BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0203.0039.p         (106 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769199.1| amicyanin protein [Bradyrhizobium japonicum USD...   156   9e-37
ref|YP_001243248.1| Amicyanin protein [Bradyrhizobium sp. BTAi1]...   137   7e-31
ref|YP_575575.1| putative amicyanin precursor protein [Nitrobact...   135   2e-30
ref|YP_004143823.1| blue (type 1) copper domain-containing prote...   117   5e-25
ref|ZP_07026268.1| blue (type 1) copper domain protein [Afipia s...   110   7e-23

>ref|NP_769199.1| amicyanin protein [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47824.1| amcY [Bradyrhizobium japonicum USDA 110]
          Length = 106

 Score =  156 bits (395), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 78/107 (72%), Positives = 86/107 (80%), Gaps = 2/107 (1%)

Query: 1   MLSGRCLATLAL-LALGAMAVPAHAATIQIVMENLVISPAEVSAKAGDTIEWVNKDVFAH 59
           M  GR LA++AL +    MAVPAHAATI+I MENLVISP EVSAK GDTI WVNKDVFAH
Sbjct: 1   MKPGR-LASIALAIIFLPMAVPAHAATIEITMENLVISPTEVSAKVGDTIRWVNKDVFAH 59

Query: 60  TATAKNGDFDVTIAPKKTVKSVLTKAGTVDYYCRYHPNMKAVLTIAP 106
           TATAKNGDFDVT+ P+K+   VL KAG VDYYCRYHPNMKA L + P
Sbjct: 60  TATAKNGDFDVTLQPEKSATFVLKKAGAVDYYCRYHPNMKATLKVEP 106


>ref|YP_001243248.1| Amicyanin protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ39342.1| Amicyanin precursor protein [Bradyrhizobium sp. BTAi1]
          Length = 104

 Score =  137 bits (344), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 64/100 (64%), Positives = 79/100 (79%), Gaps = 1/100 (1%)

Query: 7   LATLALLALGAMAVPAHAATIQIVMENLVISPAEVSAKAGDTIEWVNKDVFAHTATAKNG 66
           +A L+++ LG + VPA AA+I+I ++ LV SP    AK GDT+EW+NKD   HTATA+NG
Sbjct: 6   IALLSVVVLG-LIVPARAASIRITIDKLVFSPTMALAKVGDTVEWINKDALTHTATAQNG 64

Query: 67  DFDVTIAPKKTVKSVLTKAGTVDYYCRYHPNMKAVLTIAP 106
           +FDVT+ P KTV SVL KAGTVDYYCR+HPNMKA LTIAP
Sbjct: 65  NFDVTLPPSKTVSSVLKKAGTVDYYCRFHPNMKATLTIAP 104


>ref|YP_575575.1| putative amicyanin precursor protein [Nitrobacter hamburgensis X14]
 gb|ABE61115.1| putative amicyanin precursor protein [Nitrobacter hamburgensis X14]
          Length = 113

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/94 (64%), Positives = 77/94 (81%)

Query: 13  LALGAMAVPAHAATIQIVMENLVISPAEVSAKAGDTIEWVNKDVFAHTATAKNGDFDVTI 72
           +A+  ++VPA AATIQI+M++L I+PAE +AK GDTIEWVN+D+F H+ATA+NGD+DV +
Sbjct: 20  IAVSGISVPARAATIQILMQDLEITPAETTAKVGDTIEWVNEDIFVHSATARNGDWDVEL 79

Query: 73  APKKTVKSVLTKAGTVDYYCRYHPNMKAVLTIAP 106
             +KT   VL K G VDYYCRYHPNMKA LTIAP
Sbjct: 80  PAQKTGTLVLKKPGVVDYYCRYHPNMKARLTIAP 113


>ref|YP_004143823.1| blue (type 1) copper domain-containing protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gb|ADV13773.1| blue (type 1) copper domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 102

 Score =  117 bits (294), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/94 (60%), Positives = 66/94 (70%), Gaps = 1/94 (1%)

Query: 13  LALGAMAVPAHAATIQIVMENLVISPAEVSAKAGDTIEWVNKDVFAHTATAKNGDFDVTI 72
           L L    VPA A TIQ+ ++ LV SPA V AK GDTIEWVNKDVFAHTAT K G ++V I
Sbjct: 10  LTLAVGIVPAQAETIQVTIDRLVFSPATVEAKVGDTIEWVNKDVFAHTATVKGG-WEVMI 68

Query: 73  APKKTVKSVLTKAGTVDYYCRYHPNMKAVLTIAP 106
            PKK+    L  AG VDY+CR+HPNMK  L +AP
Sbjct: 69  PPKKSASLTLKTAGPVDYFCRFHPNMKGRLVVAP 102


>ref|ZP_07026268.1| blue (type 1) copper domain protein [Afipia sp. 1NLS2]
 gb|EFI53410.1| blue (type 1) copper domain protein [Afipia sp. 1NLS2]
          Length = 105

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 1/104 (0%)

Query: 1   MLSGRCLATLALLALGAMAVPAHAATIQIVMENLVISPAEVSAKAGDTIEWVNKDVFAHT 60
           MLS R      ++A    +  AHA T+++ ++ LV SP  V AK GDTIEWVN D+ AHT
Sbjct: 1   MLSARYWLVPMVVATVLGSASAHAETVRVTIDKLVFSPGVVKAKVGDTIEWVNNDILAHT 60

Query: 61  ATAKNGDFDVTIAPKKTVKSVLTKAGTVDYYCRYHPNMKAVLTI 104
           AT K GD+DV I PKK+   V+ KAG V+YYCR+HPNMKA + +
Sbjct: 61  ATVK-GDWDVLIPPKKSATLVIKKAGEVEYYCRFHPNMKAKIDV 103