BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0205.0004.p (286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771161.1| rare lipoprotein A [Bradyrhizobium japonicum US... 437 e-120 ref|YP_001240078.1| hypothetical protein BBta_4106 [Bradyrhizobi... 431 e-119 ref|YP_001205812.1| rare lipoprotein A family protein (rlpA) [Br... 415 e-114 ref|YP_781779.1| rare lipoprotein A [Rhodopseudomonas palustris ... 414 e-114 ref|YP_577271.1| rare lipoprotein A [Nitrobacter hamburgensis X1... 412 e-113 >ref|NP_771161.1| rare lipoprotein A [Bradyrhizobium japonicum USDA 110] dbj|BAC49786.1| bll4521 [Bradyrhizobium japonicum USDA 110] Length = 376 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 230/267 (86%), Positives = 246/267 (92%), Gaps = 3/267 (1%) Query: 19 NCASSNKFASRVDPKYGVSSSPRVVALGDPVPKGGGTYRIGKPYVVAGRTYVPEENANYR 78 NCASSNKFASRVDPKYGVSSSPRVVALGDPVPKGGGTYR+GKPYVVAGRTYVPEE+ NYR Sbjct: 92 NCASSNKFASRVDPKYGVSSSPRVVALGDPVPKGGGTYRVGKPYVVAGRTYVPEEDVNYR 151 Query: 79 AEGMASWYGDDFHGRLTANGEVFDMGSLTAAHPTLPMPSYARVTNLSNGRSLVVRVNDRG 138 AEGMASWYGDDFHGRLTANGEVFDM SLTAAHPTLPMPSYARVTN+SNG+SL+VRVNDRG Sbjct: 152 AEGMASWYGDDFHGRLTANGEVFDMASLTAAHPTLPMPSYARVTNISNGKSLIVRVNDRG 211 Query: 139 PYHGNRLIDVSNKAAELLEFKGNGVARVRVEYVGRAPLEGSDDRQLMATLRTGTPAPSPS 198 PYHGNRLIDVSNKAAELLEFKGNGVA+VRVEYVGRAPLEGSDDRQLMATLRTG PAPSPS Sbjct: 212 PYHGNRLIDVSNKAAELLEFKGNGVAKVRVEYVGRAPLEGSDDRQLMATLRTGIPAPSPS 271 Query: 199 MVRVASARPFVPEM-SSSSGRIRGDVPLPEGRPYSL--TQADYASVSATSEMSASSRSHR 255 MVRVASARPFVPE+ SS+ G IRG+VP+PEGRPYSL T AD AS++A+SEMSASSRS Sbjct: 272 MVRVASARPFVPELPSSNRGAIRGEVPMPEGRPYSLGNTSADMASLNASSEMSASSRSRG 331 Query: 256 RALNNPREVSYEGDARYAASPSPAAAY 282 R L N R VSY+ D RYA +P+AAY Sbjct: 332 RPLQNARAVSYDEDGRYATESAPSAAY 358 >ref|YP_001240078.1| hypothetical protein BBta_4106 [Bradyrhizobium sp. BTAi1] gb|ABQ36172.1| hypothetical protein BBta_4106 [Bradyrhizobium sp. BTAi1] Length = 283 Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust. Identities = 212/263 (80%), Positives = 238/263 (90%), Gaps = 5/263 (1%) Query: 16 VLANCASSNKFASRVDPKYGVSSSPRVVALGDPVPKGGGTYRIGKPYVVAGRTYVPEENA 75 ++ANCASSNKFAS+VDPKYGVSSSPRVV G+PVPKGGG YR+GKPY VAG+TYVPEE+ Sbjct: 1 MVANCASSNKFASKVDPKYGVSSSPRVVGFGEPVPKGGGVYRVGKPYTVAGKTYVPEEDT 60 Query: 76 NYRAEGMASWYGDDFHGRLTANGEVFDMGSLTAAHPTLPMPSYARVTNLSNGRSLVVRVN 135 NYRAEGMASWYGDDFHGRLTANGEVFDM SLTAAHPTLPMPSYARVTNL+NG+SL+VRVN Sbjct: 61 NYRAEGMASWYGDDFHGRLTANGEVFDMASLTAAHPTLPMPSYARVTNLANGKSLIVRVN 120 Query: 136 DRGPYHGNRLIDVSNKAAELLEFKGNGVARVRVEYVGRAPLEGSDDRQLMATLRTGTPAP 195 DRGPYH NRLIDVSNKAA+LLEFKG GVARVRVEYVGRAPLEGSDD QLMATLRTG PAP Sbjct: 121 DRGPYHANRLIDVSNKAADLLEFKGTGVARVRVEYVGRAPLEGSDDVQLMATLRTGIPAP 180 Query: 196 SPSMVRVASARPFVPEMSSSSGR-IRGDVPLPEGRPYSLTQ--ADYASVSATSEMSASSR 252 +PS+VRVASA+PFVP++ +GR IRG+VPLPEGRPY+L AD AS++ATSEMSASSR Sbjct: 181 APSLVRVASAKPFVPDV--GAGRPIRGEVPLPEGRPYTLGNGSADLASIAATSEMSASSR 238 Query: 253 SHRRALNNPREVSYEGDARYAAS 275 + R+L+NPR VSY+ + RYAA Sbjct: 239 TRGRSLDNPRAVSYDQNGRYAAQ 261 >ref|YP_001205812.1| rare lipoprotein A family protein (rlpA) [Bradyrhizobium sp. ORS 278] emb|CAL77587.1| conserved hypothetical protein; possible RARE lipoprotein A family protein (rlpA) [Bradyrhizobium sp. ORS 278] Length = 283 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 210/260 (80%), Positives = 234/260 (90%), Gaps = 5/260 (1%) Query: 16 VLANCASSNKFASRVDPKYGVSSSPRVVALGDPVPKGGGTYRIGKPYVVAGRTYVPEENA 75 ++ANCASSNKFAS+VDPKYGVSSSPRVV G+PVPKGGG YRIGKPY VAG+TYVPEE+ Sbjct: 1 MVANCASSNKFASKVDPKYGVSSSPRVVGFGEPVPKGGGVYRIGKPYTVAGKTYVPEEDV 60 Query: 76 NYRAEGMASWYGDDFHGRLTANGEVFDMGSLTAAHPTLPMPSYARVTNLSNGRSLVVRVN 135 NYRAEGMASWYGDDFHGRLTANGEVFDM SLTAAHPTLPMPSYARVTNL+NG+SL+VR+N Sbjct: 61 NYRAEGMASWYGDDFHGRLTANGEVFDMTSLTAAHPTLPMPSYARVTNLANGKSLIVRIN 120 Query: 136 DRGPYHGNRLIDVSNKAAELLEFKGNGVARVRVEYVGRAPLEGSDDRQLMATLRTGTPAP 195 DRGPYH NRLIDVSNKAA+LLEFKG+GVARVRVEYVGRAPLEGSDD QL+ATLRTG PAP Sbjct: 121 DRGPYHANRLIDVSNKAADLLEFKGSGVARVRVEYVGRAPLEGSDDTQLIATLRTGIPAP 180 Query: 196 SPSMVRVASARPFVPEMSSSSGR-IRGDVPLPEGRPYSL--TQADYASVSATSEMSASSR 252 +PS+VRVASA+PFVPE+ SGR IRG++PLPEGRPY+L T A AS+ A SEMSASSR Sbjct: 181 APSLVRVASAKPFVPEV--GSGRPIRGEIPLPEGRPYTLGDTSAAMASMGAASEMSASSR 238 Query: 253 SHRRALNNPREVSYEGDARY 272 + R L+NPR VSY+ D RY Sbjct: 239 TRGRILDNPRAVSYDQDGRY 258 >ref|YP_781779.1| rare lipoprotein A [Rhodopseudomonas palustris BisA53] gb|ABJ06799.1| rare lipoprotein A [Rhodopseudomonas palustris BisA53] Length = 310 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 207/267 (77%), Positives = 237/267 (88%), Gaps = 7/267 (2%) Query: 11 VATCLVLANCASSNKFASRVDPKYGVSSSPRVVALGDPVPKGGGTYRIGKPYVVAGRTYV 70 + CL+LANCA+S KFAS+VDPKYGVS+SPRVV G+PVPKGGGTYR+GKPY+VAGR YV Sbjct: 19 LGACLMLANCAASGKFASKVDPKYGVSASPRVVEPGEPVPKGGGTYRVGKPYMVAGRMYV 78 Query: 71 PEENANYRAEGMASWYGDDFHGRLTANGEVFDMGSLTAAHPTLPMPSYARVTNLSNGRSL 130 PEEN NYRAEG+ASWYGDDFHGRLTANGEVFDM SLTAAHPTLP+PSYARVTN+ NG+S+ Sbjct: 79 PEENVNYRAEGLASWYGDDFHGRLTANGEVFDMESLTAAHPTLPIPSYARVTNIKNGKSV 138 Query: 131 VVRVNDRGPYHGNRLIDVSNKAAELLEFKGNGVARVRVEYVGRAPLEGSDDRQLMATLRT 190 +VRVNDRGPYHGNRL+DVSN+AAELLEFK +GVA+VRVEYVGRAPLEGSDDRQLMATLR+ Sbjct: 139 IVRVNDRGPYHGNRLMDVSNRAAELLEFKHHGVAKVRVEYVGRAPLEGSDDRQLMATLRS 198 Query: 191 GTPAPSPSMVRVASARPFVPEMSSSSGRI-RGDVPLPEGRPYSL--TQADYASVSATSEM 247 G PAPSPS+VRVAS + FVP++SSS RI RGDVP+PEGRPYSL + AD AS++ATSEM Sbjct: 199 GEPAPSPSLVRVASTQSFVPQISSS--RIARGDVPMPEGRPYSLGNSSADVASINATSEM 256 Query: 248 SA--SSRSHRRALNNPREVSYEGDARY 272 SA S+RS RA+ N R VSY+ D Y Sbjct: 257 SASRSARSAGRAMENHRAVSYDHDGSY 283 >ref|YP_577271.1| rare lipoprotein A [Nitrobacter hamburgensis X14] gb|ABE62811.1| rare lipoprotein A [Nitrobacter hamburgensis X14] Length = 312 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 206/259 (79%), Positives = 227/259 (87%), Gaps = 5/259 (1%) Query: 13 TCLVLANCASSNKFASRVDPKYGVSSSPRVVALGDPVPKGGGTYRIGKPYVVAGRTYVPE 72 CL+LA+C SS KF SR+DPKYGVSSSPRVV G+PVPKGGGTYR+GKPY VAGR YVPE Sbjct: 21 VCLMLASCGSSGKF-SRIDPKYGVSSSPRVVGFGEPVPKGGGTYRVGKPYTVAGRVYVPE 79 Query: 73 ENANYRAEGMASWYGDDFHGRLTANGEVFDMGSLTAAHPTLPMPSYARVTNLSNGRSLVV 132 EN +YRAEG+ASWYGD FHGRLTANGEVFDM SL+AAHPTLP+P YARVTNLSNGRSL+V Sbjct: 80 ENTHYRAEGLASWYGDAFHGRLTANGEVFDMASLSAAHPTLPLPCYARVTNLSNGRSLIV 139 Query: 133 RVNDRGPYHGNRLIDVSNKAAELLEFKGNGVARVRVEYVGRAPLEGSDDRQLMATLRTGT 192 RVNDRGPYHGNRLIDVSNKAAELLEFKG GVARVRVEYVGRAPLEGSDDRQLMATLRTG Sbjct: 140 RVNDRGPYHGNRLIDVSNKAAELLEFKGRGVARVRVEYVGRAPLEGSDDRQLMATLRTGE 199 Query: 193 PAPSPSMVRVASARPFVPEMSSSSGRIRGDVPLPEGRPYSL--TQADYASVSATSEMSAS 250 PAPSPS VR+ASARPFVPE++ S IRGDVP P+GRPY+L T D S++ATSEMSAS Sbjct: 200 PAPSPSTVRIASARPFVPELAPSGRAIRGDVPTPDGRPYALGHTSVDADSINATSEMSAS 259 Query: 251 SRS--HRRALNNPREVSYE 267 SR+ H + +NPR VSY+ Sbjct: 260 SRARPHPQMRDNPRAVSYD 278