BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0189.p         (102 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773783.1| hypothetical protein bll7143 [Bradyrhizobium ja...    72   2e-11
ref|YP_001239193.1| hypothetical protein BBta_3174 [Bradyrhizobi...    50   8e-05
ref|YP_001240194.1| hypothetical protein BBta_4232 [Bradyrhizobi...    49   3e-04
ref|YP_001755142.1| hypothetical protein Mrad2831_2464 [Methylob...    48   6e-04
ref|YP_001205487.1| hypothetical protein BRADO3479 [Bradyrhizobi...    47   7e-04

>ref|NP_773783.1| hypothetical protein bll7143 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52408.1| bll7143 [Bradyrhizobium japonicum USDA 110]
          Length = 108

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 62/110 (56%), Gaps = 10/110 (9%)

Query: 1   MAGFKAVAAVALLVGMTFTPVAAQM----SEPAYFDAQNPGRSAINGGALTPWGEAQEAA 56
           M G K +AAVA+L  +T T   AQ     S P  ++A+NP R+ +NG  LTP G      
Sbjct: 1   MTGLKILAAVAVLSALTATTAYAQSGFASSHPDTYEAENPNRN-LNG-TLTPAGRLGLEL 58

Query: 57  RHGGNPAN-AYGAMPAAE---PTSACARYRSFDPASGTFLGRDGRRHPCQ 102
             G  PA  A  AM  A+     S   RYRSFDPA+GT+LG DG RHPC+
Sbjct: 59  PDGAAPAQGADSAMARADGAASRSCSGRYRSFDPATGTYLGLDGNRHPCR 108


>ref|YP_001239193.1| hypothetical protein BBta_3174 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35287.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 135

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 28/33 (84%), Gaps = 1/33 (3%)

Query: 71  AAEPTSACA-RYRSFDPASGTFLGRDGRRHPCQ 102
           A+E   +CA RYRS+DPASGT+LG+DGRRH C+
Sbjct: 103 ASESQVSCAQRYRSYDPASGTYLGKDGRRHVCR 135


>ref|YP_001240194.1| hypothetical protein BBta_4232 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36288.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 235

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 23/29 (79%)

Query: 73  EPTSACARYRSFDPASGTFLGRDGRRHPC 101
           +P+    RYRS+DPASGT+LG DG RHPC
Sbjct: 206 DPSYCARRYRSYDPASGTYLGYDGLRHPC 234


>ref|YP_001755142.1| hypothetical protein Mrad2831_2464 [Methylobacterium radiotolerans
           JCM 2831]
 gb|ACB24459.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 230

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 26/33 (78%), Gaps = 1/33 (3%)

Query: 71  AAEPTSACAR-YRSFDPASGTFLGRDGRRHPCQ 102
           A +   ACAR +RS+DP SGT+LGRDGRRH C+
Sbjct: 198 AVDDDRACARRFRSYDPQSGTYLGRDGRRHRCR 230


>ref|YP_001205487.1| hypothetical protein BRADO3479 [Bradyrhizobium sp. ORS 278]
 emb|CAL77261.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 174

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 23/30 (76%)

Query: 72  AEPTSACARYRSFDPASGTFLGRDGRRHPC 101
            +P+    RYRS+DPASGT+LG DG RHPC
Sbjct: 144 VDPSYCARRYRSYDPASGTYLGYDGIRHPC 173