BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0203.0038.p         (173 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_575574.1| hypothetical protein Nham_0214 [Nitrobacter ham...   270   7e-71
ref|YP_002287266.1| hypothetical protein OCAR_4252 [Oligotropha ...   261   3e-68
ref|YP_004631235.1| hypothetical protein OCA5_c02650 [Oligotroph...   261   3e-68
ref|ZP_07026269.1| conserved hypothetical protein [Afipia sp. 1N...   260   6e-68
ref|NP_769198.1| hypothetical protein blr2558 [Bradyrhizobium ja...   256   7e-67

>ref|YP_575574.1| hypothetical protein Nham_0214 [Nitrobacter hamburgensis X14]
 gb|ABE61114.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 174

 Score =  270 bits (689), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 135/173 (78%), Positives = 150/173 (86%)

Query: 1   MFVRLSIAVAALSLLNCAALAQGAKPTDPQIAHIAYTAGVIDINAAKQAEEKASNKEIKA 60
           MFVRLS A+AA+ LL   A AQGAK TDPQIAHIAYTAGVIDI AAKQA +K+ NKE+KA
Sbjct: 1   MFVRLSAAIAAVVLLTSGAFAQGAKLTDPQIAHIAYTAGVIDITAAKQALKKSENKEVKA 60

Query: 61  FAKDMARDHEAVNKQALDLVKKLKVTPEDNDTSKALSKQAADKLAELGKLKGAAYDKAYI 120
           FA DM RDHEAVN++AL LVKKLKVTPEDNDTS+ LSK AA  L +L KL GAA+DKAY+
Sbjct: 61  FAADMVRDHEAVNEKALALVKKLKVTPEDNDTSRTLSKNAAATLEKLSKLSGAAFDKAYV 120

Query: 121 DNEVAYHKAVNTALETQLIPSASNPELKSLLQTGLKIFQGHQQHAEHVAAGLK 173
           DNEVA+HKAV+ ALETQLIPSASN ELKSLL+TGLKIFQGH+QHAEHVAA LK
Sbjct: 121 DNEVAFHKAVDNALETQLIPSASNAELKSLLETGLKIFQGHEQHAEHVAAELK 173


>ref|YP_002287266.1| hypothetical protein OCAR_4252 [Oligotropha carboxidovorans OM5]
 gb|ACI91401.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
          Length = 175

 Score =  261 bits (666), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 130/173 (75%), Positives = 144/173 (83%)

Query: 1   MFVRLSIAVAALSLLNCAALAQGAKPTDPQIAHIAYTAGVIDINAAKQAEEKASNKEIKA 60
           MF + S AVAA+ LL   A AQGAK TDPQIAHIAYTAGVID+ AA+QA  K+ NKE++A
Sbjct: 3   MFAKFSTAVAAVCLLTMPAFAQGAKLTDPQIAHIAYTAGVIDVTAARQALTKSQNKEVRA 62

Query: 61  FAKDMARDHEAVNKQALDLVKKLKVTPEDNDTSKALSKQAADKLAELGKLKGAAYDKAYI 120
           FA DM RDHEAVNKQALDLVKKLKVTPEDNDTS+AL+KQAADK AEL KL G AYDKAY+
Sbjct: 63  FADDMVRDHEAVNKQALDLVKKLKVTPEDNDTSRALTKQAADKQAELAKLSGPAYDKAYV 122

Query: 121 DNEVAYHKAVNTALETQLIPSASNPELKSLLQTGLKIFQGHQQHAEHVAAGLK 173
            NEVA+HK V+ AL  QLIPSASN ELK LL+TGLKIF+GH QHAEH  AGLK
Sbjct: 123 ANEVAFHKVVDDALAKQLIPSASNAELKGLLETGLKIFEGHLQHAEHALAGLK 175


>ref|YP_004631235.1| hypothetical protein OCA5_c02650 [Oligotropha carboxidovorans OM5]
 gb|AEI01419.1| hypothetical protein OCA4_c02640 [Oligotropha carboxidovorans OM4]
 gb|AEI04994.1| hypothetical protein OCA5_c02650 [Oligotropha carboxidovorans OM5]
          Length = 173

 Score =  261 bits (666), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 130/173 (75%), Positives = 144/173 (83%)

Query: 1   MFVRLSIAVAALSLLNCAALAQGAKPTDPQIAHIAYTAGVIDINAAKQAEEKASNKEIKA 60
           MF + S AVAA+ LL   A AQGAK TDPQIAHIAYTAGVID+ AA+QA  K+ NKE++A
Sbjct: 1   MFAKFSTAVAAVCLLTMPAFAQGAKLTDPQIAHIAYTAGVIDVTAARQALTKSQNKEVRA 60

Query: 61  FAKDMARDHEAVNKQALDLVKKLKVTPEDNDTSKALSKQAADKLAELGKLKGAAYDKAYI 120
           FA DM RDHEAVNKQALDLVKKLKVTPEDNDTS+AL+KQAADK AEL KL G AYDKAY+
Sbjct: 61  FADDMVRDHEAVNKQALDLVKKLKVTPEDNDTSRALTKQAADKQAELAKLSGPAYDKAYV 120

Query: 121 DNEVAYHKAVNTALETQLIPSASNPELKSLLQTGLKIFQGHQQHAEHVAAGLK 173
            NEVA+HK V+ AL  QLIPSASN ELK LL+TGLKIF+GH QHAEH  AGLK
Sbjct: 121 ANEVAFHKVVDDALAKQLIPSASNAELKGLLETGLKIFEGHLQHAEHALAGLK 173


>ref|ZP_07026269.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gb|EFI53411.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 173

 Score =  260 bits (664), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 131/173 (75%), Positives = 145/173 (83%)

Query: 1   MFVRLSIAVAALSLLNCAALAQGAKPTDPQIAHIAYTAGVIDINAAKQAEEKASNKEIKA 60
           MF + S A+AA+ LL   A AQGAK TDPQIAHIAYTAGVID+ AAKQA  K+ NKE+ A
Sbjct: 1   MFAKFSAALAAVCLLGTPAFAQGAKLTDPQIAHIAYTAGVIDVTAAKQALSKSKNKEVIA 60

Query: 61  FAKDMARDHEAVNKQALDLVKKLKVTPEDNDTSKALSKQAADKLAELGKLKGAAYDKAYI 120
           FAKDM RDHEAVNKQALDLV KLKVTPEDNDTS+AL+KQAADK AEL KL GAAYDKAY+
Sbjct: 61  FAKDMVRDHEAVNKQALDLVNKLKVTPEDNDTSRALTKQAADKQAELAKLSGAAYDKAYV 120

Query: 121 DNEVAYHKAVNTALETQLIPSASNPELKSLLQTGLKIFQGHQQHAEHVAAGLK 173
            NEVA+HK V+ ALE QLIPS+SN ELKSLL+TGLKIF+GH QHAEH  A LK
Sbjct: 121 ANEVAFHKTVDGALEKQLIPSSSNAELKSLLETGLKIFEGHLQHAEHTLADLK 173


>ref|NP_769198.1| hypothetical protein blr2558 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47823.1| blr2558 [Bradyrhizobium japonicum USDA 110]
          Length = 194

 Score =  256 bits (655), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 144/177 (81%), Positives = 156/177 (88%), Gaps = 4/177 (2%)

Query: 1   MFVRLSIAVAALSLLNCAALAQGA----KPTDPQIAHIAYTAGVIDINAAKQAEEKASNK 56
           MF+R S AVAA  LL+  AL QGA    KPTDPQIAHIAYTAGVIDINAAKQA+++A NK
Sbjct: 18  MFIRRSAAVAAAILLSSPALLQGAGAADKPTDPQIAHIAYTAGVIDINAAKQAQKQAQNK 77

Query: 57  EIKAFAKDMARDHEAVNKQALDLVKKLKVTPEDNDTSKALSKQAADKLAELGKLKGAAYD 116
           ++KAFA+DM RDHEAVNKQAL LVKKL VTPEDNDTSKALSKQA+DKLAEL KL GAA+D
Sbjct: 78  DVKAFAEDMLRDHEAVNKQALALVKKLNVTPEDNDTSKALSKQASDKLAELDKLSGAAFD 137

Query: 117 KAYIDNEVAYHKAVNTALETQLIPSASNPELKSLLQTGLKIFQGHQQHAEHVAAGLK 173
           KAY+ NEVAYHKAVN ALETQLIPSA+N ELKSLLQTGLKIFQGHQQHAEHVAA LK
Sbjct: 138 KAYVVNEVAYHKAVNGALETQLIPSANNAELKSLLQTGLKIFQGHQQHAEHVAAELK 194