BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0202.0003.p         (318 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001238961.1| phosphoenolpyruvate carboxylase [Bradyrhizob...   570   e-160
ref|NP_769595.1| phosphoenolpyruvate carboxylase [Bradyrhizobium...   569   e-160
ref|YP_001204637.1| phosphoenolpyruvate carboxylase [Bradyrhizob...   558   e-157
ref|YP_318884.1| phosphoenolpyruvate carboxylase [Nitrobacter wi...   547   e-154
ref|YP_577930.1| phosphoenolpyruvate carboxylase [Nitrobacter ha...   544   e-153

>ref|YP_001238961.1| phosphoenolpyruvate carboxylase [Bradyrhizobium sp. BTAi1]
 gb|ABQ35055.1| Phosphoenolpyruvate carboxylase [Bradyrhizobium sp. BTAi1]
          Length = 928

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 281/318 (88%), Positives = 302/318 (94%)

Query: 1   VFERHGVRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEV 60
           +FERHG+RLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEV
Sbjct: 611 IFERHGIRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEV 670

Query: 61  GRSNLEILAAATLETSLLQPRQSAPRPEYLKAMEEISALAFKAYRGLVYETEGFADYFWG 120
           GR+NLEILAAATLE SLL PRQ AP+ EYL AM+ +S LAFKAYRGLVYET+GF DYFW 
Sbjct: 671 GRNNLEILAAATLEASLLHPRQPAPKREYLTAMDRLSELAFKAYRGLVYETDGFVDYFWA 730

Query: 121 STVINEIATLNIGSRPASRKKTREIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVESWISG 180
           STVINEIATLNIGSRPASRKKTR IEDLRAIPWVFSWAQCRLMLPGWYGFGSAVE+WI+ 
Sbjct: 731 STVINEIATLNIGSRPASRKKTRAIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVETWIAE 790

Query: 181 HPEQGMAFLQELYRQWPFFRTLLSNMDMVLAKSSIAIASRYAELVPDVALREKIFGQIRR 240
           +PEQGM FL+ELY++WPFFR LLSNMDMVLAKSSIAIASRYAELVPD ALREKIFG+IRR
Sbjct: 791 NPEQGMPFLRELYQEWPFFRMLLSNMDMVLAKSSIAIASRYAELVPDEALREKIFGRIRR 850

Query: 241 EWHLSIETLLDIMGHDRLLQGNPLLERGIRNRFPYMDPLNHVQVELLKEYRAQNPDEQVL 300
           EWHL+IETLLDIMG +RLLQGNPLLER +RNRFPY+DPLNHVQVELLKE+RAQNPDEQVL
Sbjct: 851 EWHLAIETLLDIMGQERLLQGNPLLERSVRNRFPYLDPLNHVQVELLKEHRAQNPDEQVL 910

Query: 301 RGIQITINGISAGLRNSG 318
           RGIQ+TINGISAGLRN+G
Sbjct: 911 RGIQLTINGISAGLRNTG 928


>ref|NP_769595.1| phosphoenolpyruvate carboxylase [Bradyrhizobium japonicum USDA 110]
 sp|Q89R17.1|CAPP_BRAJA RecName: Full=Phosphoenolpyruvate carboxylase; Short=PEPC;
           Short=PEPCase
 dbj|BAC48220.1| PEP carboxylase [Bradyrhizobium japonicum USDA 110]
          Length = 932

 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 280/318 (88%), Positives = 301/318 (94%)

Query: 1   VFERHGVRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEV 60
           VFERH VRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEV
Sbjct: 615 VFERHHVRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEV 674

Query: 61  GRSNLEILAAATLETSLLQPRQSAPRPEYLKAMEEISALAFKAYRGLVYETEGFADYFWG 120
           GR+NLEILAAATLE SLL PRQSAPR EYL AM+E+S+LAF+AYRGLVYET+GF DYFW 
Sbjct: 675 GRNNLEILAAATLEASLLHPRQSAPRREYLTAMDELSSLAFRAYRGLVYETDGFVDYFWA 734

Query: 121 STVINEIATLNIGSRPASRKKTREIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVESWISG 180
           STVINEIATLNIGSRPASRKKTR IEDLRAIPWVFSWAQCRLMLPGWYGFG+AVE WI+ 
Sbjct: 735 STVINEIATLNIGSRPASRKKTRAIEDLRAIPWVFSWAQCRLMLPGWYGFGTAVEQWIAE 794

Query: 181 HPEQGMAFLQELYRQWPFFRTLLSNMDMVLAKSSIAIASRYAELVPDVALREKIFGQIRR 240
           HP++GM FL+ELY++WPFFR LLSNMDMVLAKSSIAIASRYAELVPD ALREKIFG+IRR
Sbjct: 795 HPDKGMPFLKELYKEWPFFRMLLSNMDMVLAKSSIAIASRYAELVPDEALREKIFGRIRR 854

Query: 241 EWHLSIETLLDIMGHDRLLQGNPLLERGIRNRFPYMDPLNHVQVELLKEYRAQNPDEQVL 300
           EWH  IETLLDIMG DRLLQGNPLLER +R+RFPY+DPLNHVQVELL+E+RAQNPDEQVL
Sbjct: 855 EWHSCIETLLDIMGQDRLLQGNPLLERSVRHRFPYLDPLNHVQVELLREHRAQNPDEQVL 914

Query: 301 RGIQITINGISAGLRNSG 318
           RGIQ+TINGISAGLRN+G
Sbjct: 915 RGIQLTINGISAGLRNTG 932


>ref|YP_001204637.1| phosphoenolpyruvate carboxylase [Bradyrhizobium sp. ORS 278]
 emb|CAL76400.1| phosphoenolpyruvate carboxylase [Bradyrhizobium sp. ORS 278]
          Length = 933

 Score =  558 bits (1439), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 278/318 (87%), Positives = 298/318 (93%)

Query: 1   VFERHGVRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEV 60
           +FERH VRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEV
Sbjct: 616 IFERHHVRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEV 675

Query: 61  GRSNLEILAAATLETSLLQPRQSAPRPEYLKAMEEISALAFKAYRGLVYETEGFADYFWG 120
           GR NLEILAAATLE SLL PRQ AP+ EYL AM+ +S LAFKAYRGLVYET+GF DYFW 
Sbjct: 676 GRYNLEILAAATLEASLLHPRQPAPKREYLTAMDRLSELAFKAYRGLVYETDGFVDYFWS 735

Query: 121 STVINEIATLNIGSRPASRKKTREIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVESWISG 180
           STVINEIATLNIGSRPASRKKTR IEDLRAIPWVFSWAQCRLMLPGWYGFGSAVE+WI+ 
Sbjct: 736 STVINEIATLNIGSRPASRKKTRAIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVEAWIAE 795

Query: 181 HPEQGMAFLQELYRQWPFFRTLLSNMDMVLAKSSIAIASRYAELVPDVALREKIFGQIRR 240
           +PEQGM FL+ELY++WPFFR LLSNMDMVLAKSSIAIASRYAELVPD ALRE+IFG+IRR
Sbjct: 796 NPEQGMPFLRELYQEWPFFRMLLSNMDMVLAKSSIAIASRYAELVPDEALREQIFGRIRR 855

Query: 241 EWHLSIETLLDIMGHDRLLQGNPLLERGIRNRFPYMDPLNHVQVELLKEYRAQNPDEQVL 300
           EW+L IETLLDI G +RLLQGNPLLER +RNRFPY+DPLNHVQVELLKE+RAQNPDEQVL
Sbjct: 856 EWNLVIETLLDITGQERLLQGNPLLERSVRNRFPYLDPLNHVQVELLKEHRAQNPDEQVL 915

Query: 301 RGIQITINGISAGLRNSG 318
           RGIQ+TINGISAGLRN+G
Sbjct: 916 RGIQLTINGISAGLRNTG 933


>ref|YP_318884.1| phosphoenolpyruvate carboxylase [Nitrobacter winogradskyi Nb-255]
 gb|ABA05532.1| Phosphoenolpyruvate carboxylase [Nitrobacter winogradskyi Nb-255]
          Length = 928

 Score =  547 bits (1410), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 274/318 (86%), Positives = 294/318 (92%)

Query: 1   VFERHGVRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEV 60
           VFERH VRLRLFHGRGGSVGRGGGPSYDAI+AQPGGAVNGQIRITEQGEIISSKYSNAEV
Sbjct: 611 VFERHKVRLRLFHGRGGSVGRGGGPSYDAILAQPGGAVNGQIRITEQGEIISSKYSNAEV 670

Query: 61  GRSNLEILAAATLETSLLQPRQSAPRPEYLKAMEEISALAFKAYRGLVYETEGFADYFWG 120
           GRSNLEILAAATLE SLLQPRQSAP  EYL AME +S+LA+KAYR LV+ET GF DYFW 
Sbjct: 671 GRSNLEILAAATLEASLLQPRQSAPSLEYLDAMESLSSLAYKAYRNLVFETPGFEDYFWA 730

Query: 121 STVINEIATLNIGSRPASRKKTREIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVESWISG 180
           STVINEI+TLNIGSRPASRKKTR IEDLRAIPWVFSWAQCR+MLPGWYGFGSAVE+WI  
Sbjct: 731 STVINEISTLNIGSRPASRKKTRRIEDLRAIPWVFSWAQCRVMLPGWYGFGSAVEAWIES 790

Query: 181 HPEQGMAFLQELYRQWPFFRTLLSNMDMVLAKSSIAIASRYAELVPDVALREKIFGQIRR 240
           HP++GMAFLQELY +WPFFR LLSNMDMVLAKSSIAIASRYA+LVPDV LRE IFG+IRR
Sbjct: 791 HPDKGMAFLQELYGEWPFFRMLLSNMDMVLAKSSIAIASRYADLVPDVELREAIFGRIRR 850

Query: 241 EWHLSIETLLDIMGHDRLLQGNPLLERGIRNRFPYMDPLNHVQVELLKEYRAQNPDEQVL 300
           EWHL+I+ LL IMG +RLL GNPLLER IRNRFPY+DPLNHVQVELLK++RAQ  DEQVL
Sbjct: 851 EWHLTIDKLLAIMGQERLLAGNPLLERSIRNRFPYLDPLNHVQVELLKDHRAQCEDEQVL 910

Query: 301 RGIQITINGISAGLRNSG 318
           RGIQ+TINGISAGLRNSG
Sbjct: 911 RGIQLTINGISAGLRNSG 928


>ref|YP_577930.1| phosphoenolpyruvate carboxylase [Nitrobacter hamburgensis X14]
 gb|ABE63470.1| Phosphoenolpyruvate carboxylase [Nitrobacter hamburgensis X14]
          Length = 929

 Score =  544 bits (1401), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 273/318 (85%), Positives = 293/318 (92%)

Query: 1   VFERHGVRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEV 60
           VFERH VRLRLFHGRGGSVGRGGGPSYDAI+AQPGGAVNGQIRITEQGEIISSKYSNAEV
Sbjct: 612 VFERHQVRLRLFHGRGGSVGRGGGPSYDAILAQPGGAVNGQIRITEQGEIISSKYSNAEV 671

Query: 61  GRSNLEILAAATLETSLLQPRQSAPRPEYLKAMEEISALAFKAYRGLVYETEGFADYFWG 120
           GR+NLEILAAATLE SLLQPRQSAP  +YL AME +S+ AF AYR LVYET GF DYFW 
Sbjct: 672 GRNNLEILAAATLEASLLQPRQSAPSLDYLDAMESLSSRAFAAYRNLVYETPGFEDYFWA 731

Query: 121 STVINEIATLNIGSRPASRKKTREIEDLRAIPWVFSWAQCRLMLPGWYGFGSAVESWISG 180
           STVINEI+TLNIGSRPASRKKTR IEDLRAIPWVFSWAQCR+MLPGWYGFGSAVESWI+ 
Sbjct: 732 STVINEISTLNIGSRPASRKKTRRIEDLRAIPWVFSWAQCRVMLPGWYGFGSAVESWIAD 791

Query: 181 HPEQGMAFLQELYRQWPFFRTLLSNMDMVLAKSSIAIASRYAELVPDVALREKIFGQIRR 240
           HP++GMAFLQELY +WPFFR LLSNMDMVLAKSSIAIASRYA+LVPDV LRE IFG+IR 
Sbjct: 792 HPDKGMAFLQELYGEWPFFRMLLSNMDMVLAKSSIAIASRYADLVPDVTLRETIFGRIRS 851

Query: 241 EWHLSIETLLDIMGHDRLLQGNPLLERGIRNRFPYMDPLNHVQVELLKEYRAQNPDEQVL 300
           EWHL+I+TLL IMG +RLL GNPLLER IRNRFPY+DPLNHVQVELLK++RAQ  DEQVL
Sbjct: 852 EWHLTIDTLLAIMGQERLLAGNPLLERSIRNRFPYLDPLNHVQVELLKDHRAQGGDEQVL 911

Query: 301 RGIQITINGISAGLRNSG 318
           RGIQ+TINGISAGLRNSG
Sbjct: 912 RGIQLTINGISAGLRNSG 929