BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0203.0029.p (699 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767769.1| FAD-binding dehydrogenase [Bradyrhizobium japon... 883 0.0 ref|ZP_08628208.1| fumarate/succinate/L-aspartate dehydrogenase ... 832 0.0 ref|YP_484505.1| putative FAD-binding dehydrogenase [Rhodopseudo... 825 0.0 ref|YP_002542205.1| putative FAD-binding dehydrogenase [Agrobact... 725 0.0 ref|YP_003378822.1| fumarate reductase/succinate dehydrogenase f... 699 0.0 >ref|NP_767769.1| FAD-binding dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC46394.1| bll1129 [Bradyrhizobium japonicum USDA 110] Length = 552 Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/498 (88%), Positives = 468/498 (93%) Query: 201 IVDSPEQRRLGIKDSADLALQDWMGAAGFDREEDYWPRKWAEAYVAFAAGEKRDWLRAMG 260 +V+SPEQRRLGIKDS DLA+QDW+G AGFDR+ED+WPRKWAEAYVAFAAGEKRDWL AMG Sbjct: 54 LVNSPEQRRLGIKDSFDLAMQDWLGTAGFDRDEDHWPRKWAEAYVAFAAGEKRDWLHAMG 113 Query: 261 HRIFPVVGWAERGGYDAMGHGNSVPRFHVTWGTGPGIVEPFERRAREAANSGRLIFKFRH 320 HRI PVVGWAERGGYDAMGHGNSVPRFHVTWGTGPGIVEPFERRAREA SGRLIFKFRH Sbjct: 114 HRILPVVGWAERGGYDAMGHGNSVPRFHVTWGTGPGIVEPFERRAREAMKSGRLIFKFRH 173 Query: 321 RVDALSVTNGVVDGVSGVILEPTSVERGKSSSRNVVGDFSFRAQAVIVASGGIGGNHDLV 380 RVDALS+TNG VDGVSG +L P +VERGKSSSRNVVG+F+ +AQAVIVASGGIGGNH+LV Sbjct: 174 RVDALSITNGTVDGVSGAVLAPDNVERGKSSSRNVVGEFALKAQAVIVASGGIGGNHELV 233 Query: 381 RQNWPKRLGEPPKFMISGVPEHVDGRMIGITEAAGGRLINRDRMWHYVEGIRNWNPIWPR 440 RQNWPKRLGEPPKFMISGVPEHVDGRMIGITE AG RLINRDRMWHYVEGI+NW+PIWPR Sbjct: 234 RQNWPKRLGEPPKFMISGVPEHVDGRMIGITEQAGARLINRDRMWHYVEGIQNWSPIWPR 293 Query: 441 HGIRILPGPSSLWFDASGKRLPAPLFPGSDTLGQLHYIMGTGYDYSWFILTQSIIKKEFA 500 HGIRILPGPSS+WFDA+G RLPAPLFPGSDTLGQL YIM TG+DYSWFILTQSIIKKEFA Sbjct: 294 HGIRILPGPSSMWFDATGTRLPAPLFPGSDTLGQLKYIMSTGHDYSWFILTQSIIKKEFA 353 Query: 501 LSGSEQNPDLTGKSWRMTIKRATNKGAPAPVEAFKQHGADFIVRDNLADLISAMNKLAGN 560 LSGSEQNPDLTGKSWRMT++RATNKGAPAPVEAFK HG DFIVRD + DL++AMNKLAG+ Sbjct: 354 LSGSEQNPDLTGKSWRMTLRRATNKGAPAPVEAFKSHGVDFIVRDKIDDLVTAMNKLAGS 413 Query: 561 DLLQLDAIKAQIEARDREITNPYVKDAQVMNLHNARRYIGDRLIRTAKPHRILDPEHGPL 620 DLL+L+ IK QIEARDREI NPYVKDAQVMN+HNARRYIGD+LIRTA PHRILDP HGPL Sbjct: 414 DLLRLEHIKMQIEARDREIANPYVKDAQVMNIHNARRYIGDKLIRTASPHRILDPAHGPL 473 Query: 621 IAVKLNILTRKTLGGFETDLDSRVFGNDHQIIRGLYAAGEAAGFGGGGVHGYRSLEGTFL 680 IAVKLNILTRKTLGGFETDLDSRVFG + II GLYA GEAAGFGGGGVHGYRSLEGTFL Sbjct: 474 IAVKLNILTRKTLGGFETDLDSRVFGGEGSIIPGLYAVGEAAGFGGGGVHGYRSLEGTFL 533 Query: 681 GGCLFSGRNAGRAAAKAV 698 GGCLFSGRNAGRAAAKAV Sbjct: 534 GGCLFSGRNAGRAAAKAV 551 >ref|ZP_08628208.1| fumarate/succinate/L-aspartate dehydrogenase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09117.1| fumarate/succinate/L-aspartate dehydrogenase [Bradyrhizobiaceae bacterium SG-6C] Length = 552 Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/498 (83%), Positives = 449/498 (90%) Query: 201 IVDSPEQRRLGIKDSADLALQDWMGAAGFDREEDYWPRKWAEAYVAFAAGEKRDWLRAMG 260 +VD+PEQRRLGIKDS DLALQDWMG AGFDREED+WP+KWAEAYVAFAAGEKR WL+AMG Sbjct: 54 LVDTPEQRRLGIKDSHDLALQDWMGTAGFDREEDHWPKKWAEAYVAFAAGEKRGWLQAMG 113 Query: 261 HRIFPVVGWAERGGYDAMGHGNSVPRFHVTWGTGPGIVEPFERRAREAANSGRLIFKFRH 320 HR+FPVVGWAERGGYDAMGHGNSVPRFH+TWGTGPG+VEPFERRARE A +GR+ FKFRH Sbjct: 114 HRLFPVVGWAERGGYDAMGHGNSVPRFHITWGTGPGVVEPFERRAREHAKAGRITFKFRH 173 Query: 321 RVDALSVTNGVVDGVSGVILEPTSVERGKSSSRNVVGDFSFRAQAVIVASGGIGGNHDLV 380 RVDAL +TNG GVSG +LEP+S RG+SSSR GDFS +AQAVIVASGGIGGNHDLV Sbjct: 174 RVDALDMTNGAATGVSGKLLEPSSEARGESSSRVETGDFSLKAQAVIVASGGIGGNHDLV 233 Query: 381 RQNWPKRLGEPPKFMISGVPEHVDGRMIGITEAAGGRLINRDRMWHYVEGIRNWNPIWPR 440 R+NWPKRLG PPKFM++GVP HVDGRMIGITEAAG RLINRDRMWHYVEG+RNW PIWP Sbjct: 234 RENWPKRLGAPPKFMVAGVPAHVDGRMIGITEAAGARLINRDRMWHYVEGVRNWAPIWPG 293 Query: 441 HGIRILPGPSSLWFDASGKRLPAPLFPGSDTLGQLHYIMGTGYDYSWFILTQSIIKKEFA 500 HGIRILPGPSS+WFDA+GKRLP+PL+PG DTLGQL YIM TGYDYSWFILTQSIIKKEF Sbjct: 294 HGIRILPGPSSMWFDATGKRLPSPLYPGYDTLGQLDYIMRTGYDYSWFILTQSIIKKEFG 353 Query: 501 LSGSEQNPDLTGKSWRMTIKRATNKGAPAPVEAFKQHGADFIVRDNLADLISAMNKLAGN 560 LSGSEQNPD+TGKSWR I+RA KG P PVEAFK GADFIVRDNL DL++AMNKL G+ Sbjct: 354 LSGSEQNPDITGKSWRQVIRRAGAKGGPEPVEAFKNKGADFIVRDNLEDLVAAMNKLGGS 413 Query: 561 DLLQLDAIKAQIEARDREITNPYVKDAQVMNLHNARRYIGDRLIRTAKPHRILDPEHGPL 620 +LL I+ QIEARDREI NPYVKD QVM +HNARRYIGD+LIRTAKPH+ILDP HGPL Sbjct: 414 NLLDPVFIRTQIEARDREIDNPYVKDTQVMGIHNARRYIGDKLIRTAKPHKILDPAHGPL 473 Query: 621 IAVKLNILTRKTLGGFETDLDSRVFGNDHQIIRGLYAAGEAAGFGGGGVHGYRSLEGTFL 680 IAVKLNILTRKTLGGFETDLD+RVFGND II GLYA GEAAGFGGGGVHGYR+LEGTFL Sbjct: 474 IAVKLNILTRKTLGGFETDLDARVFGNDGNIIPGLYAVGEAAGFGGGGVHGYRALEGTFL 533 Query: 681 GGCLFSGRNAGRAAAKAV 698 GGCLFSGRNAGRAAAKAV Sbjct: 534 GGCLFSGRNAGRAAAKAV 551 >ref|YP_484505.1| putative FAD-binding dehydrogenase [Rhodopseudomonas palustris HaA2] gb|ABD05594.1| Fumarate reductase/succinate dehydrogenase flavoprotein [Rhodopseudomonas palustris HaA2] Length = 552 Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/489 (83%), Positives = 452/489 (92%) Query: 201 IVDSPEQRRLGIKDSADLALQDWMGAAGFDREEDYWPRKWAEAYVAFAAGEKRDWLRAMG 260 +VDSPEQRRLGI+DS +LALQDW+GAAGFDR+ED WPR+WAEAY+ FAAGEKRDWLRAMG Sbjct: 54 LVDSPEQRRLGIRDSYELALQDWLGAAGFDRDEDLWPRRWAEAYLGFAAGEKRDWLRAMG 113 Query: 261 HRIFPVVGWAERGGYDAMGHGNSVPRFHVTWGTGPGIVEPFERRAREAANSGRLIFKFRH 320 HRIFPVVGWAERGGYDAM HGNSVPRFHVTWGTGPG++EPF RRAR A +SGRL F+FRH Sbjct: 114 HRIFPVVGWAERGGYDAMSHGNSVPRFHVTWGTGPGLIEPFVRRARAAQDSGRLGFRFRH 173 Query: 321 RVDALSVTNGVVDGVSGVILEPTSVERGKSSSRNVVGDFSFRAQAVIVASGGIGGNHDLV 380 RVDAL++TNGVV+GVSG +LEPT RG SSSR V+GDF+ RAQAVIVASGGIGGNH+LV Sbjct: 174 RVDALTLTNGVVEGVSGAVLEPTQAPRGASSSRKVIGDFTLRAQAVIVASGGIGGNHELV 233 Query: 381 RQNWPKRLGEPPKFMISGVPEHVDGRMIGITEAAGGRLINRDRMWHYVEGIRNWNPIWPR 440 RQNWP+RLG+PP+ MISGVP HVDGRM+GITEAAG RLINRDRMWHYVEG++N++PIWPR Sbjct: 234 RQNWPQRLGKPPQRMISGVPAHVDGRMLGITEAAGARLINRDRMWHYVEGLQNFDPIWPR 293 Query: 441 HGIRILPGPSSLWFDASGKRLPAPLFPGSDTLGQLHYIMGTGYDYSWFILTQSIIKKEFA 500 HGIRILPGPSS+WFDA+GKRLPAPLFPGSDTLGQLH IM TGYDYSWF+LTQ+IIKKEFA Sbjct: 294 HGIRILPGPSSMWFDATGKRLPAPLFPGSDTLGQLHAIMATGYDYSWFVLTQAIIKKEFA 353 Query: 501 LSGSEQNPDLTGKSWRMTIKRATNKGAPAPVEAFKQHGADFIVRDNLADLISAMNKLAGN 560 LSGSEQNPDLTGKSW MT +RATNK APAPVEAFKQHGADFIVRDNL DL+ AMN L+G+ Sbjct: 354 LSGSEQNPDLTGKSWLMTARRATNKAAPAPVEAFKQHGADFIVRDNLDDLVVAMNALSGD 413 Query: 561 DLLQLDAIKAQIEARDREITNPYVKDAQVMNLHNARRYIGDRLIRTAKPHRILDPEHGPL 620 +LL+ +++QIEARDREI N +VKDAQVMN+HNARRYIGDRLIRTAKPH+ILDP +GPL Sbjct: 414 NLLKPGELRSQIEARDREIDNAFVKDAQVMNIHNARRYIGDRLIRTAKPHKILDPAYGPL 473 Query: 621 IAVKLNILTRKTLGGFETDLDSRVFGNDHQIIRGLYAAGEAAGFGGGGVHGYRSLEGTFL 680 IAV+LNILTRKTLGGFETDLD+RVFG D II GLYA GEAAGFGGGG+HGYRSLEGTFL Sbjct: 474 IAVRLNILTRKTLGGFETDLDARVFGQDGAIIPGLYAVGEAAGFGGGGMHGYRSLEGTFL 533 Query: 681 GGCLFSGRN 689 GGCLFSGRN Sbjct: 534 GGCLFSGRN 542 >ref|YP_002542205.1| putative FAD-binding dehydrogenase [Agrobacterium radiobacter K84] gb|ACM30608.1| oxidoreductase protein [Agrobacterium radiobacter K84] Length = 553 Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/496 (72%), Positives = 409/496 (82%) Query: 201 IVDSPEQRRLGIKDSADLALQDWMGAAGFDREEDYWPRKWAEAYVAFAAGEKRDWLRAMG 260 +VDSPEQRRLGIKDS DLA +DW G AGFDR EDYWPR+WAEAYV FA GEKR WLRAMG Sbjct: 55 LVDSPEQRRLGIKDSRDLAWRDWQGTAGFDRNEDYWPRRWAEAYVDFAVGEKRSWLRAMG 114 Query: 261 HRIFPVVGWAERGGYDAMGHGNSVPRFHVTWGTGPGIVEPFERRAREAANSGRLIFKFRH 320 HRIFP+VGWAERGG A HGNSVPRFH+TWGTGPG+VEPFERRAR AA G + F +RH Sbjct: 115 HRIFPIVGWAERGGGAATSHGNSVPRFHITWGTGPGVVEPFERRARAAAEKGLIRFLWRH 174 Query: 321 RVDALSVTNGVVDGVSGVILEPTSVERGKSSSRNVVGDFSFRAQAVIVASGGIGGNHDLV 380 RVD L + NG V GVSG ILE + RG +SR V DF AVIVASGGIGGN DLV Sbjct: 175 RVDRLVIVNGAVTGVSGAILEESDASRGMETSRVEVDDFELTGAAVIVASGGIGGNLDLV 234 Query: 381 RQNWPKRLGEPPKFMISGVPEHVDGRMIGITEAAGGRLINRDRMWHYVEGIRNWNPIWPR 440 RQNWP+RLG+PP+ M+SGVP+HVDGRMIGI E AGGRLINRDRMWHY EG++NW PIWP Sbjct: 235 RQNWPERLGKPPQTMVSGVPKHVDGRMIGIAEEAGGRLINRDRMWHYTEGLKNWAPIWPN 294 Query: 441 HGIRILPGPSSLWFDASGKRLPAPLFPGSDTLGQLHYIMGTGYDYSWFILTQSIIKKEFA 500 HGIRILPGPSS+WFDA G RLP P +PG DTL L +IM TGYDYSWFIL QSII+KEFA Sbjct: 295 HGIRILPGPSSMWFDAKGNRLPQPNYPGYDTLTSLQHIMSTGYDYSWFILNQSIIRKEFA 354 Query: 501 LSGSEQNPDLTGKSWRMTIKRATNKGAPAPVEAFKQHGADFIVRDNLADLISAMNKLAGN 560 LSGSEQNPD TGKSW++ I+RA K APAPVEAFKQHG DF+V +NL DL++ MN+LA + Sbjct: 355 LSGSEQNPDFTGKSWKLVIRRALGKTAPAPVEAFKQHGEDFVVANNLPDLVAGMNRLAKS 414 Query: 561 DLLQLDAIKAQIEARDREITNPYVKDAQVMNLHNARRYIGDRLIRTAKPHRILDPEHGPL 620 +LLQL+ I +I ARD +I N + KDAQ+M +HN+RRY+GD++ RTAKPH ILDP HGPL Sbjct: 415 ELLQLEKIDREIRARDGQIANRFSKDAQIMGIHNSRRYLGDKIGRTAKPHPILDPAHGPL 474 Query: 621 IAVKLNILTRKTLGGFETDLDSRVFGNDHQIIRGLYAAGEAAGFGGGGVHGYRSLEGTFL 680 IAV+LNILTRKTLGG ETDLD+RVF II GLYA GEAAGFGGGG+HGYR+LEGTFL Sbjct: 475 IAVRLNILTRKTLGGLETDLDARVFDGRGDIIPGLYAVGEAAGFGGGGMHGYRALEGTFL 534 Query: 681 GGCLFSGRNAGRAAAK 696 GGCLFSGR AGR+ A+ Sbjct: 535 GGCLFSGRAAGRSVAR 550 >ref|YP_003378822.1| fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein [Kribbella flavida DSM 17836] gb|ADB30023.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Kribbella flavida DSM 17836] Length = 551 Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/500 (71%), Positives = 407/500 (81%), Gaps = 3/500 (0%) Query: 201 IVDSPEQRRLGIKDSADLALQDWMGAAGFDR--EEDYWPRKWAEAYVAFAAGEKRDWLRA 258 VDSPEQRR+GIKDS DLALQDW+G+AGFDR +ED W R+WAEAYV FAAGEKR WL A Sbjct: 52 FVDSPEQRRMGIKDSHDLALQDWLGSAGFDRLDDEDRWARQWAEAYVDFAAGEKRPWLHA 111 Query: 259 MGHRIFPVVGWAERGGYDAMGHGNSVPRFHVTWGTGPGIVEPFERRAREAANSGRLIFKF 318 G R FPVVGWAERGGY+A GHGNSVPRFH+TWGTGPG+V PFERR REAA G + F+F Sbjct: 112 QGVRWFPVVGWAERGGYNADGHGNSVPRFHITWGTGPGLVAPFERRVREAAAKGLVEFRF 171 Query: 319 RHRVDALSVTNGVVDGVSGVILEPTSVERGKSSSRNVVGDFSFRAQAVIVASGGIGGNHD 378 RHRVD L+VT GVVDGV+G +LEP+ R +SSR V DF+ AQAVIV SGGIGGNHD Sbjct: 172 RHRVDELTVTGGVVDGVAGKVLEPSESARAVASSRVEVQDFALTAQAVIVTSGGIGGNHD 231 Query: 379 LVRQNWPKRLGEPPKFMISGVPEHVDGRMIGITEAAGGRLINRDRMWHYVEGIRNWNPIW 438 LVR WP R+G+PPK +ISGVP HVDGRM+ ITEAAGGR +NRDRMWHYVEGI NW+PIW Sbjct: 232 LVRSQWPARMGKPPKNLISGVPAHVDGRMLAITEAAGGRCVNRDRMWHYVEGIHNWDPIW 291 Query: 439 PRHGIRILPGPSSLWFDASGKRLPAPLFPGSDTLGQLHYIMGTGYDYSWFILTQSIIKKE 498 P+HGIRILPGPSSLWFDA+GKRLP PLFPG DTLG L +IM TG+DYSWF+LTQ II+KE Sbjct: 292 PQHGIRILPGPSSLWFDATGKRLPVPLFPGFDTLGTLEHIMTTGHDYSWFVLTQKIIEKE 351 Query: 499 FALSGSEQNPDLTGKSWRMTIKRATNKGAPAPVEAFKQHGADFIVRDNLADLISAMNKLA 558 FALSG EQNPDLTGK R + RA GA PV AF + GADF+VRDNLADL+ MN+L Sbjct: 352 FALSGQEQNPDLTGKDIRGVLGRARG-GATVPVRAFMEKGADFVVRDNLADLVRGMNELT 410 Query: 559 GNDLLQLDAIKAQIEARDREITNPYVKDAQVMNLHNARRYIGDRLIRTAKPHRILDPEHG 618 G +L+ L ++ QI ARDRE+ N + KD Q+ L AR Y GD+LIR A PHRILDP+ G Sbjct: 411 GENLIDLADLERQIVARDRELDNTFTKDLQITALRGARNYRGDKLIRVATPHRILDPKAG 470 Query: 619 PLIAVKLNILTRKTLGGFETDLDSRVFGNDHQIIRGLYAAGEAAGFGGGGVHGYRSLEGT 678 PLIAV+LNILTRK+LGG +TDLDSRV D + G+YAAGE AGFGGGG+HGYRSLEGT Sbjct: 471 PLIAVRLNILTRKSLGGLQTDLDSRVLRTDGTPLPGVYAAGEVAGFGGGGLHGYRSLEGT 530 Query: 679 FLGGCLFSGRNAGRAAAKAV 698 FLGGCLFSGR AGRAAAKA+ Sbjct: 531 FLGGCLFSGRTAGRAAAKAI 550