEDPARCVLIDATADPDTVSARIWAALREHLRAALAADS 226 DA+ +IAA +P RCVLIDATA + VS +W A+RE L A+AA S Sbjct: 181 DAFHKIAATEPRRCVLIDATASAEAVSNIVWDAVRERLFTAVAAAS 226 >ref|YP_318077.1| thymidylate kinase [Nitrobacter winogradskyi Nb-255] sp|Q3SSL6.1|KTHY_NITWN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gb|ABA04725.1| thymidylate kinase [Nitrobacter winogradskyi Nb-255] Length = 230 Score = 329 bits (843), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 177/226 (78%), Positives = 191/226 (84%), Gaps = 3/226 (1%) Query: 1 MAEAAVQRPSLRGRFITFEGGEGSGKSTQIRKLAERLDAAKLRAIVTREPGGSPGAEIIR 60 MA+A + S RGRFITFEGGEGSGKSTQIR LAERL AAKLRAIVTREPGGSPGAEIIR Sbjct: 1 MAQATPKADSQRGRFITFEGGEGSGKSTQIRILAERLQAAKLRAIVTREPGGSPGAEIIR 60 Query: 61 HLVLSGMGKLLGPEAETLLFAAARDDHVRTVILPALNQGIWVLCDRFFDSTRAYQGQLGQ 120 HLVLSG+GKLLG +AETLLFAAARDDHV TVI PAL QGIWVLCDRF DSTR YQGQLG Sbjct: 61 HLVLSGVGKLLGADAETLLFAAARDDHVHTVIKPALEQGIWVLCDRFADSTRVYQGQLGN 120 Query: 121 VSPELVNAMQRVTIGDLKPDLTFILDVPVEVGLQRAAARRGNATADRFEAEGIKFHQDLR 180 V P ++NAM+RVTIGDLKPDLT ILDVPVEVGLQRAAARRG+ DRFEAE I FH+ LR Sbjct: 121 VLPGVLNAMERVTIGDLKPDLTVILDVPVEVGLQRAAARRGSGAPDRFEAEDIAFHRKLR 180 Query: 181 DAYRRIAAEDPARCVLIDATADPDTVSARIWAALREHLRAALAADS 226 DAYR IAA DP RCV+IDA AD D V+AR+WAAL + AL AD+ Sbjct: 181 DAYRAIAASDPQRCVVIDADADLDAVAARVWAALHDR---ALTADA 223