BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0204.0003.p (362 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770383.1| periplasmic mannitol-binding protein [Bradyrhiz... 669 0.0 ref|YP_001239465.1| putative periplasmic mannitol-binding protei... 664 0.0 ref|YP_001206679.1| putative periplasmic mannitol-binding protei... 660 0.0 ref|YP_531940.1| twin-arginine translocation pathway signal [Rho... 647 0.0 ref|YP_569185.1| twin-arginine translocation pathway signal [Rho... 646 0.0 >ref|NP_770383.1| periplasmic mannitol-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49008.1| periplasmic mannitol-binding protein [Bradyrhizobium japonicum USDA 110] Length = 382 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/363 (91%), Positives = 343/363 (94%), Gaps = 1/363 (0%) Query: 1 MKRRDFLKVSAAGAAATAVAAPA-IAQSSPEIKWRLTSSFPKSLDTIYGGAEQVSKYVAE 59 MKRRDFLKVSAAGAAATA A IAQSSPEIKWRLTSSFPKSLDTIYGGAEQV+KYVAE Sbjct: 20 MKRRDFLKVSAAGAAATAAVASPAIAQSSPEIKWRLTSSFPKSLDTIYGGAEQVAKYVAE 79 Query: 60 MTDNKFQIQVFAAGELAPGLQALDATSNGTVEMCHTVSYYYVGKDPTFAIYASVPFGLNA 119 MTDNKFQIQVFAAGE+ PGLQALDATSNGTVEMCHTVSYYYVGKDPTFAI+ASVPFGLNA Sbjct: 80 MTDNKFQIQVFAAGEIVPGLQALDATSNGTVEMCHTVSYYYVGKDPTFAIFASVPFGLNA 139 Query: 120 RMQNSWWYQGGGEALGNEFFKKFGVIGFPTGNTGTQMGGWFRKEIKTVADMSGLKMRIGG 179 R QNSW YQGGG L NEFFKK VIG P GNTGTQMGGWFRKEIKTVAD+SGLK RIGG Sbjct: 140 RQQNSWLYQGGGNELANEFFKKSNVIGHPCGNTGTQMGGWFRKEIKTVADLSGLKFRIGG 199 Query: 180 IAGQVLQKVGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGFAKVAKYYYYPGFWE 239 IAGQVLQKVGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGFAKVAKYYYYPGFWE Sbjct: 200 IAGQVLQKVGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGFAKVAKYYYYPGFWE 259 Query: 240 GGPTVHAFANLEKWNALPKGYQAILTNACANANSWMQARYDMQNPTALKRLVAGGTQLRP 299 GGPTVHAF NL+KWN+LPK YQAILTNA ANANSWM ARYDMQNP+ALKRLVAGGTQLRP Sbjct: 260 GGPTVHAFTNLDKWNSLPKNYQAILTNAMANANSWMAARYDMQNPSALKRLVAGGTQLRP 319 Query: 300 FTNEVLEACLKATNELWGEISAKNADFKKSVEAMQAYRSDQYLWWQVAEYTFDSFMIRSR 359 FTNEVLEACLKATNELWGEISAKNADFKKS++AMQAYRSD+YLWWQVAEYT+DSFMIRSR Sbjct: 320 FTNEVLEACLKATNELWGEISAKNADFKKSIDAMQAYRSDEYLWWQVAEYTYDSFMIRSR 379 Query: 360 TRG 362 TRG Sbjct: 380 TRG 382 >ref|YP_001239465.1| putative periplasmic mannitol-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ35559.1| putative periplasmic mannitol-binding protein [Bradyrhizobium sp. BTAi1] Length = 363 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/363 (89%), Positives = 342/363 (94%), Gaps = 1/363 (0%) Query: 1 MKRRDFLKVSAAGAAATAVA-APAIAQSSPEIKWRLTSSFPKSLDTIYGGAEQVSKYVAE 59 MKRRDFLKVSAAGAAAT +PAIAQSSPEIKWRLTSSFPKSLDTIYGGA +++KYVAE Sbjct: 1 MKRRDFLKVSAAGAAATGAIASPAIAQSSPEIKWRLTSSFPKSLDTIYGGATELAKYVAE 60 Query: 60 MTDNKFQIQVFAAGELAPGLQALDATSNGTVEMCHTVSYYYVGKDPTFAIYASVPFGLNA 119 MTDNKFQIQVFAAGE+ PGLQALDAT+NGTVEMCHTVSYYYVGKDPTFAI+ASVPFGLNA Sbjct: 61 MTDNKFQIQVFAAGEIVPGLQALDATANGTVEMCHTVSYYYVGKDPTFAIFASVPFGLNA 120 Query: 120 RMQNSWWYQGGGEALGNEFFKKFGVIGFPTGNTGTQMGGWFRKEIKTVADMSGLKMRIGG 179 R QNSW YQGGG L NEF+KKFGVIGFP GNTGTQMGGWFRKEIKTVAD+SGLK RIGG Sbjct: 121 RQQNSWLYQGGGNELANEFYKKFGVIGFPCGNTGTQMGGWFRKEIKTVADLSGLKFRIGG 180 Query: 180 IAGQVLQKVGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGFAKVAKYYYYPGFWE 239 IAGQVLQK+GVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGF KVAKYYYYPGFWE Sbjct: 181 IAGQVLQKLGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGFQKVAKYYYYPGFWE 240 Query: 240 GGPTVHAFANLEKWNALPKGYQAILTNACANANSWMQARYDMQNPTALKRLVAGGTQLRP 299 GGPTVHA+ NLEKWN+LPK YQAILTNA AN+WM ARYDMQNP+ALKRLVAGGTQLRP Sbjct: 241 GGPTVHAYTNLEKWNSLPKNYQAILTNATMAANTWMAARYDMQNPSALKRLVAGGTQLRP 300 Query: 300 FTNEVLEACLKATNELWGEISAKNADFKKSVEAMQAYRSDQYLWWQVAEYTFDSFMIRSR 359 FTNEVLEACLKATNELWGEISAKN DFKKS++AMQAYRSD+YLWWQVAEYT+DSFMIRSR Sbjct: 301 FTNEVLEACLKATNELWGEISAKNPDFKKSIDAMQAYRSDEYLWWQVAEYTYDSFMIRSR 360 Query: 360 TRG 362 TRG Sbjct: 361 TRG 363 >ref|YP_001206679.1| putative periplasmic mannitol-binding protein Trap-T transport system, dctP subunit [Bradyrhizobium sp. ORS 278] emb|CAL78462.1| putative periplasmic mannitol-binding protein; putative Trap-T transport system, dctP subunit [Bradyrhizobium sp. ORS 278] Length = 363 Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/363 (88%), Positives = 341/363 (93%), Gaps = 1/363 (0%) Query: 1 MKRRDFLKVSAAGAAATAVA-APAIAQSSPEIKWRLTSSFPKSLDTIYGGAEQVSKYVAE 59 MKRRDFLKVSAAGAAAT +PAIAQS+PEIKWRLTSSFPKSLDTIYGGA +++KYVAE Sbjct: 1 MKRRDFLKVSAAGAAATGAIASPAIAQSAPEIKWRLTSSFPKSLDTIYGGATELAKYVAE 60 Query: 60 MTDNKFQIQVFAAGELAPGLQALDATSNGTVEMCHTVSYYYVGKDPTFAIYASVPFGLNA 119 MTDNKFQIQVFAAGE+ PGLQALDATSNGTVEMCHTVSYYYVGKDPTFAI+ASVPFGLNA Sbjct: 61 MTDNKFQIQVFAAGEIVPGLQALDATSNGTVEMCHTVSYYYVGKDPTFAIFASVPFGLNA 120 Query: 120 RMQNSWWYQGGGEALGNEFFKKFGVIGFPTGNTGTQMGGWFRKEIKTVADMSGLKMRIGG 179 R QNSW YQGGG L NEF+KKFGVIGFP GNTGTQMGGWFRKEIKTVAD+SGLK RIGG Sbjct: 121 RQQNSWLYQGGGNELANEFYKKFGVIGFPCGNTGTQMGGWFRKEIKTVADLSGLKFRIGG 180 Query: 180 IAGQVLQKVGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGFAKVAKYYYYPGFWE 239 IAGQVLQK+GVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGF KVAKYYYYPGFWE Sbjct: 181 IAGQVLQKLGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGFQKVAKYYYYPGFWE 240 Query: 240 GGPTVHAFANLEKWNALPKGYQAILTNACANANSWMQARYDMQNPTALKRLVAGGTQLRP 299 GGPTVHA+ NL+KWN+LPK YQAILTNA AN+WM ARYD QNP+ALKRLVAGGTQLRP Sbjct: 241 GGPTVHAYTNLDKWNSLPKNYQAILTNATMAANTWMAARYDQQNPSALKRLVAGGTQLRP 300 Query: 300 FTNEVLEACLKATNELWGEISAKNADFKKSVEAMQAYRSDQYLWWQVAEYTFDSFMIRSR 359 FTNEVLEACLKATNELWGEISAKN DFKKS++AMQAYRSD+YLWWQVAEYT+DSFMIRSR Sbjct: 301 FTNEVLEACLKATNELWGEISAKNPDFKKSIDAMQAYRSDEYLWWQVAEYTYDSFMIRSR 360 Query: 360 TRG 362 TRG Sbjct: 361 TRG 363 >ref|YP_531940.1| twin-arginine translocation pathway signal [Rhodopseudomonas palustris BisB18] gb|ABD87621.1| Twin-arginine translocation pathway signal [Rhodopseudomonas palustris BisB18] Length = 362 Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/362 (88%), Positives = 339/362 (93%) Query: 1 MKRRDFLKVSAAGAAATAVAAPAIAQSSPEIKWRLTSSFPKSLDTIYGGAEQVSKYVAEM 60 MKRRDFLKVSA GAA AVA+PAIAQSSPEIKWRLTSSFPKSLDTIYGGAE ++K VAEM Sbjct: 1 MKRRDFLKVSATGAAVAAVASPAIAQSSPEIKWRLTSSFPKSLDTIYGGAEYLAKQVAEM 60 Query: 61 TDNKFQIQVFAAGELAPGLQALDATSNGTVEMCHTVSYYYVGKDPTFAIYASVPFGLNAR 120 TDNKFQIQVFAAGE+ PGLQALDATSN TVEM HTVSYYYVGKDPTFA+YASVPFGLNAR Sbjct: 61 TDNKFQIQVFAAGEIVPGLQALDATSNNTVEMSHTVSYYYVGKDPTFAVYASVPFGLNAR 120 Query: 121 MQNSWWYQGGGEALGNEFFKKFGVIGFPTGNTGTQMGGWFRKEIKTVADMSGLKMRIGGI 180 QNSWWYQGGG LGNEF+KK+GVIGFP GNTGTQMGGWFRKEIKTVAD+SGLK RIGGI Sbjct: 121 QQNSWWYQGGGMELGNEFYKKYGVIGFPCGNTGTQMGGWFRKEIKTVADLSGLKFRIGGI 180 Query: 181 AGQVLQKVGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGFAKVAKYYYYPGFWEG 240 AGQVLQK+GVVPQQ+AGGDIYPALEKGTIDAAEWVGPYDDEKLGF KVAKYYYYPGFWEG Sbjct: 181 AGQVLQKLGVVPQQIAGGDIYPALEKGTIDAAEWVGPYDDEKLGFQKVAKYYYYPGFWEG 240 Query: 241 GPTVHAFANLEKWNALPKGYQAILTNACANANSWMQARYDMQNPTALKRLVAGGTQLRPF 300 GPTVHAFANLEK+N+LPK YQ+IL NA NSWM ARYDMQNP ALKRLVAGGTQLRPF Sbjct: 241 GPTVHAFANLEKYNSLPKSYQSILANAAQATNSWMAARYDMQNPPALKRLVAGGTQLRPF 300 Query: 301 TNEVLEACLKATNELWGEISAKNADFKKSVEAMQAYRSDQYLWWQVAEYTFDSFMIRSRT 360 +NEVL+ACLKATNELWGEISAKNADFKK ++AMQAYRSDQYLWWQVAEYTFDSFMIRSRT Sbjct: 301 SNEVLDACLKATNELWGEISAKNADFKKGIDAMQAYRSDQYLWWQVAEYTFDSFMIRSRT 360 Query: 361 RG 362 RG Sbjct: 361 RG 362 >ref|YP_569185.1| twin-arginine translocation pathway signal [Rhodopseudomonas palustris BisB5] gb|ABE39284.1| Twin-arginine translocation pathway signal [Rhodopseudomonas palustris BisB5] Length = 362 Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/362 (88%), Positives = 340/362 (93%) Query: 1 MKRRDFLKVSAAGAAATAVAAPAIAQSSPEIKWRLTSSFPKSLDTIYGGAEQVSKYVAEM 60 MKRRDFLKVSA GAA AVA+PAIAQSSPE+KWRLTSSFPKSLDTIYGGAE ++K VAEM Sbjct: 1 MKRRDFLKVSATGAAVAAVASPAIAQSSPEVKWRLTSSFPKSLDTIYGGAEYLAKQVAEM 60 Query: 61 TDNKFQIQVFAAGELAPGLQALDATSNGTVEMCHTVSYYYVGKDPTFAIYASVPFGLNAR 120 TDNKFQIQVFAAGE+ PGLQALDATSNGTVEM HTVSYYYVGKDPTFA++ASVPFGLNAR Sbjct: 61 TDNKFQIQVFAAGEVVPGLQALDATSNGTVEMSHTVSYYYVGKDPTFAVFASVPFGLNAR 120 Query: 121 MQNSWWYQGGGEALGNEFFKKFGVIGFPTGNTGTQMGGWFRKEIKTVADMSGLKMRIGGI 180 QNSW YQGGG L NEF+KK GV+GFP GNTGTQMGGWFRKEIKTVADMSGLKMRIGGI Sbjct: 121 QQNSWLYQGGGNELANEFYKKHGVVGFPCGNTGTQMGGWFRKEIKTVADMSGLKMRIGGI 180 Query: 181 AGQVLQKVGVVPQQLAGGDIYPALEKGTIDAAEWVGPYDDEKLGFAKVAKYYYYPGFWEG 240 AGQVLQKVGVVPQQ+AGGDIYPALEKGTIDAAEWVGPYDDEKLGF KVAKYYYYPGFWEG Sbjct: 181 AGQVLQKVGVVPQQIAGGDIYPALEKGTIDAAEWVGPYDDEKLGFQKVAKYYYYPGFWEG 240 Query: 241 GPTVHAFANLEKWNALPKGYQAILTNACANANSWMQARYDMQNPTALKRLVAGGTQLRPF 300 GPTVHAFANLEK+NALPK YQ+IL NA + N+WM ARYDMQNPTALKRLVA GTQLRPF Sbjct: 241 GPTVHAFANLEKFNALPKNYQSILANAAESTNTWMAARYDMQNPTALKRLVASGTQLRPF 300 Query: 301 TNEVLEACLKATNELWGEISAKNADFKKSVEAMQAYRSDQYLWWQVAEYTFDSFMIRSRT 360 +NE+L+ACLKATNELWGEISAKNADFKK+++AMQAYRSDQYLWWQVAEYT+DSFMIRSRT Sbjct: 301 SNEILDACLKATNELWGEISAKNADFKKAIDAMQAYRSDQYLWWQVAEYTYDSFMIRSRT 360 Query: 361 RG 362 RG Sbjct: 361 RG 362