BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0199.p         (129 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770951.1| hypothetical protein blr4311 [Bradyrhizobium ja...   170   6e-41
ref|YP_001240161.1| hypothetical protein BBta_4198 [Bradyrhizobi...   158   3e-37
ref|ZP_08630066.1| DMT superfamily permease [Bradyrhizobiaceae b...   140   7e-32
gb|EGP56528.1| ABC transporter, membrane spanning protein [Agrob...   133   1e-29
ref|YP_004279312.1| hypothetical protein AGROH133_07383 [Agrobac...   132   1e-29

>ref|NP_770951.1| hypothetical protein blr4311 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49576.1| blr4311 [Bradyrhizobium japonicum USDA 110]
          Length = 303

 Score =  170 bits (431), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 87/120 (72%), Positives = 94/120 (78%)

Query: 1   MPSADNRIDRRDWGLLVLLSVLWGGSFFFNGVILRELPPLTLVLLRVVLGTIILLPLLRA 60
           MP  DNRID RDW LL +LS+LWGGSFFFN   LRELPPLTLV LRV LG  +LLPLL  
Sbjct: 1   MPPNDNRIDARDWSLLAVLSILWGGSFFFNSAGLRELPPLTLVFLRVALGAAVLLPLLHV 60

Query: 61  AGIEFPRGLSGWAPFAAMGLFNNVLPFALIVFGQTYIPSGLASILNATTPLFTVIVMAAA 120
            GI FP+G  GW PF  +GL NNV+PF+LIV GQT IPSGLASILNATTPLFTV VMA A
Sbjct: 61  QGISFPKGTLGWKPFFVIGLLNNVIPFSLIVIGQTIIPSGLASILNATTPLFTVTVMAMA 120


>ref|YP_001240161.1| hypothetical protein BBta_4198 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36255.1| putative membrane protein of unknown function with
           transport-associated domain [Bradyrhizobium sp. BTAi1]
          Length = 307

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 81/126 (64%), Positives = 99/126 (78%)

Query: 1   MPSADNRIDRRDWGLLVLLSVLWGGSFFFNGVILRELPPLTLVLLRVVLGTIILLPLLRA 60
           M S ++ +D RDW LL LLSVLW GSF FNG+ L+ELPPLTLVLLR+VL   ILLP+ R 
Sbjct: 1   MTSPNDSVDTRDWWLLGLLSVLWSGSFIFNGLALKELPPLTLVLLRIVLAAAILLPVARL 60

Query: 61  AGIEFPRGLSGWAPFAAMGLFNNVLPFALIVFGQTYIPSGLASILNATTPLFTVIVMAAA 120
            G+ FP+G++GW  F A+ LFNNV+PF LIV GQT+I SGLA++LNATTPLFT++VMAAA
Sbjct: 61  RGLGFPKGIAGWRAFFAVALFNNVVPFCLIVIGQTFITSGLAAVLNATTPLFTIVVMAAA 120

Query: 121 PAWRAS 126
              R S
Sbjct: 121 AEERLS 126


>ref|ZP_08630066.1| DMT superfamily permease [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07435.1| DMT superfamily permease [Bradyrhizobiaceae bacterium SG-6C]
          Length = 322

 Score =  140 bits (353), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 77/119 (64%), Positives = 95/119 (79%)

Query: 1   MPSADNRIDRRDWGLLVLLSVLWGGSFFFNGVILRELPPLTLVLLRVVLGTIILLPLLRA 60
           +   + R+D RDW  LV LSVLWGG+FFF GV L+ELPPLTLV +R+ L T++LLPLL A
Sbjct: 18  LTETELRMDERDWSRLVFLSVLWGGTFFFTGVALKELPPLTLVCIRLSLATLMLLPLLWA 77

Query: 61  AGIEFPRGLSGWAPFAAMGLFNNVLPFALIVFGQTYIPSGLASILNATTPLFTVIVMAA 119
             I FPRG++GW PFA M L NNV+PF+LIV GQTYIPSG A+++NATTP+FTV+V AA
Sbjct: 78  NRIPFPRGIAGWWPFAVMALINNVMPFSLIVMGQTYIPSGTAAVVNATTPVFTVLVAAA 136


>gb|EGP56528.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens F2]
          Length = 310

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 84/112 (75%)

Query: 5   DNRIDRRDWGLLVLLSVLWGGSFFFNGVILRELPPLTLVLLRVVLGTIILLPLLRAAGIE 64
             ++D  +WG+LV LS+LWGGSFFF G+ ++ELPP+T+V LRV +  + LL + R  G+ 
Sbjct: 4   QKQMDAGEWGMLVALSLLWGGSFFFIGIAVKELPPVTIVTLRVSMAAVALLIVCRIMGLH 63

Query: 65  FPRGLSGWAPFAAMGLFNNVLPFALIVFGQTYIPSGLASILNATTPLFTVIV 116
            PR  + W  F  MGL NN++PF LIV+GQT+I SGLASILNATTPLFTVIV
Sbjct: 64  LPRQWAVWRAFFGMGLLNNIIPFCLIVWGQTHIASGLASILNATTPLFTVIV 115


>ref|YP_004279312.1| hypothetical protein AGROH133_07383 [Agrobacterium sp. H13-3]
 gb|ADY64992.1| hypothetical protein AGROH133_07383 [Agrobacterium sp. H13-3]
          Length = 310

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 83/112 (74%)

Query: 5   DNRIDRRDWGLLVLLSVLWGGSFFFNGVILRELPPLTLVLLRVVLGTIILLPLLRAAGIE 64
             ++D  +WG+LV LS+LWGGSFFF G+ ++ELPP+T+V LRV L    LL + R  G+ 
Sbjct: 4   QKQMDASEWGMLVALSLLWGGSFFFIGIAVKELPPVTIVTLRVSLAAAALLIVCRIMGLH 63

Query: 65  FPRGLSGWAPFAAMGLFNNVLPFALIVFGQTYIPSGLASILNATTPLFTVIV 116
            PR  + W  F  MGL NN++PF LIV+GQT+I SGLASILNATTPLFTVIV
Sbjct: 64  LPRQWAVWRAFFGMGLLNNIIPFCLIVWGQTHIASGLASILNATTPLFTVIV 115