BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0213.p         (141 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771523.1| hypothetical protein blr4883 [Bradyrhizobium ja...   199   2e-49
ref|ZP_01615053.1| hypothetical protein GP2143_12811 [marine gam...   105   3e-21
ref|YP_002130820.1| hypothetical protein PHZ_c1980 [Phenylobacte...    97   1e-18
ref|YP_001413734.1| globin [Parvibaculum lavamentivorans DS-1] >...    96   1e-18
ref|YP_759630.1| globin domain-containing protein [Hyphomonas ne...    87   7e-16

>ref|NP_771523.1| hypothetical protein blr4883 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50148.1| blr4883 [Bradyrhizobium japonicum USDA 110]
          Length = 139

 Score =  199 bits (505), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/130 (74%), Positives = 109/130 (83%)

Query: 1   MTPSSNPIERSFELAAAACDDLTPFVYRRLFREHPETQAMFRTEGSEPVKGAMLQLTIEA 60
           MT S NPIE+SFE AA+ C DLTP VYRRLF EHPET+AMFR++GSE VKG+ML LTIEA
Sbjct: 6   MTISPNPIEQSFERAASRCADLTPLVYRRLFDEHPETRAMFRSQGSELVKGSMLALTIEA 65

Query: 61  ILDFAGERRGHFRLIESEVFSHDAYGTPRELFVAFFAMIADSLRDILGEQWTAEIDAAWH 120
           ILDFAG R GHFRLI  EV SHDAYGTPRELF+AFFA+I D+LRD+LG+ W+AEI  AW 
Sbjct: 66  ILDFAGTRSGHFRLIACEVVSHDAYGTPRELFIAFFAVIRDTLRDLLGDAWSAEIAQAWD 125

Query: 121 TLLGDIEAIV 130
           TLL DIEA V
Sbjct: 126 TLLTDIEAYV 135


>ref|ZP_01615053.1| hypothetical protein GP2143_12811 [marine gamma proteobacterium
           HTCC2143]
 gb|EAW32136.1| hypothetical protein GP2143_12811 [marine gamma proteobacterium
           HTCC2143]
          Length = 135

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 75/132 (56%)

Query: 5   SNPIERSFELAAAACDDLTPFVYRRLFREHPETQAMFRTEGSEPVKGAMLQLTIEAILDF 64
           ++ I    E     C D T  VY RLF  +PE + +F  +G++ VKG ML   ++ I+DF
Sbjct: 3   ADQIVSCLEQVGDRCKDPTALVYERLFSANPEMKPLFIMDGNDAVKGQMLFQVLDGIIDF 62

Query: 65  AGERRGHFRLIESEVFSHDAYGTPRELFVAFFAMIADSLRDILGEQWTAEIDAAWHTLLG 124
            G+RR    L  SE+ +HD  G P  +F  FF  I ++ RDI+G  WTAE D AW  LL 
Sbjct: 63  VGDRRYAETLFLSELINHDIIGVPPRVFSTFFRTIMETFRDIMGADWTAEFDQAWAQLLS 122

Query: 125 DIEAIVLQQKHL 136
           D++ ++ ++  +
Sbjct: 123 DLDEMIREKAEV 134


>ref|YP_002130820.1| hypothetical protein PHZ_c1980 [Phenylobacterium zucineum HLK1]
 gb|ACG78391.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 165

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 2/126 (1%)

Query: 5   SNPIERSFELAAAACDDLTPFVYRRLFREHPETQAMFRTEGSEPVKGAMLQLTIEAILDF 64
           S  + RS +L A    D  P VYRRLF   PE +A F  + +  V+G ML +  + +LD 
Sbjct: 39  SEAVARSLDLLAERAGDPAPLVYRRLFEAFPEMEAQFVRDTTGAVRGEMLAVAFQCVLDL 98

Query: 65  AGERRGHFRLIESEVFSHDAYGTPRELFVAFFAMIADSLRDILGEQWTAEIDAAWHTLLG 124
            G    +  LI SE  +H+ +G P E F +FF ++ ++ R ++GE WTAE++A W  LL 
Sbjct: 99  DGGYAAN--LIRSERVNHEGFGVPPEAFASFFPIVMETTRAVVGEDWTAEMEAGWRALLA 156

Query: 125 DIEAIV 130
            +E +V
Sbjct: 157 RLEGLV 162


>ref|YP_001413734.1| globin [Parvibaculum lavamentivorans DS-1]
 gb|ABS64077.1| globin [Parvibaculum lavamentivorans DS-1]
          Length = 145

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 70/123 (56%)

Query: 8   IERSFELAAAACDDLTPFVYRRLFREHPETQAMFRTEGSEPVKGAMLQLTIEAILDFAGE 67
           IE+S E  A    D    VY RLF + PE +AMF  +    V+G ML   ++ + DF G 
Sbjct: 11  IEKSIERVADVAGDPASHVYARLFAQQPEMEAMFVLDTDGNVRGHMLSEALDCVFDFLGP 70

Query: 68  RRGHFRLIESEVFSHDAYGTPRELFVAFFAMIADSLRDILGEQWTAEIDAAWHTLLGDIE 127
           R     LI+SE+ +H   G P  +F  FF ++ ++ R++LG +WTAE DAAW  LLG+ +
Sbjct: 71  RAYAPVLIQSELTNHSNLGVPPAVFATFFRVVMETFRELLGAEWTAETDAAWAKLLGEFD 130

Query: 128 AIV 130
             +
Sbjct: 131 TTI 133


>ref|YP_759630.1| globin domain-containing protein [Hyphomonas neptunium ATCC 15444]
 gb|ABI77861.1| globin domain protein [Hyphomonas neptunium ATCC 15444]
          Length = 129

 Score = 87.4 bits (215), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 66/127 (51%)

Query: 3   PSSNPIERSFELAAAACDDLTPFVYRRLFREHPETQAMFRTEGSEPVKGAMLQLTIEAIL 62
           P ++ I  +FE AA AC D  P +Y RLF   P+ + +F  +    V+G+ML+   EAIL
Sbjct: 2   PDADIILSTFERAAQACADPAPLIYARLFELRPDFKPLFDMDTDGGVRGSMLETCFEAIL 61

Query: 63  DFAGERRGHFRLIESEVFSHDAYGTPRELFVAFFAMIADSLRDILGEQWTAEIDAAWHTL 122
                      +I +  FSH  YG   E F   FA I D  RD+LG +WT   +A W  L
Sbjct: 62  GVIEGASSQRVIISAARFSHGGYGVVDEEFDIMFASIRDVFRDLLGARWTGTEEAQWAIL 121

Query: 123 LGDIEAI 129
           L +I AI
Sbjct: 122 LKEIAAI 128