BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0201.0009.p         (144 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002299581.1| hypothetical protein RC1_3409 [Rhodospirillu...    35   4.5  
ref|XP_002742262.1| PREDICTED: Down syndrome cell adhesion molec...    34   6.0  

>ref|YP_002299581.1| hypothetical protein RC1_3409 [Rhodospirillum centenum SW]
 gb|ACJ00769.1| hypothetical protein RC1_3409 [Rhodospirillum centenum SW]
          Length = 426

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 22/32 (68%)

Query: 109 LQHPAAAMLPERIHFDIAAIRRQLQQPADRSA 140
           L H   ++L ++ H DI +IRR +Q+ AD+SA
Sbjct: 50  LIHLHMSLLKDKTHLDIMSIRRAMQETADQSA 81


>ref|XP_002742262.1| PREDICTED: Down syndrome cell adhesion molecule-like [Saccoglossus
            kowalevskii]
          Length = 2191

 Score = 34.3 bits (77), Expect = 6.0,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 11/61 (18%)

Query: 48   DETDLLTLYIYGRLLAFGFGGLRAGEYACRAH-----------AGLRAEPRAKSISIALT 96
            + TD L LY  G L   G   L AG Y CRAH             ++A P++  +S++LT
Sbjct: 1369 EPTDHLQLYQNGSLYITGAQPLDAGNYTCRAHNHWGTDEILVQLKVQAPPKSPRLSVSLT 1428

Query: 97   S 97
            +
Sbjct: 1429 T 1429