BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0203.p (166 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767890.1| hypothetical protein blr1250 [Bradyrhizobium ja... 213 9e-54 ref|YP_487953.1| hypothetical protein RPB_4355 [Rhodopseudomonas... 151 3e-35 ref|YP_783391.1| hypothetical protein RPE_4491 [Rhodopseudomonas... 142 2e-32 ref|ZP_08407279.1| hypothetical protein HGR_15444 [Hylemonella g... 137 5e-31 ref|ZP_08628281.1| hypothetical protein CSIRO_1354 [Bradyrhizobi... 135 2e-30 >ref|NP_767890.1| hypothetical protein blr1250 [Bradyrhizobium japonicum USDA 110] dbj|BAC46515.1| blr1250 [Bradyrhizobium japonicum USDA 110] Length = 191 Score = 213 bits (541), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 129/161 (80%), Positives = 143/161 (88%), Gaps = 3/161 (1%) Query: 6 LVHVIISLIAIVAGVLVMFGLLGSRAMPGLTAIFLVLTILTSATGFVIPPLVTEKLLPSH 65 +VHVIISLIAIVAG++VMFGLLGS+ MPGLTAIFL+ TILTSATGF+ P ++LLPSH Sbjct: 34 MVHVIISLIAIVAGLVVMFGLLGSKPMPGLTAIFLLFTILTSATGFLFP---FKELLPSH 90 Query: 66 IIGGLSLVLLAIACIALYAMQLKGAWRPIYVVTAMVSLYLNVFVLVIQSFLKVPALQALA 125 IIG +SLVLLAIACIALY M+L G WRP+Y+VTAM+SLY NVFVLVIQSFLKVPAL ALA Sbjct: 91 IIGIISLVLLAIACIALYGMKLAGVWRPVYIVTAMISLYFNVFVLVIQSFLKVPALAALA 150 Query: 126 PAVPPNPPSGPVFAAVQGIVLVFFAVVIIGAWRRFRPVTFA 166 PAVPP PPSGPVFA VQGIVLVFF V+ IGAWRRFRPV FA Sbjct: 151 PAVPPAPPSGPVFAVVQGIVLVFFVVLTIGAWRRFRPVAFA 191 >ref|YP_487953.1| hypothetical protein RPB_4355 [Rhodopseudomonas palustris HaA2] gb|ABD09042.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 165 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/162 (56%), Positives = 112/162 (69%), Gaps = 8/162 (4%) Query: 1 MTTLVLVHVIISLIAIVAGVLVMFGLLGSRAMPGLTAIFLVLTILTSATGFVIPPLVTEK 60 +TT LVH IISLIAIVAG++ M GLLGSR++PG TA+FLV TILTSATGF+ P + Sbjct: 7 LTTFTLVHTIISLIAIVAGLVAMAGLLGSRSLPGWTALFLVTTILTSATGFLFPFF---Q 63 Query: 61 LLPSHIIGGLSLVLLAIACIALYAMQLKGAWRPIYVVTAMVSLYLNVFVLVIQSFLKVPA 120 LLPSHI+G +SLVLLA A IA Y + +G WR YVVTAM+SLYLNVFVL++Q+F K+ Sbjct: 64 LLPSHIVGIISLVLLAAAVIAYYGFRQRGYWRAGYVVTAMLSLYLNVFVLIVQAFQKIGP 123 Query: 121 LQALAPAVPPNPPSGPVFAAVQGIVLVFFAVVIIGAWRRFRP 162 L+ LAP PP F A Q I L+ I+ RR P Sbjct: 124 LRDLAPN-QNEPP----FLAAQAIALLMLVAAIVVGLRRGGP 160 >ref|YP_783391.1| hypothetical protein RPE_4491 [Rhodopseudomonas palustris BisA53] gb|ABJ08411.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 166 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/162 (56%), Positives = 110/162 (67%), Gaps = 8/162 (4%) Query: 1 MTTLVLVHVIISLIAIVAGVLVMFGLLGSRAMPGLTAIFLVLTILTSATGFVIPPLVTEK 60 + T LVHV+ISLIAI AG++ M GLL S + G TA+FLV TILTS TGF+ P Sbjct: 7 LATFTLVHVVISLIAIAAGLIAMVGLLTSNPLRGWTALFLVTTILTSVTGFMFP---FGA 63 Query: 61 LLPSHIIGGLSLVLLAIACIALYAMQLKGAWRPIYVVTAMVSLYLNVFVLVIQSFLKVPA 120 LLPSHI+G +SL+LLA A ALY +L G WRP+YVV A+ SLYLNVFVL++Q F KV Sbjct: 64 LLPSHIVGIISLLLLAAAVFALYGQRLAGYWRPVYVVAALTSLYLNVFVLIVQGFGKVSF 123 Query: 121 LQALAPAVPPNPPSGPVFAAVQGIVLVFFAVVIIGAWRRFRP 162 L ALAP PP F A QG L+FF +I+ A RRFRP Sbjct: 124 LNALAP-TQTEPP----FLAAQGATLIFFLAMIVLATRRFRP 160 >ref|ZP_08407279.1| hypothetical protein HGR_15444 [Hylemonella gracilis ATCC 19624] gb|EGI75610.1| hypothetical protein HGR_15444 [Hylemonella gracilis ATCC 19624] Length = 158 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 75/162 (46%), Positives = 104/162 (64%), Gaps = 8/162 (4%) Query: 1 MTTLVLVHVIISLIAIVAGVLVMFGLLGSRAMPGLTAIFLVLTILTSATGFVIPPLVTEK 60 +TT L+HV++S++ ++AG++V GL+ + G TA FL TI TS TG+ P K Sbjct: 5 LTTFTLIHVLLSVLGLIAGLVVAGGLVSGARLDGWTAFFLSTTIATSITGYGFP---APK 61 Query: 61 LLPSHIIGGLSLVLLAIACIALYAMQLKGAWRPIYVVTAMVSLYLNVFVLVIQSFLKVPA 120 LLPSHI+G +SL+ LA+ A YA +++G WR +YVVTA+ +LYLN FVL++Q F+K PA Sbjct: 62 LLPSHIVGAISLLALALCVYARYARKMQGGWRRVYVVTAITALYLNAFVLMVQLFVKTPA 121 Query: 121 LQALAPAVPPNPPSGPVFAAVQGIVLVFFAVVIIGAWRRFRP 162 L LAP P F Q ++LV F + AWRRFRP Sbjct: 122 LARLAPTQQETP-----FVLTQAVILVVFVWIGEKAWRRFRP 158 >ref|ZP_08628281.1| hypothetical protein CSIRO_1354 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09190.1| hypothetical protein CSIRO_1354 [Bradyrhizobiaceae bacterium SG-6C] Length = 154 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/159 (53%), Positives = 104/159 (65%), Gaps = 8/159 (5%) Query: 3 TLVLVHVIISLIAIVAGVLVMFGLLGSRAMPGLTAIFLVLTILTSATGFVIPPLVTEKLL 62 T + H+IIS+IAI G +V G+L S +P T FL+LTILTSATGF+ P KLL Sbjct: 2 TFTVFHLIISMIAIGLGFVVAGGILSSNRLPRWTLWFLILTILTSATGFLFP---FTKLL 58 Query: 63 PSHIIGGLSLVLLAIACIALYAMQLKGAWRPIYVVTAMVSLYLNVFVLVIQSFLKVPALQ 122 PSHI+ +SLVLLAIA ALY L G WR +YVVTAM++L+ NVFVL+ QSF KV L Sbjct: 59 PSHIVAIISLVLLAIAVYALYGKGLAGIWRTVYVVTAMLALWFNVFVLIAQSFQKVALLN 118 Query: 123 ALAPAVPPNPPSGPVFAAVQGIVLVFFAVVIIGAWRRFR 161 AP PP FA QGIVLVFF +I+ +RF+ Sbjct: 119 VYAPT-GAEPP----FAITQGIVLVFFIFLIVLGIKRFK 152