BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0200.0186.p         (179 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772761.1| sulfite oxidase [Bradyrhizobium japonicum USDA ...   253   7e-66
ref|ZP_07027323.1| oxidoreductase molybdopterin binding [Afipia ...   225   3e-57
ref|YP_003066466.1| sulfite oxidase [Methylobacterium extorquens...   210   9e-53
ref|YP_001766614.1| oxidoreductase molybdopterin binding [Methyl...   182   1e-44
ref|YP_002495234.1| molybdopterin binding oxidoreductase [Methyl...   180   7e-44

>ref|NP_772761.1| sulfite oxidase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51386.1| bll6121 [Bradyrhizobium japonicum USDA 110]
          Length = 422

 Score =  253 bits (647), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 118/158 (74%), Positives = 135/158 (85%), Gaps = 4/158 (2%)

Query: 14  SRRRFLQAGAALAGGSAISGVAGSTALAEQGNNLPPNVPEWMKAPGDPMGSQPYGTPSVH 73
           +RRRFL AG+A  GG+    V G++  A + +NLPPNVPEWMKAPG+P G Q YG PS  
Sbjct: 15  TRRRFLTAGSAAVGGA----VLGTSTAAAETDNLPPNVPEWMKAPGEPTGGQLYGAPSPF 70

Query: 74  EKAVVKNISKTLPQYISASGRTPLQELDGIITPNGLFYERHHGGVPTIDPAEHRLVLHGM 133
           EK VVKNISK L QYISAS RTPLQELDGIITPNGLFYERHHGGVPTIDPA+HRL+LHG+
Sbjct: 71  EKGVVKNISKALKQYISASSRTPLQELDGIITPNGLFYERHHGGVPTIDPAQHRLMLHGL 130

Query: 134 VDRPLVFTMEDIRRFPSQSRIHFLECSGNPVYTKPYGK 171
           V+RPL+FT++D+RRFPS+SRIHFLECSGNP YTKPYGK
Sbjct: 131 VERPLIFTIDDLRRFPSESRIHFLECSGNPGYTKPYGK 168


>ref|ZP_07027323.1| oxidoreductase molybdopterin binding [Afipia sp. 1NLS2]
 gb|EFI51079.1| oxidoreductase molybdopterin binding [Afipia sp. 1NLS2]
          Length = 430

 Score =  225 bits (573), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 104/166 (62%), Positives = 130/166 (78%), Gaps = 3/166 (1%)

Query: 9   RVREASRRRFLQAGAALAGGSAISGVAGSTALAEQGN---NLPPNVPEWMKAPGDPMGSQ 65
           R   A+RR+F+ AG+A+ GG+AI+  +G  A A   +   N PPN+PEWMK PG  +GSQ
Sbjct: 10  RASAATRRQFIGAGSAMLGGAAIAVASGGKAAALDASADPNGPPNIPEWMKQPGADVGSQ 69

Query: 66  PYGTPSVHEKAVVKNISKTLPQYISASGRTPLQELDGIITPNGLFYERHHGGVPTIDPAE 125
            YGTPS  EK VV+N+ K L QY SAS RTPLQELDGIITPNG+FYERHHGG+P IDPA+
Sbjct: 70  IYGTPSPFEKKVVRNVPKKLKQYTSASSRTPLQELDGIITPNGVFYERHHGGIPEIDPAQ 129

Query: 126 HRLVLHGMVDRPLVFTMEDIRRFPSQSRIHFLECSGNPVYTKPYGK 171
           HRL++HG+V+RP++FTM+ IRR+PS+SRIHFLECSGNP +   Y K
Sbjct: 130 HRLMIHGLVERPMIFTMDQIRRYPSESRIHFLECSGNPGFEAIYSK 175


>ref|YP_003066466.1| sulfite oxidase [Methylobacterium extorquens DM4]
 emb|CAX22422.1| putative sulfite oxidase (soxC-like) [Methylobacterium extorquens
           DM4]
          Length = 447

 Score =  210 bits (534), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 99/155 (63%), Positives = 124/155 (80%), Gaps = 4/155 (2%)

Query: 14  SRRRFLQAGAALAGGSAISGVAGSTALAEQG---NNLPPNVPEWMKAPGDPMGSQPYGTP 70
           SRR+ L AG+AL GGS   GVA + A AE G   +N PPNVP WMK PG  +GSQ YGTP
Sbjct: 34  SRRQILAAGSALVGGSLAGGVA-TPARAEPGSGLDNTPPNVPRWMKKPGADVGSQLYGTP 92

Query: 71  SVHEKAVVKNISKTLPQYISASGRTPLQELDGIITPNGLFYERHHGGVPTIDPAEHRLVL 130
           S  EK V++N+ K   QY S++ RTPLQ+LDGIITPNGLFYERHHGG+P IDPA+HRL++
Sbjct: 93  SEFEKGVIRNVPKNGKQYTSSASRTPLQDLDGIITPNGLFYERHHGGIPAIDPAQHRLMI 152

Query: 131 HGMVDRPLVFTMEDIRRFPSQSRIHFLECSGNPVY 165
           HG+V+RPL+ TM+++RRFP++SRI+FLECSGNP +
Sbjct: 153 HGLVERPLLLTMDELRRFPTESRIYFLECSGNPGF 187


>ref|YP_001766614.1| oxidoreductase molybdopterin binding [Methylobacterium
           radiotolerans JCM 2831]
 gb|ACB27812.1| oxidoreductase molybdopterin binding [Methylobacterium
           radiotolerans JCM 2831]
          Length = 414

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 98/121 (80%)

Query: 51  VPEWMKAPGDPMGSQPYGTPSVHEKAVVKNISKTLPQYISASGRTPLQELDGIITPNGLF 110
           VPEWMK PG  +GSQ YG PS  E  V++N+ + L QYISAS RTPLQ+LDGI+TPNGLF
Sbjct: 41  VPEWMKIPGADVGSQTYGRPSRFEDGVIRNVPQGLKQYISASSRTPLQDLDGILTPNGLF 100

Query: 111 YERHHGGVPTIDPAEHRLVLHGMVDRPLVFTMEDIRRFPSQSRIHFLECSGNPVYTKPYG 170
           YERHHGG+P IDPA HRL++HG+V+ PL+ TMEDIRRFPS+S I+FLECSGNP +    G
Sbjct: 101 YERHHGGIPDIDPARHRLMIHGLVETPLILTMEDIRRFPSESHIYFLECSGNPGFEAIKG 160

Query: 171 K 171
           +
Sbjct: 161 R 161


>ref|YP_002495234.1| molybdopterin binding oxidoreductase [Methylobacterium nodulans ORS
           2060]
 gb|ACL62742.1| oxidoreductase molybdopterin binding [Methylobacterium nodulans ORS
           2060]
          Length = 429

 Score =  180 bits (457), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 79/119 (66%), Positives = 97/119 (81%)

Query: 53  EWMKAPGDPMGSQPYGTPSVHEKAVVKNISKTLPQYISASGRTPLQELDGIITPNGLFYE 112
           EWMKAPG  +GS+ YGTPS  EK VV+N+++ L QY SAS R PLQE DGIITPNGLFYE
Sbjct: 56  EWMKAPGADVGSELYGTPSRFEKEVVRNLARNLKQYTSASSRAPLQEFDGIITPNGLFYE 115

Query: 113 RHHGGVPTIDPAEHRLVLHGMVDRPLVFTMEDIRRFPSQSRIHFLECSGNPVYTKPYGK 171
           RHHGG+P IDPA+HRL++HG+V+ PL+ TM DIRRFPS+S I+F+ECSGNP +    G+
Sbjct: 116 RHHGGIPDIDPAQHRLMVHGLVEIPLLLTMNDIRRFPSESHIYFIECSGNPGFEAMNGR 174