BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0203.0012.p         (178 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773870.1| hypothetical protein bll7230 [Bradyrhizobium ja...   246   7e-64
ref|YP_001203582.1| hypothetical protein BRADO1453 [Bradyrhizobi...   226   1e-57
ref|YP_001242458.1| hypothetical protein BBta_6652 [Bradyrhizobi...   224   4e-57
ref|YP_361644.1| hypothetical protein XCVd0085 [Xanthomonas camp...    99   3e-19
ref|ZP_08598119.1| hypothetical protein HMPREF0401_00137 [Fusoba...    97   8e-19

>ref|NP_773870.1| hypothetical protein bll7230 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52495.1| bll7230 [Bradyrhizobium japonicum USDA 110]
          Length = 172

 Score =  246 bits (629), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 112/172 (65%), Positives = 139/172 (80%)

Query: 1   MQTELNKVIAAVEEFYAQEMFLLERDLGERTLTHRLAVYVERQFSGWQVDCNYDRLGERT 60
           MQTELNKVIAA+ +FYA E FL E+D+GER +THR AV++E+QF+GW VDCNYDRLGERT
Sbjct: 1   MQTELNKVIAALRDFYAHEGFLFEKDIGERAITHRFAVHLEKQFAGWSVDCNYDRLGERT 60

Query: 61  LRLPRGSGSSTDDHLGKSIYPDIVVHQRDIPNNLLAIELRKDSNHQPIEHDQRKLQALTD 120
           L LP G+  STDDHL KSIYPD+VVHQR+IPNNLL++E+RK SNH  + HDQ KL+ALTD
Sbjct: 61  LHLPHGTIVSTDDHLDKSIYPDVVVHQREIPNNLLSVEIRKASNHTSVTHDQHKLRALTD 120

Query: 121 PNVWFAYAMGVLVIVGQSGVSFTEVYVGGAIDSATSLWFAERLRESGLASGR 172
           P+VWFA  +GVL+++ +  V+ +EVYVGG +D   S WFA RL E GL + R
Sbjct: 121 PHVWFACWIGVLLVLDKHHVTMSEVYVGGLVDEPLSRWFATRLAELGLGASR 172


>ref|YP_001203582.1| hypothetical protein BRADO1453 [Bradyrhizobium sp. ORS 278]
 emb|CAL75345.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 167

 Score =  226 bits (575), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/167 (61%), Positives = 135/167 (80%)

Query: 5   LNKVIAAVEEFYAQEMFLLERDLGERTLTHRLAVYVERQFSGWQVDCNYDRLGERTLRLP 64
           +N++I+A++EFYA+E F+L+RDLGER LTHRL+V++ER F GW VDC+Y+RLG+R + LP
Sbjct: 1   MNRLISALQEFYARERFILDRDLGERALTHRLSVHLERNFLGWDVDCDYNRLGDRAMLLP 60

Query: 65  RGSGSSTDDHLGKSIYPDIVVHQRDIPNNLLAIELRKDSNHQPIEHDQRKLQALTDPNVW 124
           RGS  STDD L KS+YPDIVVH+R +P+NLLAIE+RK +NHQP+ HD+ KL ALTDP++W
Sbjct: 61  RGSIVSTDDELAKSVYPDIVVHKRAVPDNLLAIEVRKATNHQPLAHDRHKLMALTDPHLW 120

Query: 125 FAYAMGVLVIVGQSGVSFTEVYVGGAIDSATSLWFAERLRESGLASG 171
           FAY +GVLVI+ +  V   EVYVG  ID A S WFA RL+  GL++ 
Sbjct: 121 FAYWIGVLVILDRRSVITPEVYVGARIDPALSAWFAGRLQPMGLSNA 167


>ref|YP_001242458.1| hypothetical protein BBta_6652 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38552.1| hypothetical protein BBta_6652 [Bradyrhizobium sp. BTAi1]
          Length = 167

 Score =  224 bits (571), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 102/166 (61%), Positives = 134/166 (80%)

Query: 5   LNKVIAAVEEFYAQEMFLLERDLGERTLTHRLAVYVERQFSGWQVDCNYDRLGERTLRLP 64
           +N++I+A++EFYA+E F+L+RDLGERTLTHRLAV++ER F GW VDC+Y+RLG+R + LP
Sbjct: 1   MNRLISALQEFYARERFILDRDLGERTLTHRLAVHIERNFLGWDVDCDYNRLGDRAMLLP 60

Query: 65  RGSGSSTDDHLGKSIYPDIVVHQRDIPNNLLAIELRKDSNHQPIEHDQRKLQALTDPNVW 124
           RGS  STDD L KSIYPD+VVH+R +P+NLLA+E+RK  NHQP+ HD+ KL ALTDP++W
Sbjct: 61  RGSIVSTDDDLAKSIYPDVVVHKRGVPDNLLAVEVRKAGNHQPLAHDRHKLMALTDPHLW 120

Query: 125 FAYAMGVLVIVGQSGVSFTEVYVGGAIDSATSLWFAERLRESGLAS 170
           FAY +GVL+I+ +  V   EVYVG  ID   S WFA RL++ GL +
Sbjct: 121 FAYWIGVLLILDRRSVLTPEVYVGARIDPPLSAWFAGRLQQLGLTA 166


>ref|YP_361644.1| hypothetical protein XCVd0085 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 emb|CAJ19897.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 160

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 7/133 (5%)

Query: 7   KVIAAVEEFYAQEMFLLERDLGERTLTHRLAVYVERQFSGWQVDCNYDRLGERTLRLPRG 66
           +VI AVE+   ++  L    +GER ++HRLA+YVE QF GW VDC YDR       +P G
Sbjct: 19  RVIVAVEQLLERDRHLFVHRVGERAISHRLAIYVEAQFPGWDVDCEYDRDNAARKMIPDG 78

Query: 67  SGSSTDDHLGKSIYPDIVVHQRDIPNNLLAIELRKDSNHQPIEHDQRKLQALTDPNVWFA 126
           +G+  DD  G ++ PDI+VH+R    N +  EL+K SN  P + D  KL+A         
Sbjct: 79  TGN--DDDEGSAVLPDIIVHRRGPGENHVVFELKKSSNRLPDDRDLEKLRAY---GRHLG 133

Query: 127 YAMGVLV--IVGQ 137
           YA GV +  +VG+
Sbjct: 134 YAHGVFIRFVVGE 146


>ref|ZP_08598119.1| hypothetical protein HMPREF0401_00137 [Fusobacterium sp. 11_3_2]
 gb|EGN66035.1| hypothetical protein HMPREF0401_00137 [Fusobacterium sp. 11_3_2]
          Length = 166

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 74/129 (57%), Gaps = 14/129 (10%)

Query: 11  AVEEFYAQEMFLLERDLGERTLTHRLAVYVERQ------FSGWQVDCNYDRLGERTLRLP 64
           A  EF  +E  +++ D  ERTLT RLA Y+E Q      +  + VDC Y+R  E   RL 
Sbjct: 21  AKNEFLEKEKDIIKNDTNERTLTQRLAFYLELQLRKNIKYENYSVDCEYNRKEEDIKRLK 80

Query: 65  RGSGSSTDDHLGKSIYPDIVVHQRDIPNNLLAIELRKDS--NHQPIEHDQRKLQALTDPN 122
            G  +       K IYPDI+VHQR I NNL+AIE++K +  N   I+ D  KL+ALTD  
Sbjct: 81  FGKNTD-----KKEIYPDIIVHQRKIKNNLIAIEMKKTTSRNTDKIK-DIEKLKALTDEK 134

Query: 123 VWFAYAMGV 131
             ++Y +G+
Sbjct: 135 NCYSYILGI 143