BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0204.0013.p         (57 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_07024941.1| hypothetical protein AfiDRAFT_0069 [Afipia sp...    47   0.001
ref|ZP_08628746.1| hypothetical protein CSIRO_1830 [Bradyrhizobi...    35   2.8  

>ref|ZP_07024941.1| hypothetical protein AfiDRAFT_0069 [Afipia sp. 1NLS2]
 gb|EFI52083.1| hypothetical protein AfiDRAFT_0069 [Afipia sp. 1NLS2]
          Length = 69

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 30/47 (63%)

Query: 4  LPGSLSIALSLVGSIWLVGVVALLIDAPGELVAATFVFGVLAGFVEW 50
          LP SL+IAL + GSIW V V A L+DA  EL+    + G+L G  EW
Sbjct: 16 LPHSLAIALWITGSIWAVTVAAYLLDADTELIVPLMMLGLLTGMAEW 62


>ref|ZP_08628746.1| hypothetical protein CSIRO_1830 [Bradyrhizobiaceae bacterium
          SG-6C]
 gb|EGP08551.1| hypothetical protein CSIRO_1830 [Bradyrhizobiaceae bacterium
          SG-6C]
          Length = 44

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 15 VGSIWLVGVVALLIDAPGELVAATFVFGVLAGFVEW 50
          + ++WLV + A  ++AP E+V A F  G+L G VEW
Sbjct: 1  MAALWLVAIAAHALNAPREIVYAAFGVGLLCGVVEW 36