BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0204.0020.p (193 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08629358.1| TRAP dicarboxylate transporter [Bradyrhizobia... 250 7e-65 ref|ZP_07026794.1| Tripartite ATP-independent periplasmic transp... 236 1e-60 ref|YP_004632484.1| TRAP transport system, small permease [Oligo... 232 2e-59 ref|YP_002289510.1| tripartite ATP-independent periplasmic trans... 231 4e-59 ref|YP_001525439.1| glutamate transporter [Azorhizobium caulinod... 228 3e-58 >ref|ZP_08629358.1| TRAP dicarboxylate transporter [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07851.1| TRAP dicarboxylate transporter [Bradyrhizobiaceae bacterium SG-6C] Length = 198 Score = 250 bits (639), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 123/187 (65%), Positives = 156/187 (83%), Gaps = 1/187 (0%) Query: 1 LQSLLKLSRGIDAFTRWTGKRLAWLILLAVIISAINAIVRKTFDVSSNSWLELQWVLFSI 60 +QSLLKLSR IDAF + G+ ++WLI+LAV+ISA+NA+VRK FDVSSN++LELQWVLFS+ Sbjct: 1 MQSLLKLSRAIDAFNTFVGRWVSWLIVLAVMISAVNAVVRKVFDVSSNAYLELQWVLFSV 60 Query: 61 VFLLCSPWTLLDNEHIRIDIVNNLLPKRVRNVIDVIGHAFFLLPLCVVMIITGGPFFWRS 120 VFLLCSPWTLL+ EHI+IDI+N+ LP +VR+ ID+IGH FL+P CV++I T PFF S Sbjct: 61 VFLLCSPWTLLNGEHIKIDIINHTLPLKVRSWIDMIGHILFLVPFCVILIWTSIPFFIVS 120 Query: 121 YQINEQSGNAGGLPQWPAKSLIIIAFSFLFVQGISELIKRIAVMRGLISDPHASQVTAIE 180 YQ NEQS +AGGLPQWPAKSLI+I + L VQG+SE+IKR AVM+GL+ DP+A ++A E Sbjct: 121 YQQNEQSFSAGGLPQWPAKSLIMIGLTLLLVQGVSEIIKRAAVMKGLLPDPNAHAMSAHE 180 Query: 181 -AEVEHL 186 AE+E L Sbjct: 181 IAELEAL 187 >ref|ZP_07026794.1| Tripartite ATP-independent periplasmic transporter DctQ component [Afipia sp. 1NLS2] gb|EFI51637.1| Tripartite ATP-independent periplasmic transporter DctQ component [Afipia sp. 1NLS2] Length = 198 Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 114/172 (66%), Positives = 144/172 (83%) Query: 1 LQSLLKLSRGIDAFTRWTGKRLAWLILLAVIISAINAIVRKTFDVSSNSWLELQWVLFSI 60 +Q+LLKLSRGID+FT G+ L+WLI++AVIIS+ NA +RK FDVSSN++LELQWVLF + Sbjct: 1 MQTLLKLSRGIDSFTTVIGRWLSWLIVIAVIISSANATIRKIFDVSSNAYLELQWVLFGV 60 Query: 61 VFLLCSPWTLLDNEHIRIDIVNNLLPKRVRNVIDVIGHAFFLLPLCVVMIITGGPFFWRS 120 VFLLCSPW LL+ +HI+IDIVN+ LP +VR+ ID+IGH FFLLP C+V++ T PFF S Sbjct: 61 VFLLCSPWALLNGDHIKIDIVNHHLPLKVRSWIDLIGHVFFLLPFCIVLLWTSIPFFLVS 120 Query: 121 YQINEQSGNAGGLPQWPAKSLIIIAFSFLFVQGISELIKRIAVMRGLISDPH 172 Y NEQS +AGGLPQWPAKSL++IA + L VQ ISE+IKR+AVMRGL+ DP+ Sbjct: 121 YHQNEQSFSAGGLPQWPAKSLLVIASALLLVQAISEIIKRVAVMRGLLPDPN 172 >ref|YP_004632484.1| TRAP transport system, small permease [Oligotropha carboxidovorans OM5] gb|AEI02667.1| TRAP transport system, small permease protein [Oligotropha carboxidovorans OM4] gb|AEI06243.1| TRAP transport system, small permease protein [Oligotropha carboxidovorans OM5] Length = 198 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 121/193 (62%), Positives = 152/193 (78%), Gaps = 3/193 (1%) Query: 1 LQSLLKLSRGIDAFTRWTGKRLAWLILLAVIISAINAIVRKTFDVSSNSWLELQWVLFSI 60 +Q+LLKLSRGIDA T G+ L+WLIL+AVIIS+ NA +RK FDVSSN++LELQW+LF Sbjct: 1 MQALLKLSRGIDAMTTTIGRWLSWLILIAVIISSANATIRKIFDVSSNAYLELQWMLFGA 60 Query: 61 VFLLCSPWTLLDNEHIRIDIVNNLLPKRVRNVIDVIGHAFFLLPLCVVMIITGGPFFWRS 120 VFLLCSPWTLL +EHI+IDIVN+ LP +VR+ ID+IGH FFL+P C+V++ T PFF S Sbjct: 61 VFLLCSPWTLLKDEHIKIDIVNHHLPLKVRSWIDLIGHVFFLMPFCIVVLWTSIPFFLVS 120 Query: 121 YQINEQSGNAGGLPQWPAKSLIIIAFSFLFVQGISELIKRIAVMRGLISDPHASQVTAIE 180 Y NEQS NAGGLPQWPAKSL+++ + L VQ ISE+IKR+AVM+GL+ DP+ ++A E Sbjct: 121 YHQNEQSFNAGGLPQWPAKSLVVLGAALLLVQAISEIIKRVAVMQGLLPDPNKLALSAHE 180 Query: 181 A---EVEHLVEAI 190 E E L EAI Sbjct: 181 QAALEAERLAEAI 193 >ref|YP_002289510.1| tripartite ATP-independent periplasmic transporter [Oligotropha carboxidovorans OM5] gb|ACI93645.1| tripartite ATP-independent periplasmic transporter [Oligotropha carboxidovorans OM5] Length = 225 Score = 231 bits (589), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 122/195 (62%), Positives = 152/195 (77%), Gaps = 3/195 (1%) Query: 1 LQSLLKLSRGIDAFTRWTGKRLAWLILLAVIISAINAIVRKTFDVSSNSWLELQWVLFSI 60 LQ+LLKLSRGIDA T G+ L+WLIL+AVIIS+ NA +RK FDVSSN++LELQW+LF Sbjct: 28 LQALLKLSRGIDAMTTTIGRWLSWLILIAVIISSANATIRKIFDVSSNAYLELQWMLFGA 87 Query: 61 VFLLCSPWTLLDNEHIRIDIVNNLLPKRVRNVIDVIGHAFFLLPLCVVMIITGGPFFWRS 120 VFLLCSPWTLL +EHI+IDIVN+ LP +VR+ ID+IGH FFL+P C+V++ T PFF S Sbjct: 88 VFLLCSPWTLLKDEHIKIDIVNHHLPLKVRSWIDLIGHVFFLMPFCIVVLWTSIPFFLVS 147 Query: 121 YQINEQSGNAGGLPQWPAKSLIIIAFSFLFVQGISELIKRIAVMRGLISDPHASQVTAIE 180 Y NEQS NAGGLPQWPAKSL+++ + L VQ ISE+IKR+AVM+GL+ DP+ ++A E Sbjct: 148 YHQNEQSFNAGGLPQWPAKSLVVLGAALLLVQAISEIIKRVAVMQGLLPDPNKLALSAHE 207 Query: 181 A---EVEHLVEAIEK 192 E E L EAI Sbjct: 208 QAALEAERLAEAISS 222 >ref|YP_001525439.1| glutamate transporter [Azorhizobium caulinodans ORS 571] dbj|BAF88521.1| glutamate transport protein [Azorhizobium caulinodans ORS 571] Length = 251 Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 109/191 (57%), Positives = 144/191 (75%), Gaps = 3/191 (1%) Query: 4 LLKLSRGIDAFTRWTGKRLAWLILLAVIISAINAIVRKTFDVSSNSWLELQWVLFSIVFL 63 LL LSR IDA G+ ++WLIL+A+I+SA NA++RK FD+SSN+WLELQWVLF+ VFL Sbjct: 50 LLALSRAIDAINARIGRLVSWLILVAIIVSAGNAVIRKLFDLSSNAWLELQWVLFAAVFL 109 Query: 64 LCSPWTLLDNEHIRIDIVNNLLPKRVRNVIDVIGHAFFLLPLCVVMIITGGPFFWRSYQI 123 +CSPWTL+DNEHIRIDIVN+ L KR+R+ ID+ G+ FFL+P +VM+ T PF SY+I Sbjct: 110 MCSPWTLMDNEHIRIDIVNSRLSKRLRDGIDIFGNVFFLMPFALVMLYTSIPFALNSYRI 169 Query: 124 NEQSGNAGGLPQWPAKSLIIIAFSFLFVQGISELIKRIAVMRGLISDPH---ASQVTAIE 180 NEQS NAGGLPQWPAK L+ + F+ L +Q ISELIKR+A+ G + DP+ + + E Sbjct: 170 NEQSLNAGGLPQWPAKMLVPVGFALLLIQAISELIKRVAIFTGKMEDPNEGAGGHLASAE 229 Query: 181 AEVEHLVEAIE 191 AE + L+ +E Sbjct: 230 AEAQRLLADVE 240