BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0200.0197.p (322 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240163.1| peptide chain release factor 2 [Bradyrhizobi... 620 e-176 ref|YP_001205523.1| peptide chain release factor 2 [Bradyrhizobi... 618 e-175 ref|YP_004109372.1| peptide chain release factor 2 [Rhodopseudom... 602 e-170 ref|ZP_01046441.1| peptide chain release factor 2 [Nitrobacter s... 597 e-168 ref|YP_577099.1| peptide chain release factor 2 [Nitrobacter ham... 592 e-167 >ref|YP_001240163.1| peptide chain release factor 2 [Bradyrhizobium sp. BTAi1] gb|ABQ36257.1| bacterial peptide chain release factor 2 (bRF-2) [Bradyrhizobium sp. BTAi1] Length = 323 Score = 620 bits (1600), Expect = e-176, Method: Compositional matrix adjust. Identities = 300/323 (92%), Positives = 315/323 (97%), Gaps = 1/323 (0%) Query: 1 MQERTSLEDALSGIGKVERELEDNIGMIELGEAENDEGVVTEAEKALKDLKKEVARRELE 60 MQERTSLED+L+GIGKVER+L DNI MIELGEAEND GVVTEAE ALK LKK+VARRELE Sbjct: 1 MQERTSLEDSLTGIGKVERDLSDNIEMIELGEAENDAGVVTEAENALKALKKDVARRELE 60 Query: 61 ALLSGEADKFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEFLEESQGEEAGI 120 ALLSGEADKFD+YLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIE+LEE+QGEEAGI Sbjct: 61 ALLSGEADKFDTYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120 Query: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIEIKE 180 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSV IFPV+DDSIKI+IKE Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVCQAGRSQHKNRAQAWDMLRARLY 240 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTG+AVVCQAGRSQHKNRAQAWDMLRARLY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 EIELKKREE+AAADQAAKT+IGWGHQIRSYVLQPYQMVKDLRTGVQTSDT+GVLDGDLDE Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 301 FMAATLAQRAFGTGPG-SVEDVD 322 FMAATLAQRAFGT PG ++EDVD Sbjct: 301 FMAATLAQRAFGTTPGAAIEDVD 323 >ref|YP_001205523.1| peptide chain release factor 2 [Bradyrhizobium sp. ORS 278] emb|CAL77297.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS 278] Length = 323 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 300/323 (92%), Positives = 312/323 (96%), Gaps = 1/323 (0%) Query: 1 MQERTSLEDALSGIGKVERELEDNIGMIELGEAENDEGVVTEAEKALKDLKKEVARRELE 60 MQERTSLED+L+GIGKVEREL DNI MIELGEAEND GVV EAE ALK+LKKEVARRELE Sbjct: 1 MQERTSLEDSLTGIGKVERELSDNIEMIELGEAENDAGVVAEAENALKELKKEVARRELE 60 Query: 61 ALLSGEADKFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEFLEESQGEEAGI 120 ALLSGEADKFD+YLEVHAGAGGTESQDWA MLLRMYTRWAE HGFK+E+LEES GEEAGI Sbjct: 61 ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEYLEESLGEEAGI 120 Query: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIEIKE 180 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKI+IKE Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKE 180 Query: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVCQAGRSQHKNRAQAWDMLRARLY 240 SDVR DTMRSGGAGGQHVNKTESAVRLTHIPTG+AVVCQAGRSQHKNRAQAWDMLRARLY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 EIELKKREE+AAADQAAKT+IGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVL+GDLDE Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGDLDE 300 Query: 301 FMAATLAQRAFGTGPGSV-EDVD 322 FMAATLAQRAFGT PG+V EDVD Sbjct: 301 FMAATLAQRAFGTSPGAVIEDVD 323 >ref|YP_004109372.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1] gb|ADU44639.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1] Length = 376 Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust. Identities = 302/322 (93%), Positives = 313/322 (97%) Query: 1 MQERTSLEDALSGIGKVERELEDNIGMIELGEAENDEGVVTEAEKALKDLKKEVARRELE 60 MQERTSLEDAL+GIGKVEREL DNI MIELGEAE DEG+V EAE+ALK LKKEVARRELE Sbjct: 55 MQERTSLEDALTGIGKVERELTDNIDMIELGEAEGDEGIVKEAEEALKALKKEVARRELE 114 Query: 61 ALLSGEADKFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEFLEESQGEEAGI 120 ALLSGEAD+FD+YLEVHAGAGGTESQDWA MLLRMY RWAEKHGFKIE+LEES GEEAGI Sbjct: 115 ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESDGEEAGI 174 Query: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIEIKE 180 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKI+IKE Sbjct: 175 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKE 234 Query: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVCQAGRSQHKNRAQAWDMLRARLY 240 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTG+AVVCQAGRSQHKNRAQAWDMLRARLY Sbjct: 235 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 294 Query: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 EIELKKREEQAAADQAAKT+IGWGHQIRSYVLQPYQMVKDLRTGVQTSDT+GVLDGDLDE Sbjct: 295 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 354 Query: 301 FMAATLAQRAFGTGPGSVEDVD 322 FMAATLAQRAFG GPG+VEDVD Sbjct: 355 FMAATLAQRAFGGGPGAVEDVD 376 >ref|ZP_01046441.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A] gb|EAQ35531.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A] Length = 322 Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust. Identities = 295/322 (91%), Positives = 313/322 (97%) Query: 1 MQERTSLEDALSGIGKVERELEDNIGMIELGEAENDEGVVTEAEKALKDLKKEVARRELE 60 MQERTSLED+L+GIGKVERELED IGMIELGEAEND+ V+TE+E ALK L+KEVARRELE Sbjct: 1 MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAVITESENALKTLRKEVARRELE 60 Query: 61 ALLSGEADKFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEFLEESQGEEAGI 120 ALLSGEAD+FD+YLEVHAGAGGTESQDWAQMLLRMY RWAEK GFK+E+LEE+ GEEAGI Sbjct: 61 ALLSGEADRFDTYLEVHAGAGGTESQDWAQMLLRMYARWAEKRGFKVEYLEETPGEEAGI 120 Query: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIEIKE 180 KSAT+QISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSV IFPV+DDSIKI+IKE Sbjct: 121 KSATVQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVCQAGRSQHKNRAQAWDMLRARLY 240 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTG+AVVCQAGRSQHKNRAQAWDMLRARLY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 EIELKKREEQAAADQAAKT+IGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 Query: 301 FMAATLAQRAFGTGPGSVEDVD 322 FMAATLAQRAFGT PG+VEDV+ Sbjct: 301 FMAATLAQRAFGTTPGAVEDVE 322 >ref|YP_577099.1| peptide chain release factor 2 [Nitrobacter hamburgensis X14] gb|ABE62639.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter hamburgensis X14] Length = 322 Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust. Identities = 292/322 (90%), Positives = 311/322 (96%) Query: 1 MQERTSLEDALSGIGKVERELEDNIGMIELGEAENDEGVVTEAEKALKDLKKEVARRELE 60 MQERTSLED+L+GIGKVERELED IGMIELGEAEND+ +V ++E ALK+LKKEVARRELE Sbjct: 1 MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAIVNDSENALKNLKKEVARRELE 60 Query: 61 ALLSGEADKFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEFLEESQGEEAGI 120 ALLSGEAD+F++YLEVHAGAGGTESQDWA MLLRMY RWAEK GFKIE+LEE+ GEEAGI Sbjct: 61 ALLSGEADRFNTYLEVHAGAGGTESQDWASMLLRMYARWAEKRGFKIEYLEETPGEEAGI 120 Query: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIEIKE 180 KSATIQ+SGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSV IFPV+DDSIKI+IKE Sbjct: 121 KSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVCQAGRSQHKNRAQAWDMLRARLY 240 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTG+AVVCQAGRSQHKNRAQAWDMLRARLY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 +IELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE Sbjct: 241 QIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 Query: 301 FMAATLAQRAFGTGPGSVEDVD 322 FMAATLAQ+AFG PG+VEDVD Sbjct: 301 FMAATLAQKAFGITPGAVEDVD 322