BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0203.0001.p (215 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01044631.1| hypothetical protein NB311A_03854 [Nitrobacte... 378 e-103 ref|YP_317138.1| hypothetical protein Nwi_0519 [Nitrobacter wino... 364 4e-99 ref|NP_768831.1| hypothetical protein blr2191 [Bradyrhizobium ja... 362 2e-98 ref|YP_001242374.1| hypothetical protein BBta_6560 [Bradyrhizobi... 353 8e-96 ref|YP_001203600.1| putative Signal transduction histidine kinas... 351 4e-95 >ref|ZP_01044631.1| hypothetical protein NB311A_03854 [Nitrobacter sp. Nb-311A] gb|EAQ37412.1| hypothetical protein NB311A_03854 [Nitrobacter sp. Nb-311A] Length = 215 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/215 (84%), Positives = 198/215 (92%) Query: 1 MSGTSSPGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDNPKPEDRDFALDLIRK 60 MSGT+SPGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDNPKP+DR+FALDLIRK Sbjct: 1 MSGTTSPGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDNPKPDDREFALDLIRK 60 Query: 61 SAKTASARLQFCRLAFGAAGSSGAQIDLGDAQNMAKGHIEDGKVTLTWNLPRLLLPKNRV 120 SAKTASARLQFCRLAFGAAGS GAQIDLGDAQNMA+GH EDGK+TL WNLPRLLLPKNRV Sbjct: 61 SAKTASARLQFCRLAFGAAGSVGAQIDLGDAQNMARGHFEDGKITLAWNLPRLLLPKNRV 120 Query: 121 KLLLNMLVIAQQTIPRGGTLTIDPVGEGEAMSFRITAAGLNARVPQNIVDLLNGSSSNTV 180 KLLLN+LVIAQQTIPRGG LT+DP+GEGEAM FRITAAG NARVPQ I D L SS V Sbjct: 121 KLLLNLLVIAQQTIPRGGVLTVDPLGEGEAMGFRITAAGQNARVPQPIADRLATGSSGVV 180 Query: 181 DAHAVQPHYTRLLAEACGLKVTLALDGEKVIVVAS 215 DAHAVQP+YTRLLA+ACG+ ++LA+DG+KV+ AS Sbjct: 181 DAHAVQPYYTRLLADACGVSISLAIDGDKVVATAS 215 >ref|YP_317138.1| hypothetical protein Nwi_0519 [Nitrobacter winogradskyi Nb-255] gb|ABA03786.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 215 Score = 364 bits (935), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 175/214 (81%), Positives = 194/214 (90%) Query: 1 MSGTSSPGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDNPKPEDRDFALDLIRK 60 MSGTSSPGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDD+PKP+DR+FALDLIRK Sbjct: 1 MSGTSSPGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDDPKPDDREFALDLIRK 60 Query: 61 SAKTASARLQFCRLAFGAAGSSGAQIDLGDAQNMAKGHIEDGKVTLTWNLPRLLLPKNRV 120 SA+TASARLQFCRLAFGAAGS AQIDLGDAQN+AKGH EDGK+TL WNLPRLLLPKNRV Sbjct: 61 SARTASARLQFCRLAFGAAGSVSAQIDLGDAQNIAKGHFEDGKITLAWNLPRLLLPKNRV 120 Query: 121 KLLLNMLVIAQQTIPRGGTLTIDPVGEGEAMSFRITAAGLNARVPQNIVDLLNGSSSNTV 180 KLLLN+LVIAQQTIPRGG LTIDP+GEGEAM F+ITAAGLNARV Q + +LL S+ V Sbjct: 121 KLLLNLLVIAQQTIPRGGVLTIDPLGEGEAMGFQITAAGLNARVSQPVAELLASGSTGAV 180 Query: 181 DAHAVQPHYTRLLAEACGLKVTLALDGEKVIVVA 214 AHAVQP+YTRLLAEACG+ ++L +G+KV+ A Sbjct: 181 YAHAVQPYYTRLLAEACGISISLVAEGDKVVATA 214 >ref|NP_768831.1| hypothetical protein blr2191 [Bradyrhizobium japonicum USDA 110] dbj|BAC47456.1| blr2191 [Bradyrhizobium japonicum USDA 110] Length = 237 Score = 362 bits (929), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 179/217 (82%), Positives = 192/217 (88%), Gaps = 2/217 (0%) Query: 1 MSGTSSPGPA--PDALELAALLCSRVCHDLISPVGAIVNGLEVLDDNPKPEDRDFALDLI 58 MS SSP A PD LELAALLCSRVCHDLISPVGAIVNGLEVLDD+PKPEDR+FALDLI Sbjct: 21 MSDASSPATATAPDMLELAALLCSRVCHDLISPVGAIVNGLEVLDDDPKPEDREFALDLI 80 Query: 59 RKSAKTASARLQFCRLAFGAAGSSGAQIDLGDAQNMAKGHIEDGKVTLTWNLPRLLLPKN 118 RKSAKTASARLQFCRLAFGAAGSSGAQIDLGDAQ MA+GHIEDGK T+TWNLPRLLLPKN Sbjct: 81 RKSAKTASARLQFCRLAFGAAGSSGAQIDLGDAQTMARGHIEDGKCTITWNLPRLLLPKN 140 Query: 119 RVKLLLNMLVIAQQTIPRGGTLTIDPVGEGEAMSFRITAAGLNARVPQNIVDLLNGSSSN 178 RVKLLLNMLV+AQ TIPRGGTLTIDPVGEGE MSFRITA G NAR+PQNI +LL+G Sbjct: 141 RVKLLLNMLVVAQHTIPRGGTLTIDPVGEGETMSFRITATGHNARLPQNIAELLSGERGP 200 Query: 179 TVDAHAVQPHYTRLLAEACGLKVTLALDGEKVIVVAS 215 DAHA+QP+YTRLLA+ACGL VTLA +G +IV AS Sbjct: 201 AADAHAIQPYYTRLLAQACGLTVTLAPEGAAIIVTAS 237 >ref|YP_001242374.1| hypothetical protein BBta_6560 [Bradyrhizobium sp. BTAi1] gb|ABQ38468.1| hypothetical protein BBta_6560 [Bradyrhizobium sp. BTAi1] Length = 220 Score = 353 bits (907), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 179/220 (81%), Positives = 200/220 (90%), Gaps = 5/220 (2%) Query: 1 MSGTSS-----PGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDNPKPEDRDFAL 55 MSGTSS P PAPD LELAALLCS+VCHDLISPVGAIVNGLEVLDDNPKPEDRDFAL Sbjct: 1 MSGTSSSEIADPIPAPDTLELAALLCSKVCHDLISPVGAIVNGLEVLDDNPKPEDRDFAL 60 Query: 56 DLIRKSAKTASARLQFCRLAFGAAGSSGAQIDLGDAQNMAKGHIEDGKVTLTWNLPRLLL 115 +LIRKSAKTASARLQFCRLAFGAAGS+GAQIDLGDAQ MA+GHIED K ++TWNLPRLLL Sbjct: 61 ELIRKSAKTASARLQFCRLAFGAAGSAGAQIDLGDAQTMARGHIEDAKTSITWNLPRLLL 120 Query: 116 PKNRVKLLLNMLVIAQQTIPRGGTLTIDPVGEGEAMSFRITAAGLNARVPQNIVDLLNGS 175 PKNRVKLLLNM+V+AQQTIPRGG LT+DP+GEGE MSFR+ A GLNAR+PQNIV+LL G+ Sbjct: 121 PKNRVKLLLNMMVVAQQTIPRGGVLTVDPIGEGETMSFRVAATGLNARLPQNIVNLLAGA 180 Query: 176 SSNTVDAHAVQPHYTRLLAEACGLKVTLALDGEKVIVVAS 215 +T+DAHAVQP+YTRLLA+ACGLKVTLA DGE ++V A+ Sbjct: 181 QQSTIDAHAVQPYYTRLLADACGLKVTLAADGEAMVVQAA 220 >ref|YP_001203600.1| putative Signal transduction histidine kinase [Bradyrhizobium sp. ORS 278] emb|CAL75363.1| Conserved hypothetical protein; putative Signal transduction histidine kinase [Bradyrhizobium sp. ORS 278] Length = 220 Score = 351 bits (901), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 179/220 (81%), Positives = 200/220 (90%), Gaps = 5/220 (2%) Query: 1 MSGTSS-----PGPAPDALELAALLCSRVCHDLISPVGAIVNGLEVLDDNPKPEDRDFAL 55 MSGTSS P PAPD LELAALLCS+VCHDLISPVGAIVNGLEVLDDNPKPEDRDFAL Sbjct: 1 MSGTSSSEIANPIPAPDTLELAALLCSKVCHDLISPVGAIVNGLEVLDDNPKPEDRDFAL 60 Query: 56 DLIRKSAKTASARLQFCRLAFGAAGSSGAQIDLGDAQNMAKGHIEDGKVTLTWNLPRLLL 115 +LIRKSAKTASARLQFCRLAFGAAGS+GAQIDLGDAQ MA+GHIED K ++TWNLPRLLL Sbjct: 61 ELIRKSAKTASARLQFCRLAFGAAGSAGAQIDLGDAQTMARGHIEDAKTSITWNLPRLLL 120 Query: 116 PKNRVKLLLNMLVIAQQTIPRGGTLTIDPVGEGEAMSFRITAAGLNARVPQNIVDLLNGS 175 PKNRVKLLLNM+V+AQQTIPRGG LTIDP+GEGE+MSFR++A GLNAR+PQNIV+LL G Sbjct: 121 PKNRVKLLLNMMVVAQQTIPRGGVLTIDPIGEGESMSFRVSATGLNARLPQNIVNLLGGE 180 Query: 176 SSNTVDAHAVQPHYTRLLAEACGLKVTLALDGEKVIVVAS 215 +T+DAHAVQP+YTRLLA+ACGLKVTLA DG ++V A+ Sbjct: 181 LQSTIDAHAVQPYYTRLLADACGLKVTLAADGAAMVVQAA 220