BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0204.0008.p (426 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_530935.1| citrate transporter [Rhodopseudomonas palustris... 642 0.0 ref|YP_779733.1| citrate transporter [Rhodopseudomonas palustris... 622 e-176 ref|YP_001231535.1| citrate transporter [Geobacter uraniireducen... 617 e-174 ref|YP_532079.1| putative Na+/H+ antiporter [Rhodopseudomonas pa... 607 e-172 ref|YP_001204663.1| hypothetical protein BRADO2607 [Bradyrhizobi... 606 e-171 >ref|YP_530935.1| citrate transporter [Rhodopseudomonas palustris BisB18] gb|ABD86616.1| Citrate transporter [Rhodopseudomonas palustris BisB18] Length = 426 Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/426 (75%), Positives = 366/426 (85%), Gaps = 1/426 (0%) Query: 2 LVAAIVAIFVIAYAAIALEHPIGINKSASALLGAGLMWTAYAVWSGDTALIDRQLSESVS 61 +V AI +FV+AYAAIALEH + INK+ASAL+GAGL+W+ YAV SGD AL+ RQL+ESVS Sbjct: 1 MVGAIAIVFVVAYAAIALEHSLKINKTASALIGAGLLWSVYAVMSGDAALVARQLNESVS 60 Query: 62 STAQIVFFLIGAMTIVEVIDAHNGFEVITSLINTRKQATLMWLVGFVTFFLSSVLDNLTT 121 STAQ+VFFLIGAMTIVEVIDAHNGFEVITS+I T+KQ TL+WL+G VTFFLS+ LDNLTT Sbjct: 61 STAQVVFFLIGAMTIVEVIDAHNGFEVITSMIKTKKQVTLIWLIGLVTFFLSAALDNLTT 120 Query: 122 TIVMISLMRKLLDRQGDRLFFAAMIVIAANAGGAWSAIGDVTTTMLWIGGQITPIAIVKG 181 TIVMISL++KLL + DRLFFAAMIVIAANAGGAWSAIGDVTTTMLWI GQITP++I+KG Sbjct: 121 TIVMISLIKKLLGKSDDRLFFAAMIVIAANAGGAWSAIGDVTTTMLWIDGQITPLSIMKG 180 Query: 182 VFLASLINLVVPLLVVSAWLRGKIVEAPQRQTRAVS-TSVFERNVTFFLGLGILIAVPAF 240 +FL SL+NL+VPLLVVS LRG+ + P RQ A + T ERNVTF+LGL ILI VPAF Sbjct: 181 LFLPSLVNLIVPLLVVSYLLRGRDIVLPTRQDNAPTRTKQLERNVTFYLGLAILIGVPAF 240 Query: 241 KAVTHLPPFMGILFGLGVLWTVGELIHRRKEEDEKKRLTLVHALTRIDMSSIVFFIGILL 300 K++T LPPFMGILFGLGVLW VGE+I+R + + R + V AL RIDMSSIVFFIGILL Sbjct: 241 KSMTGLPPFMGILFGLGVLWVVGEIINRDNDSGDGMRPSWVDALMRIDMSSIVFFIGILL 300 Query: 301 AVAALEHTHVLEMLAKWLDATFGRLDVIVVLLGLLSAVIDNVPLVAASMGMYSLNQYPPD 360 AVA LEHTH+L MLAKWLD GR DVIV++LGL SAV+DNVPLVAAS+GMYSL YPPD Sbjct: 301 AVATLEHTHILAMLAKWLDFNVGRQDVIVIVLGLASAVVDNVPLVAASIGMYSLADYPPD 360 Query: 361 SFLWEFVAYCAGTGGSILIIGSASGVAAMGLEKIEFFWYVRRVSGLALLGYFGGVAAYIV 420 SFLWEF+AYCAGTGGSILIIGSA+GVAAMGLE+I+F WYVRR+SGLALLGYF G A YIV Sbjct: 361 SFLWEFIAYCAGTGGSILIIGSAAGVAAMGLERIQFLWYVRRISGLALLGYFAGCAVYIV 420 Query: 421 QYWLLH 426 QY L H Sbjct: 421 QYNLTH 426 >ref|YP_779733.1| citrate transporter [Rhodopseudomonas palustris BisA53] gb|ABJ04753.1| citrate transporter [Rhodopseudomonas palustris BisA53] Length = 426 Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust. Identities = 322/426 (75%), Positives = 368/426 (86%), Gaps = 1/426 (0%) Query: 2 LVAAIVAIFVIAYAAIALEHPIGINKSASALLGAGLMWTAYAVWSGDTALIDRQLSESVS 61 + AIVAIFV+AYAAIALEH + INK+A AL+GAGL+WT YA+ S D + QL ESVS Sbjct: 1 MTTAIVAIFVVAYAAIALEHIVRINKAAVALVGAGLLWTVYALMSVDPGAVGHQLDESVS 60 Query: 62 STAQIVFFLIGAMTIVEVIDAHNGFEVITSLINTRKQATLMWLVGFVTFFLSSVLDNLTT 121 STAQI+FFLIGAMTIVEVIDAHNGFEVITSL+ T +Q TL+WLVG +TFFLS+VLDNLTT Sbjct: 61 STAQIIFFLIGAMTIVEVIDAHNGFEVITSLVRTSRQVTLLWLVGLITFFLSAVLDNLTT 120 Query: 122 TIVMISLMRKLLDRQGDRLFFAAMIVIAANAGGAWSAIGDVTTTMLWIGGQITPIAIVKG 181 TIVM+SLMRKLL R+ DRLFF +MIVIAANAGGAWSAIGDVTTTMLWIGGQITP+AI+KG Sbjct: 121 TIVMVSLMRKLLGREEDRLFFVSMIVIAANAGGAWSAIGDVTTTMLWIGGQITPLAIMKG 180 Query: 182 VFLASLINLVVPLLVVSAWLRGKIVEAP-QRQTRAVSTSVFERNVTFFLGLGILIAVPAF 240 VF+ SLINL++PLL+VS LRG+ V AP Q FERN+ FFLGLGILI VP F Sbjct: 181 VFIPSLINLLLPLLLVSYVLRGQPVVAPVQSLVSGRPIRRFERNLIFFLGLGILILVPVF 240 Query: 241 KAVTHLPPFMGILFGLGVLWTVGELIHRRKEEDEKKRLTLVHALTRIDMSSIVFFIGILL 300 KAVTHLPPFMGILFGLG+LWTVGEL+HR K DE++ LTL HALTRIDM+S+VFFIGILL Sbjct: 241 KAVTHLPPFMGILFGLGILWTVGELLHREKPSDERRHLTLAHALTRIDMASVVFFIGILL 300 Query: 301 AVAALEHTHVLEMLAKWLDATFGRLDVIVVLLGLLSAVIDNVPLVAASMGMYSLNQYPPD 360 AVA LEH +L LA+WLD GRLD IVVLLGL+SAV+DNVPLVAA++GMYSL+Q+PPD Sbjct: 301 AVATLEHARILAALAQWLDLNVGRLDGIVVLLGLVSAVVDNVPLVAAAIGMYSLSQHPPD 360 Query: 361 SFLWEFVAYCAGTGGSILIIGSASGVAAMGLEKIEFFWYVRRVSGLALLGYFGGVAAYIV 420 SFLWEF+AYCAGTGGSILIIGSA+GVAAMGLEKI+FFWY+R++SGLALLGY GG AYIV Sbjct: 361 SFLWEFIAYCAGTGGSILIIGSAAGVAAMGLEKIQFFWYLRKISGLALLGYAGGCVAYIV 420 Query: 421 QYWLLH 426 QY L+H Sbjct: 421 QYHLIH 426 >ref|YP_001231535.1| citrate transporter [Geobacter uraniireducens Rf4] gb|ABQ26962.1| sodium/proton antiporter, NhaD family [Geobacter uraniireducens Rf4] Length = 428 Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust. Identities = 300/428 (70%), Positives = 359/428 (83%), Gaps = 3/428 (0%) Query: 2 LVAAIVAIFVIAYAAIALEHPIGINKSASALLGAGLMWTAYAVWSGDTALIDRQLSESVS 61 ++ A++ IF+IAY AIALEHPI INKSASAL+ AGL+WT YA+ +GD L+ +QL ES++ Sbjct: 1 MLTALIVIFIIAYTAIALEHPIKINKSASALIAAGLLWTIYALSTGDHNLVGKQLEESLT 60 Query: 62 STAQIVFFLIGAMTIVEVIDAHNGFEVITSLINTRKQATLMWLVGFVTFFLSSVLDNLTT 121 TAQIVFFL+GAMTIVEV+DAHNGF VITS I T +L+WL+G VTFFLSSVLDNLTT Sbjct: 61 GTAQIVFFLMGAMTIVEVVDAHNGFNVITSRIRTTSLTSLLWLIGIVTFFLSSVLDNLTT 120 Query: 122 TIVMISLMRKLLDRQGDRLFFAAMIVIAANAGGAWSAIGDVTTTMLWIGGQITPIAIVKG 181 TIVMISL++KLLDR DRLFFA +IVIAANAGGAWS IGDVTTTMLWIGGQIT +AI+KG Sbjct: 121 TIVMISLLKKLLDRHEDRLFFAGIIVIAANAGGAWSPIGDVTTTMLWIGGQITTLAIMKG 180 Query: 182 VFLASLINLVVPLLVVSAWLRGKIVEAPQRQTR---AVSTSVFERNVTFFLGLGILIAVP 238 VFLAS +N+VVPL V S +LRG+ V +P + TS FE+N+ F +G+GIL+ VP Sbjct: 181 VFLASFLNMVVPLAVTSYFLRGRQVISPSKNEEHGHRTRTSPFEQNLMFAMGIGILVCVP 240 Query: 239 AFKAVTHLPPFMGILFGLGVLWTVGELIHRRKEEDEKKRLTLVHALTRIDMSSIVFFIGI 298 FK VTHLPPFM ILFGLG+LW VGE++H +K+E+ K+ LTLV AL +IDMSSIVFFIGI Sbjct: 241 IFKTVTHLPPFMSILFGLGILWLVGEVVHSKKDEEAKEHLTLVRALKQIDMSSIVFFIGI 300 Query: 299 LLAVAALEHTHVLEMLAKWLDATFGRLDVIVVLLGLLSAVIDNVPLVAASMGMYSLNQYP 358 LLAVA LEH+H+L LA+ LD T GR DVIV ++G++SA++DNVPLVAASMGMYSL Q+P Sbjct: 301 LLAVATLEHSHILTNLARLLDQTVGRQDVIVTIIGMISAIVDNVPLVAASMGMYSLAQFP 360 Query: 359 PDSFLWEFVAYCAGTGGSILIIGSASGVAAMGLEKIEFFWYVRRVSGLALLGYFGGVAAY 418 DSFLWEF+AYCAGTGGSILIIGSA+GVAAMGLEKI FFWYV+++SGLAL+GYF G+A Y Sbjct: 361 TDSFLWEFIAYCAGTGGSILIIGSAAGVAAMGLEKIHFFWYVKKISGLALVGYFAGIATY 420 Query: 419 IVQYWLLH 426 IVQY L H Sbjct: 421 IVQYRLFH 428 >ref|YP_532079.1| putative Na+/H+ antiporter [Rhodopseudomonas palustris BisB18] gb|ABD87760.1| putative Na+/H+ antiporter [Rhodopseudomonas palustris BisB18] Length = 427 Score = 607 bits (1566), Expect = e-172, Method: Compositional matrix adjust. Identities = 300/425 (70%), Positives = 364/425 (85%), Gaps = 2/425 (0%) Query: 4 AAIVAIFVIAYAAIALEHPIGINKSASALLGAGLMWTAYAVWSGDTALIDRQLSESVSST 63 AAI+A+FV+AYAAIALEHP+GINKSA+ALLGAG++W Y++ S D A + QL ESV+S+ Sbjct: 3 AAIIAVFVVAYAAIALEHPLGINKSATALLGAGVLWILYSMSSPDHAGVMHQLDESVASS 62 Query: 64 AQIVFFLIGAMTIVEVIDAHNGFEVITSLINTRKQATLMWLVGFVTFFLSSVLDNLTTTI 123 A+I+FFL+GAMTIVEVIDAHNGFE+ITS I T + ATLMWLVG VTFFLS+VLDNLTTTI Sbjct: 63 AEIIFFLMGAMTIVEVIDAHNGFEIITSQIRTNRLATLMWLVGLVTFFLSAVLDNLTTTI 122 Query: 124 VMISLMRKLLDRQGDRLFFAAMIVIAANAGGAWSAIGDVTTTMLWIGGQITPIAIVKGVF 183 VM SL +KLLD + DRLFFAAM+VIAANAGGAWS +GDVTTTMLWIGGQ++ +AIV+ V Sbjct: 123 VMTSLTKKLLDDRDDRLFFAAMVVIAANAGGAWSPMGDVTTTMLWIGGQLSAVAIVRDVV 182 Query: 184 LASLINLVVPLLVVSAWLRGK-IVEAP-QRQTRAVSTSVFERNVTFFLGLGILIAVPAFK 241 LAS+++L+VPL++V+ LRG+ V P A + +VFERN+ FFLGLGIL+ VPAFK Sbjct: 183 LASMVSLLVPLVMVTWRLRGRAFVPKPIDADPAAATNNVFERNLIFFLGLGILVLVPAFK 242 Query: 242 AVTHLPPFMGILFGLGVLWTVGELIHRRKEEDEKKRLTLVHALTRIDMSSIVFFIGILLA 301 AVT LPPFMG+LFGLG+LW E+IHR K ++ + LTL HALTRID+SS+VFF+GILLA Sbjct: 243 AVTGLPPFMGMLFGLGILWLGAEIIHRHKPPEQFEHLTLAHALTRIDLSSVVFFLGILLA 302 Query: 302 VAALEHTHVLEMLAKWLDATFGRLDVIVVLLGLLSAVIDNVPLVAASMGMYSLNQYPPDS 361 VA LEH+H+L LA WLD T GR D+IV++LGL+SA++DNVPLVAAS+GMYSL QYPPDS Sbjct: 303 VATLEHSHILTALAAWLDQTVGRQDLIVLILGLVSAIVDNVPLVAASIGMYSLAQYPPDS 362 Query: 362 FLWEFVAYCAGTGGSILIIGSASGVAAMGLEKIEFFWYVRRVSGLALLGYFGGVAAYIVQ 421 FLW+F+AYCAGTGGSILIIGSA+GVAAMG+EKIEFFWY+RRVS LALLGYF G A Y++Q Sbjct: 363 FLWQFIAYCAGTGGSILIIGSAAGVAAMGIEKIEFFWYLRRVSVLALLGYFAGAAVYVMQ 422 Query: 422 YWLLH 426 Y L+H Sbjct: 423 YNLMH 427 >ref|YP_001204663.1| hypothetical protein BRADO2607 [Bradyrhizobium sp. ORS 278] emb|CAL76426.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 427 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 317/427 (74%), Positives = 360/427 (84%), Gaps = 2/427 (0%) Query: 2 LVAAIVAIFVIAYAAIALEHPIGINKSASALLGAGLMWTAYAVWSGDTALIDRQLSESVS 61 + AIVA+F +AYA +ALEHP INK+A+AL+GAGLMWT YA+ G A + +L++SV+ Sbjct: 1 MTTAIVAVFALAYAVVALEHPFRINKAATALVGAGLMWTIYALAGGAAAQVAGELNDSVA 60 Query: 62 STAQIVFFLIGAMTIVEVIDAHNGFEVITSLINTRKQATLMWLVGFVTFFLSSVLDNLTT 121 STAQI+FFLIGAMTIVEVIDAHNGFEV+TSLI TR Q L+WLVGFVTFFLS++LDNLTT Sbjct: 61 STAQIIFFLIGAMTIVEVIDAHNGFEVVTSLIGTRSQVALVWLVGFVTFFLSAMLDNLTT 120 Query: 122 TIVMISLMRKLLDRQGDRLFFAAMIVIAANAGGAWSAIGDVTTTMLWIGGQITPIAIVKG 181 IVM+SLM+KL R DRL FAA++VIAANAGGAWSAIGDVTT MLWIGGQITP+AI+ Sbjct: 121 AIVMVSLMKKLSGRDEDRLVFAAIVVIAANAGGAWSAIGDVTTAMLWIGGQITPVAIMTS 180 Query: 182 VFLASLINLVVPLLVVSAWLRGKIVEAPQRQTRAVSTSV--FERNVTFFLGLGILIAVPA 239 VF+ASL+NLVVPL VVS LRGK +E P RA + + FERN+ F LGLG L+ VPA Sbjct: 181 VFIASLLNLVVPLTVVSFGLRGKQLEPPVSAGRATISPILPFERNLMFALGLGALVLVPA 240 Query: 240 FKAVTHLPPFMGILFGLGVLWTVGELIHRRKEEDEKKRLTLVHALTRIDMSSIVFFIGIL 299 FKA T LPPFMGILFGLG+LW VGE+IHR K D+K+RLTLVHALTRIDM SIVFFIGIL Sbjct: 241 FKAATGLPPFMGILFGLGILWMVGEIIHREKASDQKQRLTLVHALTRIDMPSIVFFIGIL 300 Query: 300 LAVAALEHTHVLEMLAKWLDATFGRLDVIVVLLGLLSAVIDNVPLVAASMGMYSLNQYPP 359 LAVAALEHTH+L+ LA WLD T GRLD+IV++LGL SAVIDNVPLVAASMGMY L QYPP Sbjct: 301 LAVAALEHTHILQALALWLDRTVGRLDLIVIVLGLASAVIDNVPLVAASMGMYGLGQYPP 360 Query: 360 DSFLWEFVAYCAGTGGSILIIGSASGVAAMGLEKIEFFWYVRRVSGLALLGYFGGVAAYI 419 DSFLWEFVAYCAGTGGSILIIGSA+GVAAMGLE I FFWYVRR+S +ALLGYF G AYI Sbjct: 361 DSFLWEFVAYCAGTGGSILIIGSAAGVAAMGLENIHFFWYVRRISFIALLGYFAGALAYI 420 Query: 420 VQYWLLH 426 VQY L H Sbjct: 421 VQYQLTH 427