BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0203.0025.p (382 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773881.1| hypothetical protein bll7241 [Bradyrhizobium ja... 498 e-139 ref|YP_001242463.1| hypothetical protein BBta_6657 [Bradyrhizobi... 471 e-130 ref|YP_783208.1| hypothetical protein RPE_4304 [Rhodopseudomonas... 460 e-127 ref|YP_570814.1| hypothetical protein RPD_3692 [Rhodopseudomonas... 458 e-127 ref|YP_001203577.1| hypothetical protein BRADO1448 [Bradyrhizobi... 424 e-116 >ref|NP_773881.1| hypothetical protein bll7241 [Bradyrhizobium japonicum USDA 110] dbj|BAC52506.1| bll7241 [Bradyrhizobium japonicum USDA 110] Length = 435 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 255/384 (66%), Positives = 292/384 (76%), Gaps = 2/384 (0%) Query: 1 VNDMSWTPLGPPQPAPPPMP--VAFSGNRKEFFRLVARGAGLELVTVGFYRFWLTTDIRR 58 VNDM W P+G PP P V F+G+R F ++V +GA LELVT GFYRFWL TDIRR Sbjct: 52 VNDMQWAPIGSEPVPPPLPPTRVDFAGDRSVFRKMVTKGAMLELVTFGFYRFWLVTDIRR 111 Query: 59 HLWSNSQIDGDAPEYTGRGKELLIGFLVALAILVPIYLGYFLIGIEAEHLKAFASLPLVA 118 HLWSN+ IDGDA EYTGRGKELLIGFL ALAILVPIYL YFLIGIE E + FAS PL Sbjct: 112 HLWSNTSIDGDAAEYTGRGKELLIGFLFALAILVPIYLAYFLIGIEFERWQGFASTPLFI 171 Query: 119 FFYLFGQFAIYRARRYRLTRTVWRGVRFWMSGSGWVYALKASLWGVLVVITLGLALPWRE 178 FY FGQFAI+RARRYRLTRTVWRGVRFWM GSGW Y+ +A LWG+LV +TLGLALPWRE Sbjct: 172 SFYAFGQFAIFRARRYRLTRTVWRGVRFWMDGSGWAYSFRAMLWGLLVFLTLGLALPWRE 231 Query: 179 AALERYKMRHSYYGDLQGSFEGRGWEFFKRGWWLWVLMPFALYSTIFAPFAYAAFKAVEW 238 A+LERYKM+H++YGDL G FEG GW FFKRGWWLW+L P AL APF YA FKA EW Sbjct: 232 ASLERYKMQHTHYGDLSGDFEGDGWTFFKRGWWLWLLSPIALVIFPLAPFFYAEFKAREW 291 Query: 239 RWWLSGIRFGEVRLESTLRRGALIGLYWKVIGWVVLLGLVFAAYLALCTLLVASMDGSSI 298 RWWL GIR G V L S L A GLYWKVIGW +LL ++FAAYL T+LV + G + Sbjct: 292 RWWLDGIRIGGVSLSSELPHNAFYGLYWKVIGWWMLLSIIFAAYLGGATMLVVKLSGLPV 351 Query: 299 ADFFMTEAFAKSIPLIVLLGIGYLAFALALNVVLRVYLMRDLWVRVLSSTIVHNIGAAAN 358 F + AKSIP++ ++ IGY A ALA+N+++RVYL RDLW +VL + VHNIGAAA+ Sbjct: 352 EQVFGPDNTAKSIPMLAMMVIGYFALALAINIIMRVYLQRDLWAKVLETVEVHNIGAAAD 411 Query: 359 VTARGELANALGEGFADGLDVGGF 382 V GELA+ALGEGFADGLDV GF Sbjct: 412 VRGSGELASALGEGFADGLDVAGF 435 >ref|YP_001242463.1| hypothetical protein BBta_6657 [Bradyrhizobium sp. BTAi1] gb|ABQ38557.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 377 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 239/363 (65%), Positives = 279/363 (76%) Query: 20 PVAFSGNRKEFFRLVARGAGLELVTVGFYRFWLTTDIRRHLWSNSQIDGDAPEYTGRGKE 79 V FSG R EFFRLV+RGA +EL+T+GFYRFWL TDIRRHLW N+ +DGD+ EYTGRGKE Sbjct: 15 SVTFSGARSEFFRLVSRGAAIELITLGFYRFWLATDIRRHLWVNTSVDGDSAEYTGRGKE 74 Query: 80 LLIGFLVALAILVPIYLGYFLIGIEAEHLKAFASLPLVAFFYLFGQFAIYRARRYRLTRT 139 LLIGFL A+AILVPIYL YFL+ +EAE + FAS+PL+ FY FGQFAIYRARRYRLTRT Sbjct: 75 LLIGFLFAMAILVPIYLAYFLVTVEAERYEGFASIPLLISFYAFGQFAIYRARRYRLTRT 134 Query: 140 VWRGVRFWMSGSGWVYALKASLWGVLVVITLGLALPWREAALERYKMRHSYYGDLQGSFE 199 VWRGVRFWM GSGW YA +A LW +L V+TLGLA PWR AALERYKMRHS+YGDL+G FE Sbjct: 135 VWRGVRFWMDGSGWAYAGRAMLWTLLAVLTLGLAWPWRAAALERYKMRHSHYGDLRGDFE 194 Query: 200 GRGWEFFKRGWWLWVLMPFALYSTIFAPFAYAAFKAVEWRWWLSGIRFGEVRLESTLRRG 259 GRGWEFFK+ W+LW++ PFA+ PF YA FKAVEWRWWLSGIRFG VRLES+L Sbjct: 195 GRGWEFFKQVWYLWLIAPFAILLFPLLPFVYAQFKAVEWRWWLSGIRFGGVRLESSLPVN 254 Query: 260 ALIGLYWKVIGWVVLLGLVFAAYLALCTLLVASMDGSSIADFFMTEAFAKSIPLIVLLGI 319 A GLYWKVIGW +LL LV+ YL L S+ G +A A + L+V + Sbjct: 255 AFHGLYWKVIGWFILLSLVYVIYLGAVIALGTSLLGLGKDGLPQAQALATQMLLVVAMVP 314 Query: 320 GYLAFALALNVVLRVYLMRDLWVRVLSSTIVHNIGAAANVTARGELANALGEGFADGLDV 379 GY+A LA+NVV+R+YL+RD+W L S V+ I A ANV ARG+LA+ALGEGFADGLDV Sbjct: 315 GYIALILAVNVVMRLYLVRDMWAVALDSVRVYGIEAMANVAARGDLASALGEGFADGLDV 374 Query: 380 GGF 382 GF Sbjct: 375 AGF 377 >ref|YP_783208.1| hypothetical protein RPE_4304 [Rhodopseudomonas palustris BisA53] gb|ABJ08228.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 385 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 236/376 (62%), Positives = 285/376 (75%), Gaps = 11/376 (2%) Query: 18 PMPVAFSGNRKEFFRLVARGAGLELVTVGFYRFWLTTDIRRHLWSNSQIDGDAPEYTGRG 77 P P FSG+R EF RLV RG LE VT+GFYRFWL TD+RRHLW+N+ +DGDA EYTG Sbjct: 10 PQPAWFSGDRGEFRRLVMRGGFLEFVTLGFYRFWLATDLRRHLWANTSVDGDAVEYTGSA 69 Query: 78 KELLIGFLVALAILVPIYLGYFLIGIEAEHLKAFASLPLVAFFYLFGQFAIYRARRYRLT 137 KELLIGFL+ALAIL P+Y+GYFL+G+EAE +AFAS PLV YLFGQFAIYRARRYRLT Sbjct: 70 KELLIGFLIALAILAPLYVGYFLLGLEAESWQAFASTPLVVLLYLFGQFAIYRARRYRLT 129 Query: 138 RTVWRGVRFWMSGSGWVYALKASLWGVLVVITLGLALPWREAALERYKMRHSYYGDLQGS 197 RTVWRGVRFWM+GSGW YAL+A+LWG+ + +TLGL +PWR AALERYKM HS+YG+LQG Sbjct: 130 RTVWRGVRFWMTGSGWAYALRAALWGLAMGLTLGLIMPWRNAALERYKMGHSHYGELQGR 189 Query: 198 FEGRGWEFFKRGWWLWVL-------MPF----ALYSTIFAPFAYAAFKAVEWRWWLSGIR 246 FEGRG E FKRGWW+W L +PF + + I PF YAA+KA+EWRWW+SG+R Sbjct: 190 FEGRGGELFKRGWWIWALGVLSIVAVPFVPLLGIVALIALPFLYAAYKAIEWRWWVSGLR 249 Query: 247 FGEVRLESTLRRGALIGLYWKVIGWVVLLGLVFAAYLALCTLLVASMDGSSIADFFMTEA 306 GEVR ES L R A +GLYWKVIGW VLL + YL C ++ + G S FF Sbjct: 250 IGEVRFESALPRKAFVGLYWKVIGWGVLLMIGLGLYLGFCVQALSWVSGLSPEAFFKPSN 309 Query: 307 FAKSIPLIVLLGIGYLAFALALNVVLRVYLMRDLWVRVLSSTIVHNIGAAANVTARGELA 366 ++PL+ G+GYLA L L+VV+R+YL+RDLW V++ST+VH + AAA V A+GELA Sbjct: 310 LLDNVPLLACTGVGYLALMLGLSVVIRIYLLRDLWAAVVTSTVVHGLAAAAEVAAKGELA 369 Query: 367 NALGEGFADGLDVGGF 382 +A+GEGFADGLDV GF Sbjct: 370 SAVGEGFADGLDVAGF 385 >ref|YP_570814.1| hypothetical protein RPD_3692 [Rhodopseudomonas palustris BisB5] gb|ABE40913.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 385 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 242/371 (65%), Positives = 284/371 (76%), Gaps = 11/371 (2%) Query: 23 FSGNRKEFFRLVARGAGLELVTVGFYRFWLTTDIRRHLWSNSQIDGDAPEYTGRGKELLI 82 FSG+R +F RLV RGA LELVT GFYRFWL TD+RRHLWSNS + G+A EYTGR +ELL+ Sbjct: 15 FSGDRGDFLRLVMRGAVLELVTAGFYRFWLATDMRRHLWSNSSVAGEAAEYTGRARELLV 74 Query: 83 GFLVALAILVPIYLGYFLIGIEAEHLKAFASLPLVAFFYLFGQFAIYRARRYRLTRTVWR 142 GFLVALAILVP+YL YFL G+ AE + AFAS+PLV FFYLFGQFAIYRARRYRLTRTVWR Sbjct: 75 GFLVALAILVPVYLAYFLAGLAAEEITAFASVPLVLFFYLFGQFAIYRARRYRLTRTVWR 134 Query: 143 GVRFWMSGSGWVYALKASLWGVLVVITLGLALPWREAALERYKMRHSYYGDLQGSFEGRG 202 GVR WM+GSGW YA +A+LWG+LVV+TLGL LPWR+AALERYKMRHS+YGDL GSFE R Sbjct: 135 GVRLWMTGSGWAYAAQAALWGLLVVLTLGLILPWRDAALERYKMRHSHYGDLHGSFEARA 194 Query: 203 WEFFKRGWWLWVLMPFAL-----------YSTIFAPFAYAAFKAVEWRWWLSGIRFGEVR 251 E FKR WW+W+L ++ + I APF YAAF+AV+WRWWLSGIRFG VR Sbjct: 195 GELFKRAWWIWLLAVVSVVIPLLLPVLAVLTAIAAPFLYAAFRAVQWRWWLSGIRFGGVR 254 Query: 252 LESTLRRGALIGLYWKVIGWVVLLGLVFAAYLALCTLLVASMDGSSIADFFMTEAFAKSI 311 LES L GAL G+YW+ IGW+VLL VFA YLA C ++ + G F + I Sbjct: 255 LESDLHTGALFGVYWRAIGWIVLLLGVFALYLAGCVGVLLLISGLPQEQFLTPQRLGNDI 314 Query: 312 PLIVLLGIGYLAFALALNVVLRVYLMRDLWVRVLSSTIVHNIGAAANVTARGELANALGE 371 PL+VL G GYL LA+NVV+R+ L+RD W +V+ S VH + AAA+V ARG+LANALGE Sbjct: 315 PLLVLTGFGYLGLVLAMNVVIRICLLRDQWCQVVPSISVHGLDAAADVAARGDLANALGE 374 Query: 372 GFADGLDVGGF 382 GFADGLDVGG Sbjct: 375 GFADGLDVGGL 385 >ref|YP_001203577.1| hypothetical protein BRADO1448 [Bradyrhizobium sp. ORS 278] emb|CAL75340.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 349 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 223/349 (63%), Positives = 257/349 (73%) Query: 34 VARGAGLELVTVGFYRFWLTTDIRRHLWSNSQIDGDAPEYTGRGKELLIGFLVALAILVP 93 + RGA +EL+T+GFYRFWL TDIRRHLW N+ +DGD EYTGRGKELLIGFL A+ ILVP Sbjct: 1 MGRGAAIELITLGFYRFWLATDIRRHLWVNTAVDGDPAEYTGRGKELLIGFLFAMTILVP 60 Query: 94 IYLGYFLIGIEAEHLKAFASLPLVAFFYLFGQFAIYRARRYRLTRTVWRGVRFWMSGSGW 153 IYL YFLIG+EAE KAFA +PLV FY FGQFAIYRARRYRLTRTVWRG+RFWM GSGW Sbjct: 61 IYLAYFLIGVEAERFKAFAGVPLVIAFYAFGQFAIYRARRYRLTRTVWRGIRFWMDGSGW 120 Query: 154 VYALKASLWGVLVVITLGLALPWREAALERYKMRHSYYGDLQGSFEGRGWEFFKRGWWLW 213 YA +A LW L ++TLGLA PWR AALERYKMRHS+YGDL G FEG GWE FKR W+LW Sbjct: 121 AYAGRAMLWTPLTLLTLGLAWPWRVAALERYKMRHSHYGDLSGDFEGSGWELFKRAWYLW 180 Query: 214 VLMPFALYSTIFAPFAYAAFKAVEWRWWLSGIRFGEVRLESTLRRGALIGLYWKVIGWVV 273 VL P A PF YA KA+EWRWWLSGIRFG VRL+S L A GLYWK+IGW++ Sbjct: 181 VLAPLAFVLFPLFPFLYARLKAIEWRWWLSGIRFGGVRLDSKLPGSAFYGLYWKLIGWMM 240 Query: 274 LLGLVFAAYLALCTLLVASMDGSSIADFFMTEAFAKSIPLIVLLGIGYLAFALALNVVLR 333 LL F Y+ LV + G EA + ++ LG+GY+ L+ NVV+R Sbjct: 241 LLSTAFTIYMVGVFTLVERLVGKGADGLLQAEAVTNHVVFLLGLGLGYIVVVLSANVVMR 300 Query: 334 VYLMRDLWVRVLSSTIVHNIGAAANVTARGELANALGEGFADGLDVGGF 382 +YL+RDLW VL S VH I A ANV A+G+LA+ALGEGFADGLDV GF Sbjct: 301 LYLVRDLWATVLESVHVHGIEAMANVAAKGDLASALGEGFADGLDVAGF 349