BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0201.0005.p (246 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770955.1| O-antigen export system ATP-binding protein [Br... 389 e-106 ref|YP_001242836.1| putative O-antigen export system ATP-binding... 345 3e-93 ref|YP_002546388.1| polysaccharide ABC transporter [Agrobacteriu... 265 7e-69 gb|EDZ38162.1| ABC transporter ATP-binding protein [Leptospirill... 185 7e-45 emb|CCD29568.1| O-antigen export system ATP-binding protein rfbE... 179 2e-43 >ref|NP_770955.1| O-antigen export system ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49580.1| bll4315 [Bradyrhizobium japonicum USDA 110] Length = 246 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 189/243 (77%), Positives = 214/243 (88%) Query: 1 MASIHLRDVCLDYPLYGAYDFSLKRRLLGRLFRQTSEMRTIRAVDGISIEAKAGARIGLA 60 M SI+LR+VCLDYPLYGAYDFSLKRRLLG + R+ EMR IRAVD ++I+A+AG+RIGLA Sbjct: 1 MVSINLRNVCLDYPLYGAYDFSLKRRLLGHIIREPGEMRIIRAVDNVTIKAEAGSRIGLA 60 Query: 61 GPNGSGKSTLLRLIAGVFPATSGRVEISGNIVPLLGLGAGVNLDFVAADNISLLLRIAGR 120 GPNGSGKSTLLRLIAGV+P +SG V + GN+VPLLGL AGVNLDFVA DNI+LLLRI+GR Sbjct: 61 GPNGSGKSTLLRLIAGVYPPSSGSVSLQGNVVPLLGLNAGVNLDFVAEDNIALLLRISGR 120 Query: 121 KPTPAILDEIWAFTELEERMRRLPLRMFSSGMLMRVLFATATAFPADILLLDEWLSVVDE 180 KPT A++D+IWAFTELE RM+RLPLRMFSSGMLMRVLFATATAFPADILLLDEWLSVVDE Sbjct: 121 KPTRAVIDDIWAFTELEARMQRLPLRMFSSGMLMRVLFATATAFPADILLLDEWLSVVDE 180 Query: 181 NFSAKAEQRLRKMVETAAIVIIASHDHALLRRTCNSIINLDRGRIASTVALDAPAPHHLE 240 +F+ KA++RL MV AAIVIIASHD LLRRTC SIINLD GRIASTV ++ PA H E Sbjct: 181 HFAEKAQERLLHMVSQAAIVIIASHDQPLLRRTCTSIINLDHGRIASTVTVEPPATHSFE 240 Query: 241 LRE 243 LRE Sbjct: 241 LRE 243 >ref|YP_001242836.1| putative O-antigen export system ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ38930.1| putative O-antigen export system ATP-binding protein [Bradyrhizobium sp. BTAi1] Length = 246 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 171/246 (69%), Positives = 198/246 (80%) Query: 1 MASIHLRDVCLDYPLYGAYDFSLKRRLLGRLFRQTSEMRTIRAVDGISIEAKAGARIGLA 60 M SI L +VCLDYPLYGAYDFS+KRRL+ RL + +RA+D +S++ ++GARIGL Sbjct: 1 MTSITLSNVCLDYPLYGAYDFSIKRRLMNRLLGEADGAHAVRAIDQVSLDIRSGARIGLF 60 Query: 61 GPNGSGKSTLLRLIAGVFPATSGRVEISGNIVPLLGLGAGVNLDFVAADNISLLLRIAGR 120 GPNGSGKSTLLRLIAGV+PATSGR+E+ G ++PLLGL AG NLD VA DNISLLLRI GR Sbjct: 61 GPNGSGKSTLLRLIAGVYPATSGRIEVRGRVMPLLGLSAGANLDLVATDNISLLLRIGGR 120 Query: 121 KPTPAILDEIWAFTELEERMRRLPLRMFSSGMLMRVLFATATAFPADILLLDEWLSVVDE 180 +PTPAI+D+IWAFTELE+RMRRLPLR FSSGMLMRVLFATATAFPADILLLDEWLSVVDE Sbjct: 121 RPTPAIIDDIWAFTELEDRMRRLPLRTFSSGMLMRVLFATATAFPADILLLDEWLSVVDE 180 Query: 181 NFSAKAEQRLRKMVETAAIVIIASHDHALLRRTCNSIINLDRGRIASTVALDAPAPHHLE 240 FSAKAE+RL +V+ AAIV++ASHD LLRR CN I+ LDRGRI + Sbjct: 181 RFSAKAERRLLGLVDGAAIVMLASHDQELLRRVCNRIVPLDRGRIVGAEGGGQTDRSARK 240 Query: 241 LREISA 246 L EI A Sbjct: 241 LEEICA 246 >ref|YP_002546388.1| polysaccharide ABC transporter [Agrobacterium radiobacter K84] gb|ACM28454.1| polysaccharide ABC transporter [Agrobacterium radiobacter K84] Length = 248 Score = 265 bits (676), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 129/231 (55%), Positives = 164/231 (70%) Query: 1 MASIHLRDVCLDYPLYGAYDFSLKRRLLGRLFRQTSEMRTIRAVDGISIEAKAGARIGLA 60 MA+I L+ V LDYP+Y D SLKR LL T + IRA+ I E KAG RIGL Sbjct: 1 MATITLKKVTLDYPIYDLNDKSLKRLLLSAAGGSTEKTAVIRALHEIDFEVKAGERIGLY 60 Query: 61 GPNGSGKSTLLRLIAGVFPATSGRVEISGNIVPLLGLGAGVNLDFVAADNISLLLRIAGR 120 GPNGSGK+TLLR IAG+FP + G + ++G + PLLGL G N++ A DNI LLLR+ G Sbjct: 61 GPNGSGKTTLLRTIAGIFPISGGNISVTGQMTPLLGLAIGANMEISAEDNIKLLLRVDGI 120 Query: 121 KPTPAILDEIWAFTELEERMRRLPLRMFSSGMLMRVLFATATAFPADILLLDEWLSVVDE 180 KPT ++D IW FT+L+E+MRR+PLR FSSGMLMRVLF+ +TAF +ILLLDEWLSVVDE Sbjct: 121 KPTKELVDSIWEFTDLDEKMRRMPLRTFSSGMLMRVLFSVSTAFSPEILLLDEWLSVVDE 180 Query: 181 NFSAKAEQRLRKMVETAAIVIIASHDHALLRRTCNSIINLDRGRIASTVAL 231 FS KAE+R+ +V + I+IIASH+ +L R C I+ L++G I S A+ Sbjct: 181 TFSKKAERRMEDLVSRSKILIIASHNMKMLERVCTRIVRLEQGHIKSDEAV 231 >gb|EDZ38162.1| ABC transporter ATP-binding protein [Leptospirillum sp. Group II '5-way CG'] Length = 235 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 96/235 (40%), Positives = 151/235 (64%), Gaps = 8/235 (3%) Query: 1 MASIHLRDVCLDYPLYGAYDFSLKRRLL-----GRLFRQTSEMRTIRAVDGISIEAKAGA 55 MA I +C+DYP++ A SLK+ LL GR+ R+ + T+RA+DGI ++ + G Sbjct: 1 MAYIKGEKICVDYPIFNAPHRSLKKNLLRVATGGRISREAGKGVTVRALDGIDLDIREGD 60 Query: 56 RIGLAGPNGSGKSTLLRLIAGVFPATSGRVEISGNIVPLLGLGAGVNLDFVAADNISL-- 113 R+GL G NGSGKSTLLR++AGV+ T+G +++ G + LL + G++ + +NI L Sbjct: 61 RVGLTGHNGSGKSTLLRVLAGVYEPTAGSLDVQGRVASLLDISIGMDFEASGLENIFLRG 120 Query: 114 LLRIAGRKPTPAILDEIWAFTELEERMRRLPLRMFSSGMLMRVLFATATAFPADILLLDE 173 LL + L+EI +F+EL E + +P+R +SSGM+MR+ F+ AT+ ADILL+DE Sbjct: 121 LLLGLSKTEVEKKLEEITSFSELGEYID-MPVRTYSSGMVMRLAFSIATSIEADILLMDE 179 Query: 174 WLSVVDENFSAKAEQRLRKMVETAAIVIIASHDHALLRRTCNSIINLDRGRIAST 228 WLSV D +F KAE R++ ++ I+++ASH +L+ C ++ L+ G+IA + Sbjct: 180 WLSVGDADFVKKAEDRMKSLIHRTPILVMASHSKEILQEVCTRVMRLEGGKIACS 234 >emb|CCD29568.1| O-antigen export system ATP-binding protein rfbE [Candidatus Glomeribacter gigasporarum BEG34] Length = 237 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 97/234 (41%), Positives = 151/234 (64%), Gaps = 8/234 (3%) Query: 1 MASIHLRDVCLDYPLYGAYDFSLKRRLL-----GRLFRQTSEMRTIRAVDGISIEAKAGA 55 MA IH++ + +D+P+YGA SLK+ LL G++ + ++ ++A+D IS++ KAG Sbjct: 1 MARIHIKRLQIDFPIYGATHRSLKKSLLNLGTGGKISTLSEKITVVKALDDISLDVKAGC 60 Query: 56 RIGLAGPNGSGKSTLLRLIAGVFPATSGRVEISGNIVPLLGLGAGVNLDFVAADNISLLL 115 R+GL G NGSGKSTLL+++AGV+ T G+V + G + LL + G++ + +NI L Sbjct: 61 RLGLLGHNGSGKSTLLKVLAGVYLPTGGQVCVEGQVAALLDISLGMDDEASGYENILLRG 120 Query: 116 RIAGRKPTP--AILDEIWAFTELEERMRRLPLRMFSSGMLMRVLFATATAFPADILLLDE 173 G P + ++ I + L E + LP+R +S+GM MR+ FA +T+ ADILL+DE Sbjct: 121 VYLGVPPKQMQSKVELIAEESGLGEYLH-LPIRTYSTGMRMRLGFAISTSIEADILLMDE 179 Query: 174 WLSVVDENFSAKAEQRLRKMVETAAIVIIASHDHALLRRTCNSIINLDRGRIAS 227 WLSV D F KA Q+L+K+++ A I+++ASH L+ + CN +I L+RGRI S Sbjct: 180 WLSVGDAEFKEKAGQKLQKIIQKAKILVLASHQEELIHQICNRVITLERGRIVS 233