BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0204.p         (102 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001990544.1| hypothetical protein Rpal_1535 [Rhodopseudom...   186   1e-45
ref|YP_483831.1| hypothetical protein RPB_0209 [Rhodopseudomonas...   186   1e-45
ref|NP_946669.1| hypothetical protein RPA1320 [Rhodopseudomonas ...   184   4e-45
ref|ZP_08628279.1| hypothetical protein CSIRO_1352 [Bradyrhizobi...   183   9e-45
ref|NP_105467.1| hypothetical protein mlr4646 [Mesorhizobium lot...   177   6e-43

>ref|YP_001990544.1| hypothetical protein Rpal_1535 [Rhodopseudomonas palustris TIE-1]
 gb|ACF00069.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 102

 Score =  186 bits (471), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/101 (86%), Positives = 93/101 (92%)

Query: 1   MTKGCTHIAGIQDVTPSALGCEECLKSGSRWLHLRICRTCGHVGCCDDSPNRHATAHFHA 60
           M+KGC HIAGI+DVTPSALGCEECLK GS W+HLRICRTCGHVGCCD+S +RHAT HFHA
Sbjct: 1   MSKGCKHIAGIRDVTPSALGCEECLKIGSAWVHLRICRTCGHVGCCDESLHRHATRHFHA 60

Query: 61  TGHPVIEGYDPPEGWGWCYVDEVLFDLSKRKTPHDGPIPRY 101
           T HP+IEGYDPPEGWGWCYVDEVLFDLS R TPHDGPIPRY
Sbjct: 61  TAHPIIEGYDPPEGWGWCYVDEVLFDLSDRMTPHDGPIPRY 101


>ref|YP_483831.1| hypothetical protein RPB_0209 [Rhodopseudomonas palustris HaA2]
 gb|ABD04920.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 102

 Score =  186 bits (471), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 85/101 (84%), Positives = 95/101 (94%)

Query: 1   MTKGCTHIAGIQDVTPSALGCEECLKSGSRWLHLRICRTCGHVGCCDDSPNRHATAHFHA 60
           M+KGCTHIAGI+DVTPSALGCEECLK GS W+HLRICRTCGHVGCCD+SP++HAT HFHA
Sbjct: 1   MSKGCTHIAGIRDVTPSALGCEECLKIGSIWVHLRICRTCGHVGCCDESPHKHATRHFHA 60

Query: 61  TGHPVIEGYDPPEGWGWCYVDEVLFDLSKRKTPHDGPIPRY 101
           T HP+IEGYDPPEGWGWCYVD+V+FDLS R TPH+GPIPRY
Sbjct: 61  TQHPIIEGYDPPEGWGWCYVDQVMFDLSDRMTPHNGPIPRY 101


>ref|NP_946669.1| hypothetical protein RPA1320 [Rhodopseudomonas palustris CGA009]
 pdb|2IDA|A Chain A, Solution Nmr Structure Of Protein Rpa1320 From
           Rhodopseudomonas Palustris. Northeast Structural
           Genomics Consortium Target Rpt3; Ontario Center For
           Structural Proteomics Target Rp1313.
 emb|CAE26762.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 102

 Score =  184 bits (467), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 85/101 (84%), Positives = 93/101 (92%)

Query: 1   MTKGCTHIAGIQDVTPSALGCEECLKSGSRWLHLRICRTCGHVGCCDDSPNRHATAHFHA 60
           MT GC H+AGI+ VTPSALGCEECLK GS W+HLRICRTCGHVGCCDDSP++HAT HFHA
Sbjct: 1   MTMGCRHVAGIRTVTPSALGCEECLKIGSPWVHLRICRTCGHVGCCDDSPHKHATRHFHA 60

Query: 61  TGHPVIEGYDPPEGWGWCYVDEVLFDLSKRKTPHDGPIPRY 101
           TGHP+IEGYDPPEGWGWCYVDEV+FDLS R TPH+GPIPRY
Sbjct: 61  TGHPIIEGYDPPEGWGWCYVDEVMFDLSDRMTPHNGPIPRY 101


>ref|ZP_08628279.1| hypothetical protein CSIRO_1352 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP09188.1| hypothetical protein CSIRO_1352 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 100

 Score =  183 bits (464), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 84/98 (85%), Positives = 89/98 (90%)

Query: 5   CTHIAGIQDVTPSALGCEECLKSGSRWLHLRICRTCGHVGCCDDSPNRHATAHFHATGHP 64
           C HIA I DVTPSALGCEECLK+G  WLHLRICRTCGHVGCCD SPN+HAT HFHAT HP
Sbjct: 3   CKHIAQINDVTPSALGCEECLKTGDVWLHLRICRTCGHVGCCDSSPNKHATKHFHATQHP 62

Query: 65  VIEGYDPPEGWGWCYVDEVLFDLSKRKTPHDGPIPRYD 102
           VIEGYDPPEGWGWCYVD+V+FDLS RKTPH+GPIPRYD
Sbjct: 63  VIEGYDPPEGWGWCYVDQVMFDLSSRKTPHNGPIPRYD 100


>ref|NP_105467.1| hypothetical protein mlr4646 [Mesorhizobium loti MAFF303099]
 dbj|BAB51253.1| mlr4646 [Mesorhizobium loti MAFF303099]
          Length = 103

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 82/101 (81%), Positives = 86/101 (85%)

Query: 1   MTKGCTHIAGIQDVTPSALGCEECLKSGSRWLHLRICRTCGHVGCCDDSPNRHATAHFHA 60
           M   C H AGI+DVTPSALGCEECLKSGS W+HLR+CRTCGHVGCCDDSPNRHAT HFHA
Sbjct: 2   MADECRHAAGIKDVTPSALGCEECLKSGSWWVHLRLCRTCGHVGCCDDSPNRHATKHFHA 61

Query: 61  TGHPVIEGYDPPEGWGWCYVDEVLFDLSKRKTPHDGPIPRY 101
           T HPVIEGYDPPEGWGWCYVDEV  DL  R TP  GPIPR+
Sbjct: 62  TSHPVIEGYDPPEGWGWCYVDEVFLDLGDRTTPQSGPIPRF 102