BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0203.0043.p (309 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774593.1| hypothetical protein bll7953 [Bradyrhizobium ja... 505 e-141 ref|YP_001415929.1| dihydrodipicolinate synthetase [Xanthobacter... 494 e-138 ref|YP_001203922.1| dihydrodipicolinate synthase [Bradyrhizobium... 480 e-134 ref|YP_001238226.1| dihydrodipicolinate synthase [Bradyrhizobium... 475 e-132 ref|YP_001834130.1| dihydrodipicolinate synthetase [Beijerinckia... 473 e-131 >ref|NP_774593.1| hypothetical protein bll7953 [Bradyrhizobium japonicum USDA 110] dbj|BAC53218.1| bll7953 [Bradyrhizobium japonicum USDA 110] Length = 331 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 250/305 (81%), Positives = 279/305 (91%) Query: 5 AKRPYRGVFPVAPTIFDANGNLDLDGQRRCVDFMIDAGSHGICILANFSEQFVLTDAERE 64 A+RPYRGVFPVAPTIFD G LDL+GQRRC+DFMIDAGS+G+CILANFSEQFVLTDAERE Sbjct: 27 AQRPYRGVFPVAPTIFDERGELDLEGQRRCIDFMIDAGSNGLCILANFSEQFVLTDAERE 86 Query: 65 TVMHAVLEHVAGRIPVIVTTTHFSSAVCAARSRQAETAGAAMVMIMPPYHGATFRVGEPG 124 TVMHAVLEHVAGR+PVIVTTTHFSSAVCAARS+QAE AGAAMVM+MPPYHGATFRV E G Sbjct: 87 TVMHAVLEHVAGRVPVIVTTTHFSSAVCAARSKQAEAAGAAMVMVMPPYHGATFRVPEKG 146 Query: 125 IHEFYRVVSDAINIPIMIQDAPVAGTPLSVDFLARMAKELANIRYFKIEVPMAANKLRGL 184 I EF++V+S AINIPIMIQDAPVAGTPLSV+ LAR++++ +NIRYFKIEVP AA KLR L Sbjct: 147 IVEFFKVLSGAINIPIMIQDAPVAGTPLSVELLARLSRDFSNIRYFKIEVPGAAAKLRSL 206 Query: 185 IEKGGAEIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQIIDPFFAGRRDEAVQTY 244 IE GG +IEGPWDGEEAITL+ADLDAGATGAMTGGGYPDGIRQIIDP+FAG+R+EA Y Sbjct: 207 IEVGGKDIEGPWDGEEAITLLADLDAGATGAMTGGGYPDGIRQIIDPYFAGKREEAKAAY 266 Query: 245 ARWLPLINYENRQCGLQACKVLMREGGVIKSDAVRHPLQPLHPATRAGLIEIARTLDPVV 304 RWLPLINYENRQCGL ACK +M+ GGVIKSDAVRHPLQPLHPATRAGL+E+A+ D + Sbjct: 267 ERWLPLINYENRQCGLIACKAMMQAGGVIKSDAVRHPLQPLHPATRAGLLELAKERDALA 326 Query: 305 LRWGR 309 LRWG+ Sbjct: 327 LRWGK 331 >ref|YP_001415929.1| dihydrodipicolinate synthetase [Xanthobacter autotrophicus Py2] gb|ABS66272.1| dihydrodipicolinate synthetase [Xanthobacter autotrophicus Py2] Length = 310 Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust. Identities = 238/305 (78%), Positives = 263/305 (86%) Query: 5 AKRPYRGVFPVAPTIFDANGNLDLDGQRRCVDFMIDAGSHGICILANFSEQFVLTDAERE 64 A RP++GVFPVAPT+FDA G LDLDGQ+R +D MIDAGSHGICILANFSEQFVLTD ER+ Sbjct: 6 AARPFKGVFPVAPTVFDAAGALDLDGQKRAIDCMIDAGSHGICILANFSEQFVLTDDERD 65 Query: 65 TVMHAVLEHVAGRIPVIVTTTHFSSAVCAARSRQAETAGAAMVMIMPPYHGATFRVGEPG 124 VM VLEHVAGR+PVIVTTTHFS+AVCA RSR+A+ GAAMVMIMPPYHGATFRV E Sbjct: 66 RVMVTVLEHVAGRVPVIVTTTHFSTAVCAERSRRAQERGAAMVMIMPPYHGATFRVPEAS 125 Query: 125 IHEFYRVVSDAINIPIMIQDAPVAGTPLSVDFLARMAKELANIRYFKIEVPMAANKLRGL 184 I++FYR VSDAI+IPIM+QDAPVAGTPLSV FLARMAKE+ N+ YFKIEVP AA KLR L Sbjct: 126 IYDFYRGVSDAISIPIMVQDAPVAGTPLSVPFLARMAKEIGNLAYFKIEVPQAAAKLRAL 185 Query: 185 IEKGGAEIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQIIDPFFAGRRDEAVQTY 244 IE GG IEGPWDGEEAITLMADLDAGATGAMTGG Y DGIRQ+ DP+FAG R+ A+ Y Sbjct: 186 IEAGGDAIEGPWDGEEAITLMADLDAGATGAMTGGAYADGIRQVTDPYFAGDREAAMDAY 245 Query: 245 ARWLPLINYENRQCGLQACKVLMREGGVIKSDAVRHPLQPLHPATRAGLIEIARTLDPVV 304 RWLPLINYENRQCGL ACK LM+EGGVI + VR PL +HPATRAGLIEIAR LDP+V Sbjct: 246 QRWLPLINYENRQCGLAACKALMKEGGVIAHETVRAPLPAMHPATRAGLIEIARRLDPLV 305 Query: 305 LRWGR 309 LRWG+ Sbjct: 306 LRWGK 310 >ref|YP_001203922.1| dihydrodipicolinate synthase [Bradyrhizobium sp. ORS 278] emb|CAL75685.1| Dihydrodipicolinate synthase [Bradyrhizobium sp. ORS 278] Length = 311 Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust. Identities = 240/309 (77%), Positives = 271/309 (87%) Query: 1 MTAVAKRPYRGVFPVAPTIFDANGNLDLDGQRRCVDFMIDAGSHGICILANFSEQFVLTD 60 MTA +++ Y+GVFPVAPTIFDA+G LDL+GQ+R +DFMIDAGSHGICILANFSEQFVLTD Sbjct: 3 MTASSRKLYKGVFPVAPTIFDADGRLDLEGQKRAIDFMIDAGSHGICILANFSEQFVLTD 62 Query: 61 AERETVMHAVLEHVAGRIPVIVTTTHFSSAVCAARSRQAETAGAAMVMIMPPYHGATFRV 120 ER+ VM VLEHVAGR+PVIVTTTHFS+ VCA RSR+A+ GAAMVM+MPPYHGATFRV Sbjct: 63 DERDLVMTTVLEHVAGRVPVIVTTTHFSTFVCAERSRRAQDKGAAMVMVMPPYHGATFRV 122 Query: 121 GEPGIHEFYRVVSDAINIPIMIQDAPVAGTPLSVDFLARMAKELANIRYFKIEVPMAANK 180 + I+EFYR VSDAI+IPIM+QDAPVAGTPLSV LARMAKE+ N+ YFKIEVP AA+K Sbjct: 123 PDSSIYEFYRGVSDAISIPIMVQDAPVAGTPLSVPLLARMAKEIENLAYFKIEVPRAADK 182 Query: 181 LRGLIEKGGAEIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQIIDPFFAGRRDEA 240 LR LIE GGA+I+GPWDGEEAITLMADLDAGATGAMTGGGYPDGIR+IIDP+FAG RD A Sbjct: 183 LRALIEAGGADIQGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRKIIDPYFAGDRDAA 242 Query: 241 VQTYARWLPLINYENRQCGLQACKVLMREGGVIKSDAVRHPLQPLHPATRAGLIEIARTL 300 Y RWLPLINYENRQCGL CK+LM+EGGVIK D +R P P+HPAT+ GLIEIAR L Sbjct: 243 AAAYERWLPLINYENRQCGLATCKILMKEGGVIKHDTLRSPQPPIHPATQKGLIEIARRL 302 Query: 301 DPVVLRWGR 309 DP+VLRWGR Sbjct: 303 DPLVLRWGR 311 >ref|YP_001238226.1| dihydrodipicolinate synthase [Bradyrhizobium sp. BTAi1] gb|ABQ34320.1| Dihydrodipicolinate synthase [Bradyrhizobium sp. BTAi1] Length = 309 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 238/309 (77%), Positives = 269/309 (87%) Query: 1 MTAVAKRPYRGVFPVAPTIFDANGNLDLDGQRRCVDFMIDAGSHGICILANFSEQFVLTD 60 MTA +++ Y+GVFPVAPTIFDA+G LDL+GQ+R +DFMIDAGSHGICILANFSEQFVLTD Sbjct: 1 MTASSRKLYKGVFPVAPTIFDADGRLDLEGQKRAIDFMIDAGSHGICILANFSEQFVLTD 60 Query: 61 AERETVMHAVLEHVAGRIPVIVTTTHFSSAVCAARSRQAETAGAAMVMIMPPYHGATFRV 120 ER+ VM VLEHVAGR+PVIVTTTHFS+ VCA RSR+A+ GAAMVM+MPPYHGATFRV Sbjct: 61 DERDLVMTTVLEHVAGRVPVIVTTTHFSTFVCAERSRRAQDKGAAMVMVMPPYHGATFRV 120 Query: 121 GEPGIHEFYRVVSDAINIPIMIQDAPVAGTPLSVDFLARMAKELANIRYFKIEVPMAANK 180 + I+EFYR VSDAI+IPIM+QDAPVAGTPLSV LARMAKE+ N+ YFKIEVP AA+K Sbjct: 121 PDSSIYEFYRGVSDAISIPIMVQDAPVAGTPLSVPLLARMAKEIENLAYFKIEVPRAADK 180 Query: 181 LRGLIEKGGAEIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQIIDPFFAGRRDEA 240 LR LIE GGA IEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIR+IIDP+FAG R+ A Sbjct: 181 LRALIEAGGAAIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRKIIDPYFAGDREAA 240 Query: 241 VQTYARWLPLINYENRQCGLQACKVLMREGGVIKSDAVRHPLQPLHPATRAGLIEIARTL 300 Y RWLPLINYENRQCGL CK+LM+ GGVI+ D +R P P+HPAT+ GL+EIAR L Sbjct: 241 AAAYERWLPLINYENRQCGLATCKILMKAGGVIRHDTLRSPQPPIHPATQTGLLEIARRL 300 Query: 301 DPVVLRWGR 309 DPVVLRWGR Sbjct: 301 DPVVLRWGR 309 >ref|YP_001834130.1| dihydrodipicolinate synthetase [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB96641.1| dihydrodipicolinate synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 310 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 238/308 (77%), Positives = 266/308 (86%) Query: 2 TAVAKRPYRGVFPVAPTIFDANGNLDLDGQRRCVDFMIDAGSHGICILANFSEQFVLTDA 61 T+ KRP+RGVFPVAPT+FDANG LDLDGQ+R +DFMIDAGS+G+CILANFSEQFVLTDA Sbjct: 3 TSPLKRPHRGVFPVAPTVFDANGALDLDGQKRAIDFMIDAGSNGLCILANFSEQFVLTDA 62 Query: 62 ERETVMHAVLEHVAGRIPVIVTTTHFSSAVCAARSRQAETAGAAMVMIMPPYHGATFRVG 121 ERE V VLEHVAGR+PVIVTTTHF++AVCA RSR+A+ AGAAMVMIMPPYHGATFRV Sbjct: 63 EREAVTVTVLEHVAGRVPVIVTTTHFATAVCAERSRRAQNAGAAMVMIMPPYHGATFRVP 122 Query: 122 EPGIHEFYRVVSDAINIPIMIQDAPVAGTPLSVDFLARMAKELANIRYFKIEVPMAANKL 181 E I +FYR VSDA++IPIM+QDAPVAGTPL V FLA MA+E+ N+ YFKIEVP AA KL Sbjct: 123 EAAIFDFYRAVSDAVSIPIMVQDAPVAGTPLPVPFLAHMAREIENLAYFKIEVPQAAAKL 182 Query: 182 RGLIEKGGAEIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQIIDPFFAGRRDEAV 241 R LI +GG IEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQI D +FAG R+ A+ Sbjct: 183 RALIAEGGDAIEGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQITDAYFAGDREAAM 242 Query: 242 QTYARWLPLINYENRQCGLQACKVLMREGGVIKSDAVRHPLQPLHPATRAGLIEIARTLD 301 Y RWLPLINYENRQCGL ACK LM+EGGVI D VR PLQP HPA RAGLIEIA+ L+ Sbjct: 243 DAYQRWLPLINYENRQCGLSACKALMKEGGVIAHDTVRAPLQPPHPAIRAGLIEIAQRLN 302 Query: 302 PVVLRWGR 309 P+VL+WGR Sbjct: 303 PLVLQWGR 310